Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neotoma_20lepida_20[genbank_20GCA_5F001675575.1_202016-06-23]
119,373 sequences; 2,353,855,022 total letters
Query= NC_031224.1
Length=59443
Score E
Sequences producing significant alignments: (Bits) Value
seq73029 87.8 7e-13
>seq73029
Length=1854
Score = 87.8 bits (96), Expect = 7e-13
Identities = 109/147 (74%), Gaps = 2/147 (1%)
Strand=Plus/Plus
Query 52110 ATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAA-GGTAAGCTTTC 52168
||||| || |||| |||||| | || | ||||||||||| | |||| || |||| ||
Sbjct 1389 ATGGCACTGCCTCCTTGCCATGCCCTCTGTCAATTCTATGT-GGTGAATGGGGAGCTGTC 1447
Query 52169 GTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAG 52228
||||| | || ||| |||| | || ||| | ||||||| || || |||||||||||
Sbjct 1448 TTGCCAGCTTTACCAGAGGTCAGGAGATATGGGCCTGGGCGTGCCCTTCAACATTGCCAG 1507
Query 52229 CTATTCCTTGCTGACGCATCTGATTGC 52255
|||| || |||| || | |||||||
Sbjct 1508 CTATGCCCTGCTCACNTACATGATTGC 1534
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 189826528583530
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |