Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ochotona_20princeps_20[refseq_20GCF_5F000292845.1_202012-08-27] 10,421 sequences; 2,229,840,584 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq11 194 2e-44 seq6 159 4e-34 seq4 136 5e-27 >seq11 Length=41765191 Score = 194 bits (214), Expect = 2e-44 Identities = 583/887 (66%), Gaps = 21/887 (2%) Strand=Plus/Plus Query 9487 CTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATAC 9546 || ||||| || |||| || |||||||| | | |||||| | || ||| | |||| Sbjct 15559641 CTGGTGTTCATCGTTGGTTTCTTGGGCAACACTATGGTGGTGGTGATCCTCACGAAATAC 15559700 Query 9547 ATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTA 9606 | || | | | || | || ||||| | ||||| ||| |||| || ||||||||||| Sbjct 15559701 AAGAGGCTTAGAATTATGACCAACATCTACCTGTTCAACCTGGCCATCTCTGACTTGCTC 15559760 Query 9607 TTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTATCATGATTGGACTTTT 9666 ||||| || ||| | || || ||||| |||||||| | | | || ||| ||| Sbjct 15559761 TTTCTCTTCACTCTTCCCTTCTGGATTCACTATATCAGGCGGAAA---GAGTGGGTGTTT 15559817 Query 9667 GGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTC 9726 | | | |||| || | ||| ||| ||| || | || ||||||| || || Sbjct 15559818 GACAACAGCATGTGCAAGTTCCTCTCGGGGTTGTATTCCCTGGGCTTGTACAGTGAGATC 15559877 Query 9727 TTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGC- 9785 |||| ||| |||||||| ||| | |||||||| || || | || |||| || ||| Sbjct 15559878 TTTTTCATAATCCTGCTGACAATGGACAGGTACCTGGCCATCGTGCATGCGGTGTTTGCC 15559937 Query 9786 -TTTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGG 9844 || ||| | | || || |||| ||| | | || |||| |||||| | | | Sbjct 15559938 CTTCGAGCTC--GCACGGTCACCTTTGGGGTCATCACAAGTGTCCTCACCTGGGTCTTCG 15559995 Query 9845 CAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCATGGACACCAAGATGACAATGGT-AGG 9903 ||||| | ||||||| |||||| |||| | | ||| | | || || Sbjct 15559996 CAGGGCTAGCAGCCCTCCCAGAATTTATCTTCCGAGAGTTCCATGGGGGGCCTGAAGAGT 15560055 Query 9904 GTTCAGTGTGATCCTTACTACCCAGAGATGTCTACAAATGTTTGGAGGCGCGCCCACGT- 9962 | || || ||| ||||| || | | | |||| || |||| Sbjct 15560056 CTACA-TGCAGCCCTGCATACCCCACGAACGAGGAAGAGGCCTGGAAGCATTTCCACACC 15560114 Query 9963 -TGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACT 10021 || ||| ||| ||| | | || || ||||||||||||| ||||| ||||||| | Sbjct 15560115 CTGAAAA--TGAATATCCTGGGACTTGTTCTGCCTCTGCTCATCATGGCCATCTGCTATT 15560172 Query 10022 ATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGC 10081 || ||| || | || ||| | ||| |||||| || |||| ||| || ||| ||| Sbjct 15560173 CTGGAATCATTAAAACGCTGCTCAGGTGCCCCAACAGAGCCAAGTGCAAAGCTATCCGGC 15560232 Query 10082 TCATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCC 10141 |||| ||| |||| ||| ||| || ||| |||| ||||||||||||||| | ||||| Sbjct 15560233 TCATTTTTCTCATAATGTTGGTCTTTTTCCTTTTCTGGACACCCTACAACCTAGTTCTGT 15560292 Query 10142 TACTGTCTACCTTTCACGCAAC--CCTTCTTAACCTGCAG-TGTGCATTGAGCAGTAACT 10198 | || ||| ||||||| ||| |||||| ||| |||| | | ||| || Sbjct 15560293 TTCTTTCTGCCTTTCA---AACTGTCTTCTTGGAGAACAGCTGTGAGTGCAACAGAAAGC 15560349 Query 10199 TGGACATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAG 10258 ||||| |||| || | | ||| | | || |||| ||||| || ||||||| Sbjct 15560350 TGGACCTGGCCAGGCAGGTGACAGAGGTGATCACCCACACCCACTGCTGTGTCAACCCTA 15560409 Query 10259 TGATCTACGCGTTCGTGGGGGAGAAGTT-TAGAAGACACCTGTACCACTTCTTCCACACC 10317 | ||||| || ||||| |||||||| || ||||| ||||| | ||||| ||||| | Sbjct 15560410 TCATCTATGCCTTCGTAGGGGAGAAATTCCAGAAG-TACCTGCATCACTTTTTCCATAGG 15560468 Query 10318 TACGTGGCCATCTACCTCTGCAAGTACATCCCCTTCCTGTCTGGTGA 10364 | || | ||||||||| |||| |||||||| ||||| || |||| Sbjct 15560469 CATGTAGGCATCTACCTGAGCAAATACATCCCATTCCTTCCTAGTGA 15560515 Score = 194 bits (214), Expect = 2e-44 Identities = 583/887 (66%), Gaps = 21/887 (2%) Strand=Plus/Plus Query 176373 CTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATAC 176432 || ||||| || |||| || |||||||| | | |||||| | || ||| | |||| Sbjct 15559641 CTGGTGTTCATCGTTGGTTTCTTGGGCAACACTATGGTGGTGGTGATCCTCACGAAATAC 15559700 Query 176433 ATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTA 176492 | || | | | || | || ||||| | ||||| ||| |||| || ||||||||||| Sbjct 15559701 AAGAGGCTTAGAATTATGACCAACATCTACCTGTTCAACCTGGCCATCTCTGACTTGCTC 15559760 Query 176493 TTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTATCATGATTGGACTTTT 176552 ||||| || ||| | || || ||||| |||||||| | | | || ||| ||| Sbjct 15559761 TTTCTCTTCACTCTTCCCTTCTGGATTCACTATATCAGGCGGAAA---GAGTGGGTGTTT 15559817 Query 176553 GGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTC 176612 | | | |||| || | ||| ||| ||| || | || ||||||| || || Sbjct 15559818 GACAACAGCATGTGCAAGTTCCTCTCGGGGTTGTATTCCCTGGGCTTGTACAGTGAGATC 15559877 Query 176613 TTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGC- 176671 |||| ||| |||||||| ||| | |||||||| || || | || |||| || ||| Sbjct 15559878 TTTTTCATAATCCTGCTGACAATGGACAGGTACCTGGCCATCGTGCATGCGGTGTTTGCC 15559937 Query 176672 -TTTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGG 176730 || ||| | | || || |||| ||| | | || |||| |||||| | | | Sbjct 15559938 CTTCGAGCTC--GCACGGTCACCTTTGGGGTCATCACAAGTGTCCTCACCTGGGTCTTCG 15559995 Query 176731 CAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCATGGACACCAAGATGACAATGGT-AGG 176789 ||||| | ||||||| |||||| |||| | | ||| | | || || Sbjct 15559996 CAGGGCTAGCAGCCCTCCCAGAATTTATCTTCCGAGAGTTCCATGGGGGGCCTGAAGAGT 15560055 Query 176790 GTTCAGTGTGATCCTTACTACCCAGAGATGTCTACAAATGTTTGGAGGCGCGCCCACGT- 176848 | || || ||| ||||| || | | | |||| || |||| Sbjct 15560056 CTACA-TGCAGCCCTGCATACCCCACGAACGAGGAAGAGGCCTGGAAGCATTTCCACACC 15560114 Query 176849 -TGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACT 176907 || ||| ||| ||| | | || || ||||||||||||| ||||| ||||||| | Sbjct 15560115 CTGAAAA--TGAATATCCTGGGACTTGTTCTGCCTCTGCTCATCATGGCCATCTGCTATT 15560172 Query 176908 ATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGC 176967 || ||| || | || ||| | ||| |||||| || |||| ||| || ||| ||| Sbjct 15560173 CTGGAATCATTAAAACGCTGCTCAGGTGCCCCAACAGAGCCAAGTGCAAAGCTATCCGGC 15560232 Query 176968 TCATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCC 177027 |||| ||| |||| ||| ||| || ||| |||| ||||||||||||||| | ||||| Sbjct 15560233 TCATTTTTCTCATAATGTTGGTCTTTTTCCTTTTCTGGACACCCTACAACCTAGTTCTGT 15560292 Query 177028 TACTGTCTACCTTTCACGCAAC--CCTTCTTAACCTGCAG-TGTGCATTGAGCAGTAACT 177084 | || ||| ||||||| ||| |||||| ||| |||| | | ||| || Sbjct 15560293 TTCTTTCTGCCTTTCA---AACTGTCTTCTTGGAGAACAGCTGTGAGTGCAACAGAAAGC 15560349 Query 177085 TGGACATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAG 177144 ||||| |||| || | | ||| | | || |||| ||||| || ||||||| Sbjct 15560350 TGGACCTGGCCAGGCAGGTGACAGAGGTGATCACCCACACCCACTGCTGTGTCAACCCTA 15560409 Query 177145 TGATCTACGCGTTCGTGGGGGAGAAGTT-TAGAAGACACCTGTACCACTTCTTCCACACC 177203 | ||||| || ||||| |||||||| || ||||| ||||| | ||||| ||||| | Sbjct 15560410 TCATCTATGCCTTCGTAGGGGAGAAATTCCAGAAG-TACCTGCATCACTTTTTCCATAGG 15560468 Query 177204 TACGTGGCCATCTACCTCTGCAAGTACATCCCCTTCCTGTCTGGTGA 177250 | || | ||||||||| |||| |||||||| ||||| || |||| Sbjct 15560469 CATGTAGGCATCTACCTGAGCAAATACATCCCATTCCTTCCTAGTGA 15560515 Score = 120 bits (132), Expect = 4e-22 Identities = 554/869 (64%), Gaps = 29/869 (3%) Strand=Plus/Minus Query 176346 GCTCAGGTGGTACCCGCCCTGTA-TCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATAT 176404 || ||| || | ||| || | || ||| || || ||| || |||| || |||||||| | Sbjct 15532346 GCCCAGCTGCTGCCCCCCTTATACTCT-CTGGTATTTGTCATTGGCCTGGTGGGCAATGT 15532288 Query 176405 CTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACT 176464 | | ||||| | | ||| | || | || | | | | | | || | ||| | || Sbjct 15532287 CCTGGTGGTCTTGGTCCTCACACAGTATAAGAGGCTACAGAGCATGACCAGCATCTACCT 15532228 Query 176465 GTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTA 176524 || |||||||| || |||||| |||| || || || || ||||| || ||||| |||| Sbjct 15532227 CTTCAACTTGGCCATTTCTGACCTGCTCTTCCTCTTCACATTGCCCTTCTGGATTGACTA 15532168 Query 176525 TATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGT 176584 | | || | |||| ||| |||||| | | || ||||||| || ||| || | Sbjct 15532167 CA---GGCTGAAGGATGACTGGGTTTTTGGCAATGCCATGTGTAAGCTCCTCTCTGGGCT 15532111 Query 176585 GTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTA 176644 | |||||| |||||||| ||||||| | |||||||||||| || | |||||||| Sbjct 15532110 CTATTACATAGGCTTGTACAGCGAGGTCTTCTTCATCATCCTGCTGACCCTTGACAGGTA 15532051 Query 176645 TCTAGCTGTTGTCTATGCTGTAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGCATAGT 176704 | || | ||| | ||||| || || || | || || |||| |||||| | Sbjct 15532050 CTTGGCCATCGTCCACGCTGTGTTCGCCCTGCGGGCCCGGACGGTCACCTTTGGCATCCT 15531991 Query 176705 TACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCA 176764 ||| | | |||||| ||||| ||| ||| |||| | || | |||| Sbjct 15531990 CACCAGCCTCATCACCTGGGGCCTGGCCATCTTGGCTTCCATCCCGGGTTTGTACTTT-- 15531933 Query 176765 TGGACACCAAGATGACAATGGTAG-----GGTTCA---GTGTGATCCTTACTACCC---A 176813 ||||| | || || || | ||| ||| || | ||| ||| Sbjct 15531932 -----TCCAAG-TCCCAGCGGGAGTTCACGCATCACACCTGTAGTCTTCACTTCCCTCAT 15531879 Query 176814 GAGATGTCTACAAATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTATGTTAAGTCTC 176873 |||| ||| ||||| ||||| | ||| | || ||| || | | || Sbjct 15531878 GAGA-ATCTGAAAATG--TGGAGACAGTTCCAGGCCCTGAAACTGAACCTGCTGGGGCTG 15531822 Query 176874 ATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTAT-CAGAAGACTGTTGAG 176932 || |||||||||| | |||| || |||||| | || || ||| | ||| | | Sbjct 15531821 GTTCTGCCTCTGCTGGTCATGGTCGTATGCTACACGGGCATCATACAG-ATCCTGCTCAA 15531763 Query 176933 GCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTA 176992 || |||| |||||||| || ||| || |||| ||||||||||||||| | || Sbjct 15531762 ACGACCCAATGAGAAGAAGACCAGGGCTGTCCGGCTAATCTTTGTCATCATGCTCATCTT 15531703 Query 176993 TTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCT 177052 ||| | |||||||| |||||||| | | | | ||||| | || || | ||||| Sbjct 15531702 CTTTCTCTTTTGGACCCCCTACAATCTGACTGTGTTTGTGTCTGCTTTCCAAGACACCCT 15531643 Query 177053 TCTTAACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAAC 177112 | | || | ||||| ||||| | ||||||||||| | | ||| | Sbjct 15531642 GTTCACCCGTCCGTGTGAGCAGAGCAAACAACTGGACATGGCTACCCAAGTGACAGAGGT 15531583 Query 177113 AGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTT 177172 | ||||| || ||||| ||| ||||||| || ||||| | || ||||| |||| ||| Sbjct 15531582 GATCGCCTATACCCACTGCTGCGTCAACCCTGTCATCTATGTCTTTGTGGGCGAGAGGTT 15531523 Query 177173 TAGAAGACACCTGTACCACTTCTTCCACA 177201 | | ||||| ||| ||||||||| Sbjct 15531522 CCGGAAGTACCTGCGCCAGCTCTTCCACA 15531494 Score = 120 bits (132), Expect = 4e-22 Identities = 554/869 (64%), Gaps = 29/869 (3%) Strand=Plus/Minus Query 9460 GCTCAGGTGGTACCCGCCCTGTA-TCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATAT 9518 || ||| || | ||| || | || ||| || || ||| || |||| || |||||||| | Sbjct 15532346 GCCCAGCTGCTGCCCCCCTTATACTCT-CTGGTATTTGTCATTGGCCTGGTGGGCAATGT 15532288 Query 9519 CTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACT 9578 | | ||||| | | ||| | || | || | | | | | | || | ||| | || Sbjct 15532287 CCTGGTGGTCTTGGTCCTCACACAGTATAAGAGGCTACAGAGCATGACCAGCATCTACCT 15532228 Query 9579 GTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTA 9638 || |||||||| || |||||| |||| || || || || ||||| || ||||| |||| Sbjct 15532227 CTTCAACTTGGCCATTTCTGACCTGCTCTTCCTCTTCACATTGCCCTTCTGGATTGACTA 15532168 Query 9639 TATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGT 9698 | | || | |||| ||| |||||| | | || ||||||| || ||| || | Sbjct 15532167 CA---GGCTGAAGGATGACTGGGTTTTTGGCAATGCCATGTGTAAGCTCCTCTCTGGGCT 15532111 Query 9699 GTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTA 9758 | |||||| |||||||| ||||||| | |||||||||||| || | |||||||| Sbjct 15532110 CTATTACATAGGCTTGTACAGCGAGGTCTTCTTCATCATCCTGCTGACCCTTGACAGGTA 15532051 Query 9759 TCTAGCTGTTGTCTATGCTGTAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGCATAGT 9818 | || | ||| | ||||| || || || | || || |||| |||||| | Sbjct 15532050 CTTGGCCATCGTCCACGCTGTGTTCGCCCTGCGGGCCCGGACGGTCACCTTTGGCATCCT 15531991 Query 9819 TACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCA 9878 ||| | | |||||| ||||| ||| ||| |||| | || | |||| Sbjct 15531990 CACCAGCCTCATCACCTGGGGCCTGGCCATCTTGGCTTCCATCCCGGGTTTGTACTTT-- 15531933 Query 9879 TGGACACCAAGATGACAATGGTAG-----GGTTCA---GTGTGATCCTTACTACCC---A 9927 ||||| | || || || | ||| ||| || | ||| ||| Sbjct 15531932 -----TCCAAG-TCCCAGCGGGAGTTCACGCATCACACCTGTAGTCTTCACTTCCCTCAT 15531879 Query 9928 GAGATGTCTACAAATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTATGTTAAGTCTC 9987 |||| ||| ||||| ||||| | ||| | || ||| || | | || Sbjct 15531878 GAGA-ATCTGAAAATG--TGGAGACAGTTCCAGGCCCTGAAACTGAACCTGCTGGGGCTG 15531822 Query 9988 ATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTAT-CAGAAGACTGTTGAG 10046 || |||||||||| | |||| || |||||| | || || ||| | ||| | | Sbjct 15531821 GTTCTGCCTCTGCTGGTCATGGTCGTATGCTACACGGGCATCATACAG-ATCCTGCTCAA 15531763 Query 10047 GCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTA 10106 || |||| |||||||| || ||| || |||| ||||||||||||||| | || Sbjct 15531762 ACGACCCAATGAGAAGAAGACCAGGGCTGTCCGGCTAATCTTTGTCATCATGCTCATCTT 15531703 Query 10107 TTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCT 10166 ||| | |||||||| |||||||| | | | | ||||| | || || | ||||| Sbjct 15531702 CTTTCTCTTTTGGACCCCCTACAATCTGACTGTGTTTGTGTCTGCTTTCCAAGACACCCT 15531643 Query 10167 TCTTAACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAAC 10226 | | || | ||||| ||||| | ||||||||||| | | ||| | Sbjct 15531642 GTTCACCCGTCCGTGTGAGCAGAGCAAACAACTGGACATGGCTACCCAAGTGACAGAGGT 15531583 Query 10227 AGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTT 10286 | ||||| || ||||| ||| ||||||| || ||||| | || ||||| |||| ||| Sbjct 15531582 GATCGCCTATACCCACTGCTGCGTCAACCCTGTCATCTATGTCTTTGTGGGCGAGAGGTT 15531523 Query 10287 TAGAAGACACCTGTACCACTTCTTCCACA 10315 | | ||||| ||| ||||||||| Sbjct 15531522 CCGGAAGTACCTGCGCCAGCTCTTCCACA 15531494 >seq6 Length=51880498 Score = 159 bits (176), Expect = 4e-34 Identities = 132/161 (82%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 || || |||| || || | ||||||||| ||||||| ||||||||| |||||||||||| Sbjct 43802740 AGTCCAGTGACATGCGCAATCATGTAGGTGAGCAGGGCGTAGCTGGCAATGTTGAAGGGC 43802681 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || ||||| |||||||| ||||| | |||||||| ||||||||| ||||| ||| | | Sbjct 43802680 ACGCCCAGGCCCATGTCTCCCGACCTCTGGTACAACTGGCAGGACAGCTCGCCGTTCACT 43802621 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 |||||||||||||| || ||||| || ||||||||||| Sbjct 43802620 ACGTAGAACTGGCAGAGAGCATGGCATGGGGGCAGGGCCAT 43802580 >seq4 Length=59374630 Score = 136 bits (150), Expect = 5e-27 Identities = 120/149 (81%), Gaps = 3/149 (2%) Strand=Plus/Minus Query 138090 CAGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATCCTTTTCCTG 138149 |||||||| | ||| || || ||||||||||| || |||||||| | ||||| Sbjct 41623071 CAGCCTCAGTCGGAGAGTCTTCAGCTTTTCCCCGAGCGAGTTCACGTGCTCCTTGAT--- 41623015 Query 138150 GTCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAACTGGATCATCTC 138209 ||| | || || ||||| ||||||||||||||||||| ||| ||||||||||||||||| Sbjct 41623014 GTCTGGGCCATGATTCTCCGCCTGGGGCATCACCTCCTTCAGATAAAACTGGATCATCTC 41622955 Query 138210 AGACAGGGCCTGGCAGCCCAGGTAACCCT 138238 |||| ||| ||||| ||||||||||||| Sbjct 41622954 TGACAAGGCTTGGCATCCCAGGTAACCCT 41622926 Score = 118 bits (130), Expect = 1e-21 Identities = 82/93 (88%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 137924 AGTTTTTCATCTTTGTGGTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACTCGC 137983 || |||||||| | ||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct 41625155 AGCTTTTCATCCTCGTGGTCATGTAGGTTTCTATGTAGTTGATGAAGATGTCAAACTCGC 41625096 Query 137984 TCATGGCCTTGTAGACCCCTTTTTCCTGGAGCT 138016 ||||||| ||||| || ||||| || ||||||| Sbjct 41625095 TCATGGCTTTGTACACACCTTTCTCTTGGAGCT 41625063 Score = 86.0 bits (94), Expect = 7e-12 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 138015 CTTGCTGAAGGCGCTCTTCACCTGCTCCACGGCCTTGCTCTTATTCTCGCAGGGCAGGAA 138074 ||| ||||||||||||||||||||||||||||||| |||||| || || ||||| ||||| Sbjct 41624073 CTTACTGAAGGCGCTCTTCACCTGCTCCACGGCCTGGCTCTTGTTTTCACAGGGGAGGAA 41624014 Query 138075 TC 138076 || Sbjct 41624013 TC 41624012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589999935120840