Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ochotona_20princeps_20[refseq_20GCF_5F000292845.1_202012-08-27] 10,421 sequences; 2,229,840,584 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq42 181 1e-40 seq49 145 8e-30 seq76 138 1e-27 seq14 131 2e-25 seq40 129 6e-25 seq6 129 6e-25 seq24 116 4e-21 seq17 109 6e-19 seq30 105 7e-18 seq26 100 3e-16 seq7 95.1 1e-14 seq3 91.5 2e-13 seq1 91.5 2e-13 seq78 87.8 2e-12 seq65 87.8 2e-12 seq58 87.8 2e-12 seq144 86.0 6e-12 seq89 86.0 6e-12 >seq42 Length=18384968 Score = 181 bits (200), Expect = 1e-40 Identities = 179/229 (78%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || |||||||| || || |||||||| ||||||||| |||| || || ||| | Sbjct 13799899 ATGCAGATCTTCGTAAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGCCCAGC 13799958 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | ||||| ||||| || || | ||||| |||||||||||| ||||||| Sbjct 13799959 GACACCATCGAAAACG-TCAAGACCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCA 13800017 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| || |||| |||||||| || | ||||| || ||||||||| Sbjct 13800018 GCAGCGTCTCATCTTTGCCAGCAAGCAGCTGGAGGATGGTCGCACTCTGTCCGACTACAA 13800077 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||| ||| |||||||||| || ||| | ||| || |||| ||| Sbjct 13800078 CATCCAGAAAGAGTCCACGCTGCACCTGGTGCTCCGCCTGCGGGGTGGC 13800126 >seq49 Length=14824766 Score = 145 bits (160), Expect = 8e-30 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| ||||||||| | || || ||| ||| | Sbjct 11086096 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAACCCAGC 11086155 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | ||| |||||| || || | || ||||| |||||||| | |||||| Sbjct 11086156 GACACCATCGAAAATGTCAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCCGACCAG 11086215 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| || ||||| |||||||| |||| |||||||| ||||||||| Sbjct 11086216 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGACGGACGCACCCTGTCTGACTACAAC 11086275 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| |||| ||||| Sbjct 11086276 ATCCAGAAGGAGTCCACCCTGCA 11086298 >seq76 Length=7797616 Score = 138 bits (152), Expect = 1e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || || || ||||| ||||||||| | || || || ||| Sbjct 4981037 AATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 4980978 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||||| | | | | |||||| || || | || || || |||||||| | ||||| Sbjct 4980977 CGACACCATCGAGAATGTCAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCCGACCA 4980918 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || ||||| |||||||| |||| |||||||| |||||||| Sbjct 4980917 GCAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGACGGCCGCACCCTGTCTGACTACAA 4980858 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||||| |||| ||||| || || |||| Sbjct 4980857 CATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCG 4980822 >seq14 Length=40210847 Score = 131 bits (144), Expect = 2e-25 Identities = 98/115 (85%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||||||||||| ||||||||||| || ||||| || |||||||| | |||| ||| Sbjct 6353509 GAGCCGCTGCTGCGGGAGAACCCCCGGCGCTTCGTCATCTTCCCCATCGAGTACCACGAC 6353568 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGG 116690 || |||| |||||||| |||||||||||||| |||||||| | ||||||||||| Sbjct 6353569 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCCTTCTGGACGGCCGAGGAGGTGG 6353623 Score = 95.1 bits (104), Expect = 1e-14 Identities = 92/116 (79%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 116685 AGGTGGACCTGTCCAAGGACA-CGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCAT 116743 ||||||| |||||||||||| ||| |||||||| | |||| ||| | ||||| | Sbjct 6353718 AGGTGGATTTGTCCAAGGACATTCAGC-ACTGGGAGGCCCTGAAGGACGAGGAGCGGTAC 6353776 Query 116744 TTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAA 116799 |||||| |||||| |||| || |||||||||||||||||||| || ||||| || Sbjct 6353777 TTCATCTCGCACGTCTTGGCTTTCTTCGCCGCCAGCGACGGCATAGTAAACGAAAA 6353832 Score = 89.7 bits (98), Expect = 5e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 117044 GTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGG 117103 || |||||||| || || || ||| | ||||| || ||| ||||| |||| || ||| Sbjct 6356484 GTAGCCTTCGCTGCGGTGGAAGGCATTTTCTTCTCCGGCTCCTTCGCGTCCATCTTCTGG 6356543 Query 117104 CTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGAC 117163 |||||||| || ||||| ||||| || || |||||| ||| || ||||| |||||| Sbjct 6356544 CTCAAGAAGCGAGGCCTGATGCCTGGGCTCACTTTCTCCAATGAACTCATTAGCAGGGAT 6356603 Query 117164 GAGG 117167 |||| Sbjct 6356604 GAGG 6356607 >seq40 Length=19049039 Score = 129 bits (142), Expect = 6e-25 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 || || || || || || ||||| ||||||||| | || ||||| ||| ||||| | | Sbjct 15841128 TTTGTCAAGACCCTAACCGGCAAGACCATCACCCTGGAGGTCGAGCCCAGCGACACCATC 15841187 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | |||||| || || | || || || |||||||| | |||||||| | || Sbjct 15841188 GAGAATGTCAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCCGACCAGCAGAGGCTG 15841247 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| || ||||| |||||||| ||| | |||||||| |||||||||||||||||| Sbjct 15841248 ATCTTTGCAGGCAAGCAGCTGGAAGACAACCGCACCCTGTCTGACTACAACATCCAGAAG 15841307 Query 40879 GAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||| |||| ||||| || || | || | ||||| ||| Sbjct 15841308 GAGTCCACCCTGCACCTGGTCCTCCGTCTTAGGGGTGGC 15841346 >seq6 Length=51880498 Score = 129 bits (142), Expect = 6e-25 Identities = 168/231 (73%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || || || ||||| ||||||||| | || || ||| || Sbjct 47505057 AAGATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAACCC 47505116 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | ||||| | | | | |||||| || || | | || || |||||||| | ||| Sbjct 47505117 AGCGACACCATCGAGAATGTCAAGGCCAAGATCCAGGT-AAGGAAGGCATCCCTCCTGAC 47505175 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| | || |||| || ||||| |||||||| || | |||||||| |||||| Sbjct 47505176 CAGCAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTAC 47505235 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||||| |||| ||||| || || | || | ||||| ||| Sbjct 47505236 AACATCCAGAAGGAGTCCACCCTGCACCTGGTCCTCCGTCTTAGGGGTGGC 47505286 Score = 100 bits (110), Expect = 3e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || |||||||| || || |||||||| ||||||||| | || | || || | Sbjct 32416181 ATGCAGATCTTCGTAAAGACCCTTACGGGCAAGACCATCACCCTAGAGGAAGAGCCCTCG 32416240 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | ||| | || | |||| | || || || || || || |||| ||| Sbjct 32416241 GATACGATAGAAAATGTAAAAGCCAAAACCCAGGATAAGGAAGGAATTCCTCCGGATCAG 32416300 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAAC-GACTACAA 40868 ||| || | |||| || ||||| |||||||| || | || | | ||| | |||||||| Sbjct 32416301 CAAAGATTGATCTTTGCTGGCAAGCAGCTGGAAGATG-GCCAAACTTCATCTGACTACAA 32416359 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 ||| ||||||||| |||| ||||| || ||| || Sbjct 32416360 CATTCAGAAGGAGTCCACTCTGCACCTGGTGCTG 32416393 >seq24 Length=26830293 Score = 116 bits (128), Expect = 4e-21 Identities = 162/224 (72%), Gaps = 5/224 (2%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| ||||||||| | || || || ||| Sbjct 11934144 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAAT 11934203 Query 40750 GA--CAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 || || || | || | |||||| || || | || || || |||||||| | || | Sbjct 11934204 GAAACATCGAG--AATG-TCAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCCGAAC 11934260 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| | || |||| || ||||| |||||||| || | | |||||| ||||||| Sbjct 11934261 AGCAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCACACCCTGTCTGACTACA 11934320 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGG 40911 |||||||||||||| |||| ||||| || || ||||| ||||| Sbjct 11934321 ACATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCGCCTGAGG 11934364 Score = 98.7 bits (108), Expect = 1e-15 Identities = 90/114 (79%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 40804 GACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 40863 |||||||| | || |||| || ||||| |||||||| || | |||||||| ||| Sbjct 11934030 GACCAGCAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGAC 11934089 Query 40864 TACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||||||||| |||| ||||| || || ||||| ||||||| ||| Sbjct 11934090 TACAACATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCGCCTGAGGGGTGGC 11934143 >seq17 Length=35549867 Score = 109 bits (120), Expect = 6e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || |||| ||||||||| | || || || || | Sbjct 30592892 ATGCAGATCTTTGTGAAGACCCTGACCAGCAAGACCATCACCCTGGAGGTTGAGCACAGC 30592951 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| || || | || || || |||||||| | |||||| Sbjct 30592952 GACACCATCGAGAATGTCAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCCGACCAG 30593011 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 | | || |||| || ||||| |||||||| || | |||||||| ||||||||| Sbjct 30593012 AAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 30593071 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||| |||||| |||| ||||| || || | || | ||||| ||| Sbjct 30593072 ATCCAAAAGGAGTCCACCCTGCACCTGGTCCTCCGTCTTAGGGGTGGC 30593119 >seq30 Length=25365230 Score = 105 bits (116), Expect = 7e-18 Identities = 163/233 (70%), Gaps = 15/233 (6%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||| | || || || || ||||| ||||| || | || || || ||| Sbjct 16538574 AATGCAGATCTTCATGAAGACCCTGACAGGCAACACCATTACGCTTGAGGTGGAGCCCAG 16538515 Query 40749 CGACAGCGTGCAAA-CGCT---CAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 ||||| | | ||| || | ||||| || || | ||| |||||||||||||| ||| Sbjct 16538514 CGACACCTTCAAAAACGTTTTTCAAGGCGAAGATCCAGGACGAAGAGGGCATCCCCCCGG 16538455 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864 ||||||| || || |||| || | ||| ||| |||| || || ||||| Sbjct 16538454 ACCAGCAGCGTCTGATCTTTGCCGACAAGCAGTTGGAGGATGACCGCAC----------- 16538406 Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||| ||| |||||||||| || ||| | ||| || |||| ||| Sbjct 16538405 TTAACATCCAGAGAGAGTCCACGCTGCACCTGGTGCTCCGCCTGCGGGGTGGC 16538353 >seq26 Length=25362064 Score = 100 bits (110), Expect = 3e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 40724 CCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCG 40783 |||| ||| | || || ||| ||| ||||| | | | | |||||| | || | | Sbjct 23897846 CCATAACCCTGGAGGTGGAACCCAGCGACACCATCGAGAATGTCAAGGCCATGATCCAAG 23897905 Query 40784 ACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACG 40843 | || || |||| ||| | |||||||| | || |||| || ||||| |||||||| | Sbjct 23897906 ATAAGGAAGGCAGCCCTCCTGACCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAG 23897965 Query 40844 ACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGC 40903 | | | |||| | |||||||||||||||||| || |||| ||||| || || ||| Sbjct 23897966 ATGGCCACACCTTGTCTGACTACAACATCCAGAAGAAGTCCACCCTGCACCTGGTCCTGC 23898025 Query 40904 GCTTGAGGGGCGG 40916 |||||||||| || Sbjct 23898026 GCTTGAGGGGAGG 23898038 >seq7 Length=48563517 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/218 (71%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||| | || || || || || || | |||| | ||||||||| |||| || || | Sbjct 22655023 AAAATGTAGATCTTTGTGAAGACTCTGATGGGCTAGACCATCACC-TCGAGGTGGAGTCT 22654965 Query 40747 ACCGACAGCG-TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | | || | || ||| | |||||| || | | |||||||||||||||| | | | Sbjct 22654964 AGTGCCACCACTGAAAATG-TCAAGGCGAAGACCCAGGACAAAGAGGGCATCCTCCCAGT 22654906 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| | || |||| || ||||| | ||||| || | |||| || ||||| Sbjct 22654905 CCAGCAGCATCTTATCTTTGCCGGCAAGCCTCTGGAGGATGGTGGCACTCTGTGGGACTA 22654846 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGC 40903 |||||||||| | ||| |||| ||||| || ||| ||| Sbjct 22654845 CAACATCCAGGAAGAGTCCACACTGCACCTGGTGCTGC 22654808 >seq3 Length=63406555 Score = 91.5 bits (100), Expect = 2e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || ||||| |||| |||| || ||| | ||| | Sbjct 63015809 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCACCACCCCGGAGGTCAAGCCCAGC 63015750 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| || || | || || || |||||||| | |||||| Sbjct 63015749 GACACCATAGAGAATGTCAAGGCGAAGATCCAGGATAAGGAAGGCATCCCTCCTGACCAG 63015690 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | |||| || |||| ||||||| ||| | || ||||| | ||||||| Sbjct 63015689 CAGAGGTTGATCTTTGCAGGCAGGCAGCTGGGAGACAACCGTACCCTGTCTGTCTACAAC 63015630 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||| ||| |||| ||||| Sbjct 63015629 ATCCAGAAAGAGTCCACCCTGCA 63015607 >seq1 Length=83735184 Score = 91.5 bits (100), Expect = 2e-13 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 40817 TCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGA 40876 |||| | || ||||| |||||| | |||| |||||||| | |||||||||||||||| Sbjct 78976169 TCATATTTGCAGGCAAGCAGCTGAAAGACGGCCGCACCCTGACTGACTACAACATCCAGA 78976110 Query 40877 AGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||| |||| ||||| || || ||||| ||||||| || Sbjct 78976109 AGGAGTCCACCCTGCACCTGGTCCTGCGCCTGAGGGGTGG 78976070 >seq78 Length=8204013 Score = 87.8 bits (96), Expect = 2e-12 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 40792 GGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGC 40851 ||||||||| |||||||||| || ||||||| || ||||| |||||||| || | ||| Sbjct 1576177 GGCATCCCCCCGGACCAGCAGCGTCTCATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGC 1576118 Query 40852 ACCCTCAACGACTACAACATCCAGAA 40877 || || |||||||||||||||||| Sbjct 1576117 ACTCTGTCCGACTACAACATCCAGAA 1576092 >seq65 Length=10584338 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| | || || || || || || ||||| ||||||||| |||| || || || Sbjct 10480777 AAGATGCAGGTCTTTGTCAAGACCCTTACAGGCAAGACCATCACCCTCGAGGTTGAGCCC 10480836 Query 40747 ACCGACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | || | | | ||||| | || | ||| | | || || || || || || ||| Sbjct 10480837 TCGGATACGATAGAAAACG-TAAAAGCCAAAGTCCAGGATAAGGAAGGAATTCCTCTGGA 10480895 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| |||| |||| || ||||| |||||||| | | || || | ||||| Sbjct 10480896 TCAGCAAAGACTGATCTTTGCTGGCAAGCAGCTGGAATATGGCCGAACTTTATCGGACTA 10480955 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||||| ||||||||| | || |||||||| ||| || Sbjct 10480956 CAACATTCAGAAGGAGTCTACTCTGCATCTGGTGCTG 10480992 >seq58 Length=12492363 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 40766 TCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACG 40825 |||||| || || | || || || |||||||| | |||||||| | || |||| | Sbjct 9398178 TCAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCCGACCAGCAGAGGCTGATCTTTG 9398119 Query 40826 CGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCA 40885 | ||||| | ||||| || | |||||||| ||||||||||||||||||||| ||| Sbjct 9398118 CAGGCAAGGAACTGGAAGATGGCCGCACCCTGTCTGACTACAACATCCAGAAGGAGTCCA 9398059 Query 40886 CGCTGCATCTAGTGTTGCGCTTG 40908 | |||| || || ||||| || Sbjct 9398058 CCTTGCACCTGGTCCTGCGCCTG 9398036 >seq144 Length=1538201 Score = 86.0 bits (94), Expect = 6e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 || || || |||||||| | |||||| | |||| || | | ||| | |||||||| Sbjct 1533808 GATAAGGAAGGCATCCCTGTTGACCAGTAGAGACTGATGTTTGTAGGCTAGCAGCTGGAA 1533749 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 || | |||||||| ||||||||||||||||||||| |||| ||||| || ||| || Sbjct 1533748 GATGGCCGCACCCTGTCTGACTACAACATCCAGAAGGAGTCCACCCTGCACCTGGTGCTG 1533689 Query 40903 CGCTTGAGGGGCGGCGG 40919 | | | ||| | || || Sbjct 1533688 CACCTAAGGAGGGGAGG 1533672 >seq89 Length=4604762 Score = 86.0 bits (94), Expect = 6e-12 Identities = 162/235 (69%), Gaps = 19/235 (8%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || || | | || || ||||||| |||||||| | | || || || Sbjct 833856 AAAATGCAGATGTTTGCGGAGACCCTT-CGGGCAAGACCATCACTG---AGGTGGAGCCC 833801 Query 40747 ACCGACAGCGTGC--AAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 | || || | | |||| ||||| || || | |||||||| ||| | ||| || Sbjct 833800 AACGGCACCACCCGAAAACCTTCAAGATGAAGATCCAGGACAAAGACGGCGTTCCCCTGG 833741 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCA--CCCTCAACGA 40862 ||||||| | || ||||| || ||||| |||| |||| || || || Sbjct 833740 ACCAGCAGCTG---------GCCGGCAAGCATCTGGAGGACGGCCGCAGTCCGTCG--GA 833692 Query 40863 CTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||||| ||| |||||||||| || ||| | ||| || |||||||| Sbjct 833691 CTACAACATCCAGAAAGAGTCCACGCTGCACCTGGTGCTCCGCCTGCGGGGCGGC 833637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515152086258960