Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ochotona_20princeps_20[refseq_20GCF_5F000292845.1_202012-08-27] 10,421 sequences; 2,229,840,584 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq9 86.0 7e-12 >seq9 Length=49469770 Score = 86.0 bits (94), Expect = 7e-12 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 126079 GATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCTTCAACCAGAAAAT 126138 |||||||||||| || || ||||| ||||| ||||| | |||||||| |||||| || Sbjct 15785001 GATGAGTTCATTGGAAAAAGTGAGTCCAGGCATCAGACCTCTCTTCTTCAGCCAGAATAT 15785060 Query 126139 CGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACA 126175 ||| ||| || ||||||||||| ||||| || ||| Sbjct 15785061 AGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACA 15785097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597275787226680