Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ochotona_20princeps_20[refseq_20GCF_5F000292845.1_202012-08-27] 10,421 sequences; 2,229,840,584 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq19 304 2e-77 seq129 302 6e-77 seq1486 297 2e-75 seq3 210 3e-49 seq21 174 2e-38 seq1 134 2e-26 >seq19 Length=29527457 Score = 304 bits (336), Expect = 2e-77 Identities = 841/1272 (66%), Gaps = 38/1272 (3%) Strand=Plus/Plus Query 6896 GGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCA 6955 || ||||| || || ||| || | |||||||| | ||||| || |||| || Sbjct 27374379 GGGATCGTGGTGTTCCTCTTGATGAGTGGGGTCATGACCCCACCTGCCGTCTCGATGCCC 27374438 Query 6956 AGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCC--CTTCAC 7013 || ||||| || |||||||||| || | |||||| || || ||| ||| ||| | Sbjct 27374439 AGCGACAGCGGAGTCACGTCCAGCAGCAGCAGGTCCTGCACG--TTC--TCCGACTTGTC 27374494 Query 7014 CCG--TTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAAT 7071 || | | |||||| || || || | || ||||| || |||||||| |||||||| || Sbjct 27374495 CCCGATGAGGATGGCCGCCTGCACGGCGGCGCCGTAGGCCACCGCCTCGTCGGGGTTGAT 27374554 Query 7072 CGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGAT 7131 | || || || || || ||||| || | ||| | || | || || || ||||| Sbjct 27374555 GCTCTTGTTGAGCTCCTTGCCGTTGAAGAAGTCCTGCAGCAGCTTCTGGATCTTGGGGAT 27374614 Query 7132 TCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTC 7191 || || || || || |||| || || || | | | || || | ||| | ||| Sbjct 27374615 GCGCGTGGAGCCGCCCACCAGCACAATCTCCTGAATCTGGCCCTTGTCCAGCTTGGCGTC 27374674 Query 7192 TCGAAGTGTTTTTTCGACAGGTTCCA---TACATTTACGGAACAAGTCCATACACAGTTC 7248 || || | || || || || |||| | | | ||||||| ||| || || Sbjct 27374675 GCGCAGCGCCTTCTCCACGGGCTCCAGCGTCCCT---CGGAACAGGTCGGCGTTGAGCTC 27374731 Query 7249 CTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAAT 7308 ||| || || || ||||| ||||| || ||||| || || || ||||| | ||| || || Sbjct 27374732 CTCGAAGCGGGCGCGGGTGATGGACGTGTAGAAGTCCACCCCCTCGTAGAGCGAGTCGAT 27374791 Query 7309 TTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCG 7368 || ||| | | || | | ||| | || ||||| |||||||| || ||||| || Sbjct 27374792 CTCGATGCTGGCCTGCGTGGACGAGCTCAGGGTGCGCTTGGCGCGCTCGCAGGCCGTGCG 27374851 Query 7369 TAAACGACGAAGGGCACGCGGGTTA---CCGGAAATATCTTTCTTATGTTTACGTTTAAA 7425 | || || | ||| ||| ||| ||| || || ||||| || || || || || Sbjct 27374852 CAGCCGCCGCACGGCGCGCTTGTTGGGTCCG---ATGTCCTTCTTGTGCTTGCGCTTGAA 27374908 Query 7426 CTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATC 7485 ||| || | | ||| | | | | ||||| || || || |||| ||| || || Sbjct 27374909 CTCCTCTGCCAGGTGGCTCACCATGCGGTTGTCGAAGTCCTCGCCGCCCAGGTGGGTGTC 27374968 Query 7486 CCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAA 7545 || || || | || || || ||||| || | || ||| | | | || || || || Sbjct 27374969 TCCGGCCGTGGACTTCACCTCGAAGATGCCGTCCTCGATGGTCAGGATGGACACGTCGAA 27375028 Query 7546 CGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG------TTCTT 7599 || || || |||||||| || ||||| |||||| | ||| || | | ||||| Sbjct 27375029 GGTGCCGCCGCCCAGGTCGAAGATGAGCACGTTCTTCTCGCCGCCCGCGCAGCCCTTCTT 27375088 Query 7600 ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAG 7659 || || ||||| ||||| ||||||||||| || || || || || || || ||| || Sbjct 27375089 GTCCAGGCCGTAGGCGATGGCCGCCGCCGTGGGCTCGTTGATGATGCGGAGCACGTTGAG 27375148 Query 7660 GCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGG 7719 ||| | || || |||| || || || || || || ||||| ||||| || |||||||| Sbjct 27375149 GCCCGTGATGGTGCCCGCGTCCTTGGTGGCCTGGCGCTGCGAGTCGTTGAAATAGGCCGG 27375208 Query 7720 GACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779 |||||| | ||| ||| | || || || || || | ||| ||||| || ||||| Sbjct 27375209 GACCGTGATGACGGCGCTCTGCACCTTGCCCCCCAGGTAGGCTTCAGCGATCTCCTTCAT 27375268 Query 7780 TTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGT-TTCGTTTCACCGTTAA 7838 ||||| || ||||| || || |||||||| | | | | || ||| | || || || Sbjct 27375269 CTTGGTGAGCACCATGGAGGAGATCTCTTCCG-GGAAGAAGGTCTTCATCTCGCCCTTGT 27375327 Query 7839 AATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTT 7898 | || || | | | |||| || || | | || | || ||| ||| | | Sbjct 27375328 ACTCCACCTGCACCTTGGGCTT-GCCTC--CCTCGCTCACCACGCGGAACGGCCAGTGCT 27375384 Query 7899 TCATATCGTCTTGGACCTGTTG-GTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCA 7957 |||| || || ||| || | |||| ||||| | |||||| || | ||| || || Sbjct 27375385 TCATGTCCGACTGCACC-GTGGCGTCCTCGAACTTGCGTCCGATCAGCCTCTTGGCGTCG 27375443 Query 7958 AAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGT 8017 || | ||||| ||||||||||||| ||||||||| |||||||| ||||| || || Sbjct 27375444 AAGATGGTGTTGGTGGGGTTCATGGCCACTTGGTTCTTGGCCGCGTCGCCGATGAGGCGC 27375503 Query 8018 TCATTATTTTCCGTAAACGCGACGTACGATGGG-GTCGTTCGATTCCCTTGGTCGTTCGC 8076 || | ||||| || || ||||| | |||| || || || || || |||||||| || Sbjct 27375504 TC---CGTGTCCGTGAAGGCCACGTA-GCTGGGCGTGGTGCGGTTGCCCTGGTCGTTGGC 27375559 Query 8077 AATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATC 8136 || || || || | | | ||| |||| || |||||||| || || || || | || Sbjct 27375560 GATGATCTCCACTTTGCCATGTTGGAAGACCCCCACGCACGAGTAGGTGGTGCCCAGGTC 27375619 Query 8137 AATACCGATTGC 8148 || ||||| || Sbjct 27375620 GATGCCGATGGC 27375631 >seq129 Length=2073869 Score = 302 bits (334), Expect = 6e-77 Identities = 819/1236 (66%), Gaps = 32/1236 (3%) Strand=Plus/Plus Query 6926 GTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAAC 6985 ||||| | || ||| || || || || || ||||| || | |||||||| || | | Sbjct 701377 GTCATCACGCCGCCCGCCGTCTCCAGCCCCAGCGACAGCGGCGCCACGTCCAGCAGCAGC 701436 Query 6986 AGGTCTTGAACAGATTCGTTCC--CTT--CACCCGTTAAGATGGCGGCTTGGACCGTCGC 7041 ||||| || || ||| ||| ||| | ||| | | |||||| || || || | ||| Sbjct 701437 AGGTCCTGCACG--TTC--TCCGACTTGTCGCCCATCAGGATGGCCGCCTGCACGGCCGC 701492 Query 7042 CCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATA 7101 ||||| || |||||||| || ||||| || | || || || || ||||| || | Sbjct 701493 GCCGTACGCCACCGCCTCGTCCGGGTTGATGCTCTTGTTGAGCTCGCGCCCGTTGAAGAA 701552 Query 7102 ATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTC 7161 ||| | || | || | || ||||| || || || || || |||| || | || Sbjct 701553 GTCCTGCAGCAGCTTCTGCACCTTGGGGATGCGCGTGGAGCCGCCCACCAGCACCAGGTC 701612 Query 7162 ATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACA 7221 | | | || || || | ||| | ||| || || | || || || || |||| Sbjct 701613 GTGGATCTGCGCCTTGTCCAGCTTGGCGTCGCGCAGCGCCTTCTCCACGGGCTCCAGCGT 701672 Query 7222 TTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAA 7281 ||||||| |||| ||||| ||||| || || || || || ||||| || ||||| Sbjct 701673 GCCGCGGAACAGGTCCGAGCACAGCTCCTCGAAGCGCGCCCGCGTGATGGACGTGTAGAA 701732 Query 7282 ATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTG---TTTGTGCCGTCGAAGATAA 7338 || | ||| || | | |||||| || || | ||||| | |||| | || || | Sbjct 701733 GTCGATGCCCTCAAAAAGCGAATCGATCTCCA-GGTTGGCCTGCGTGCTG--GACGACAG 701789 Query 7339 CGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGA 7398 ||| ||||| || ||||| |||||||| || | || || | ||| ||| ||| | Sbjct 701790 CGTGCGCTTGGCCCGCTCGCACGCCGTGCGCAGCCGCCGCACGGCGCGCTTGTTCTGGCT 701849 Query 7399 AATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATC 7458 || || ||||| || || | || ||||| || |||||| | | || | || Sbjct 701850 GATGTCCTTCTTGTGCTTCCTCTTGAACTCCTCCACGAAGTGGCTCACCAGCCGGTTGTC 701909 Query 7459 GAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCC 7518 ||| || || || |||| ||| || || ||||| || || || || || ||||| || | Sbjct 701910 GAAGTCCTCGCCGCCCAGGTGCGTGTCGCCCGCCGTGGCCTTCACCTCGAAGATGCCGTC 701969 Query 7519 TTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT 7578 || ||| | | | || || || ||||| || || |||||||| || ||||| ||||| Sbjct 701970 GTCGATGGTCAGGATGGACACGTCGAACGTGCCCCCGCCCAGGTCGAAGATGAGCACGTT 702029 Query 7579 CGTATCG-TCGTCTTTGTTCTTA---TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 || || | ||| ||| || || ||||| ||||| || |||||||| || | Sbjct 702030 G----CGCTCCCCCTTGCCCTTGCGGTCCAGCCCGTAGGCGATGGCGGCCGCCGTGGGCT 702085 Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 | || || || | || ||| ||||| || || |||| || |||||||| || | Sbjct 702086 CGTTGATGATCCTCAGCACGTTGAGGCCCGCGATCACGCCCGCGTCCTTCGTCGCCTGCC 702145 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754 | ||||| ||||| ||||| ||||| ||||| | ||||||| | || || || | Sbjct 702146 GCTGCGAGTCGTTGAAGTACGCCGGCACCGTGATCACCGCGTTGCTCACCGCCTGGCCCA 702205 Query 7755 GATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCG 7814 | |||| || ||||| || ||||| ||||| || |||||||| || ||||| || | Sbjct 702206 GGTACGCCTCGGCGATCTCCTTCATCTTGGTCAGCACCATCGACGAGATCTCCTCCGGGT 702265 Query 7815 CAAACTGTTTCGTTTCACCGTTAAAA-TCAACTTCAATCATGGGTTTATCCGCAGCACCG 7873 ||| || | || || || | ||| || || | |||| || || || | || Sbjct 702266 AGAACGCCTTGCTCTCCCCCTTGTAGCTCACCTGCAC-CTTGGGCTTGTC-GC--CCTCG 702321 Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTT 7933 | |||| ||| ||| | ||||| || || ||| |||| ||||| Sbjct 702322 CTCACCACCTGGAACGGCCAGTGCTTCATGTCCGACTGCACCACCGGGTCGCCGAACTTG 702381 Query 7934 CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTC 7993 | ||||| || ||||| || || || || ||||| | ||||||||||| |||||| Sbjct 702382 CGCCCGATCAGCCGCTTCGCGTCGAACACCGTGTTCTGCGGGTTCATGGCCACCTGGTTC 702441 Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG-GT 8052 || |||||||| ||||| ||||| || | ||||| || || ||||| | |||| || Sbjct 702442 TTGGCCGCGTCGCCGATCAGACGCTC---CGTGTCCGTGAAGGCCACGTA-GCTGGGCGT 702497 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112 || || || || |||||||| || || || || || | ||| || | ||||| || Sbjct 702498 GGTGCGGTTGCCCTGGTCGTTGGCGATGATCTCCACCTTGCCGTGCTGGAACACGCCCAC 702557 Query 8113 GCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 |||||| || || || || | || || ||||| || Sbjct 702558 GCACGAGTAGGTCGTGCCCAGGTCGATGCCGATCGC 702593 >seq1486 Length=5863 Score = 297 bits (328), Expect = 2e-75 Identities = 818/1236 (66%), Gaps = 32/1236 (3%) Strand=Plus/Minus Query 6926 GTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAAC 6985 ||||| | || ||| || || || || || ||||| || | |||||||| || | | Sbjct 1255 GTCATCACGCCGCCCGCCGTCTCCAGCCCCAGCGACAGCGGCGCCACGTCCAGCAGCAGC 1196 Query 6986 AGGTCTTGAACAGATTCGTTCC--CTT--CACCCGTTAAGATGGCGGCTTGGACCGTCGC 7041 ||||| || || ||| ||| ||| | ||| | | |||||| || || || | ||| Sbjct 1195 AGGTCCTGCACG--TTC--TCCGACTTGTCGCCCATCAGGATGGCCGCCTGCACGGCCGC 1140 Query 7042 CCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATA 7101 ||||| || |||||||| || ||||| || | || || || || ||||| || | Sbjct 1139 GCCGTACGCCACCGCCTCGTCCGGGTTGATGCTCTTGTTGAGCTCGCGCCCGTTGAAGAA 1080 Query 7102 ATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTC 7161 ||| | || | || | || ||||| || || || || || |||| || | || Sbjct 1079 GTCCTGCAGCAGCTTCTGCACCTTGGGGATGCGCGTGGAGCCGCCCACCAGCACCAGGTC 1020 Query 7162 ATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACA 7221 | | | || || || | ||| | ||| || || | || || || || |||| Sbjct 1019 GTGGATCTGCGCCTTGTCCAGCTTGGCGTCGCGCAGCGCCTTCTCCACGGGCTCCAGCGT 960 Query 7222 TTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAA 7281 ||||||| |||| ||||| ||||| || || || || || ||||| || ||||| Sbjct 959 GCCGCGGAACAGGTCCGAGCACAGCTCCTCGAAGCGCGCCCGCGTGATGGACGTGTAGAA 900 Query 7282 ATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTG---TTTGTGCCGTCGAAGATAA 7338 || | ||| ||||| | || || || || | ||||| | |||| | || || | Sbjct 899 GTCGATGCCCTCGTAGAGTGAGTCGATCTCCA-GGTTGGCCTGCGTGCTG--GACGACAG 843 Query 7339 CGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGA 7398 ||| ||||| || ||||| |||||||| || | || || | ||| ||| ||| | Sbjct 842 CGTGCGCTTGGCCCGCTCGCACGCCGTGCGCAGCCGCCGCACGGCGCGCTTGTTCTGGCT 783 Query 7399 AATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATC 7458 || || ||||| || || | || ||||| || |||||| | | || | || Sbjct 782 GATGTCCTTCTTGTGCTTCCTCTTGAACTCCTCCACGAAGTGGCTCACCAGCCGGTTGTC 723 Query 7459 GAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCC 7518 ||| || || || |||| ||| || || ||||| || || || || || ||||| || | Sbjct 722 GAAGTCCTCGCCGCCCAGGTGCGTGTCGCCCGCCGTGGCCTTCACCTCGAAGATGCCGTC 663 Query 7519 TTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT 7578 || ||| | | | || || || ||||| || || |||||||| || ||||| ||||| Sbjct 662 GTCGATGGTCAGGATGGACACGTCGAACGTGCCCCCGCCCAGGTCGAAGATGAGCACGTT 603 Query 7579 CGTATCG-TCGTCTTTGTTCTTA---TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 || || | ||| ||| || || ||||| ||||| || |||||||| || | Sbjct 602 G----CGCTCCCCCTTGCCCTTGCGGTCCAGCCCGTAGGCGATGGCGGCCGCCGTGGGCT 547 Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 | || || || | || ||| ||||| || || |||| || || ||||| || | Sbjct 546 CGTTGATGATCCTCAGCACGTTGAGGCCCGCGATCACGCCCGCGTCCTTGGTCGCCTGCC 487 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754 | ||||| ||||| ||||| ||||| ||||| | ||||||| | || || || | Sbjct 486 GCTGCGAGTCGTTGAAGTACGCCGGCACCGTGATCACCGCGTTGCTCACCGCCTGGCCCA 427 Query 7755 GATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCG 7814 | |||| || ||||| || ||||| ||||| || |||||||| || ||||| || | Sbjct 426 GGTACGCCTCGGCGATCTCCTTCATCTTGGTCAGCACCATCGACGAGATCTCCTCCGGGT 367 Query 7815 CAAACTGTTTCGTTTCACCGTTAAAA-TCAACTTCAATCATGGGTTTATCCGCAGCACCG 7873 ||| || | || || || | ||| || || | |||| || || || | || Sbjct 366 AGAACGCCTTGCTCTCCCCCTTGTAGCTCACCTGCAC-CTTGGGCTTGTC-GC--CCTCG 311 Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTT 7933 | |||| ||| ||| | ||||| || || ||| |||| ||||| Sbjct 310 CTCACCACCTGGAACGGCCAGTGCTTCATGTCCGACTGCACCACCGGGTCGCCGAACTTG 251 Query 7934 CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTC 7993 | ||||| || ||||| || || || || ||||| | ||||||||||| |||||| Sbjct 250 CGCCCGATCAGCCGCTTCGCGTCGAACACCGTGTTCTGCGGGTTCATGGCCACCTGGTTC 191 Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG-GT 8052 || |||||||| ||||| ||||| || | ||||| || || ||||| | |||| || Sbjct 190 TTGGCCGCGTCGCCGATCAGACGCTC---CGTGTCCGTGAAGGCCACGTA-GCTGGGCGT 135 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112 || || || || |||||||| || || || || || | ||| || | ||||| || Sbjct 134 GGTGCGGTTGCCCTGGTCGTTGGCGATGATCTCCACCTTGCCGTGCTGGAACACGCCCAC 75 Query 8113 GCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 |||||| || || || || | || || ||||| || Sbjct 74 GCACGAGTAGGTCGTGCCCAGGTCGATGCCGATCGC 39 >seq3 Length=63406555 Score = 210 bits (232), Expect = 3e-49 Identities = 794/1235 (64%), Gaps = 18/1235 (1%) Strand=Plus/Minus Query 6565 CTTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTT 6624 ||| |||||||| |||| ||||||| || ||||||||||||| ||||| ||||| || Sbjct 58827623 CTTCTCATCTTCG-CTTTGCACTTTTCAGCTTCTTGGACCATCTGCTCAATATCTTCCTT 58827565 Query 6625 CGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATC 6684 | || ||||| ||||| || || || ||||| | ||| || | | ||| || Sbjct 58827564 GCACAAATGGCCCTTGTCATTAGTGATGGTGATCTTGTTCTCTTTCCCAGTGCTCTTTTC 58827505 Query 6685 TTCAGCACTTACATTCAAA--ATACCATTTGCATCAACATCGAACCTTACATTAATTTGT 6742 ||||| | || | || || | | ||||||| ||| || | || | ||| || Sbjct 58827504 CACAGCAG--AGATGCTAAGGATGCTGCTGGCATCAATATCAAAGGTGACTTCAATCTGA 58827447 Query 6743 GGTGTACCCCTCGGTGCG--GCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGT 6800 || || || || | | ||| || || | ||||| | ||||| | | ||| Sbjct 58827446 GGA--ACGCCATGGGTCATAGGTGGTATGGTGGTGAGTTCAAACTTGCCAAGCAGATTGT 58827389 Query 6801 TATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTAT 6860 ||||| | | | | | | ||||||||||| || | ||| ||| |||| || || | Sbjct 58827388 TATCCTTGGTCATAGCATGCTCACCTTCATAAACCTGAATGAGCACACCAGGCTGGTTGT 58827329 Query 6861 CTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAA 6920 || || | |||| | | ||| | ||||| || || || | || | Sbjct 58827328 CTGAGTAGGTGGTGAAGGTCAACATCTGCTTGGTGGGAATTGTGGTGTTGTGCTTGATGA 58827269 Query 6921 CCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGA 6980 | |||||| | ||| | ||| || | ||||| || | ||| || || ||||| | Sbjct 58827268 GCATGGTCATGACTCCATCAGCAGTCTCAATGCCAAGGGAGAAAGGAGTGACATCCAACA 58827209 Query 6981 GTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCG 7040 | ||||| || ||||| || | || || | | |||||| || || || | Sbjct 58827208 GCAACAGATCCTGAACGTTCTCAGACTTGTCTCCAGACAGGATGGCTGCCTGCACAGCTA 58827149 Query 7041 CCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAAT 7100 | || || || || | |||||| || || || | |||||||| ||||| || | || Sbjct 58827148 CACCATAAGCCACAGTCTCATCAGGATTGATGCTCTTATTCAGCTCTTTCCCACTGAAGG 58827089 Query 7101 AATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTT 7160 | ||| | | | || || || || |||| || || ||||| || | || || | Sbjct 58827088 AGTCCTGAAGCGGCTTCTGGATCTTGGGAATTCTGGTGGAACCACCCACTAGGACAATGT 58827029 Query 7161 CATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATAC 7220 ||| ||| || || | ||| | || ||| | || | ||||| |||| Sbjct 58827028 CATGGGTCCACGACTTGTCTAACTTGGCATCCAGAACAGCCTTCTTAACAGGGCCCATGG 58826969 Query 7221 ATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGA 7280 |||||| ||| || || |||||||| | || ||||||||||| || ||| Sbjct 58826968 TGCCACGGAA-AAGATCA---AC---TCCTCAAATCAAGCCCGGGTAATGGAGGTGCAGA 58826916 Query 7281 AATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACG 7340 | |||| || || || || |||| || |||||| | | || | | ||||| | | Sbjct 58826915 AGTCAATTCCTTCATACAAATAATCTATCTCAATGCTCGCCTGGGTGCTGGAAGAGAGGG 58826856 Query 7341 TTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAA 7400 | ||||| || |||||||| || || | | | | | || | | ||| | | Sbjct 58826855 TGCGCTTAGCCCGCTCACAAGCAGTGCACAGGCACCTGACAGCTCTCTTGTTCTCACTGA 58826796 Query 7401 TATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCG 7459 | || |||||||| || | ||| |||||| || ||| || | || | | || Sbjct 58826795 TGTCCTTCTTATGCTTGCATTTGAACTCTGCAATGAAATGGTTGACCTTG-CGGTTGTCA 58826737 Query 7460 AAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCT 7519 || ||||| ||||| || || || || || || | | ||||| |||||| | || || Sbjct 58826736 AAGTCTTCTCCACCTAAATGGGTGTCTCCAGCTGCGGACTTGACCTCAAAGGTTCCATCT 58826677 Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTC 7579 |||| | | | || ||||| ||||| ||||| |||||||||||||| | || || Sbjct 58826676 TCAACTGTGAGGATAGACACATCGAACGTGCCACCTCCCAGGTCAAAAATCACCACATTT 58826617 Query 7580 GTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTA 7639 | || | || ||||| || || || || || ||||| || || ||||| ||||| Sbjct 58826616 TTTTCAGCCTCAACCTTCTTGTCCAGGCCATAAGCAATAGCAGCAGCAGTTGGCTCATTG 58826557 Query 7640 ATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGC 7699 || || | |||| || || |||||||| ||| | || ||||| || || || || || Sbjct 58826556 ATGATCCAAAGAACATTTAGACCAGCAATGGTTCCAGCGTCTTTGGTGGCCTGACGCTGA 58826497 Query 7700 GAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATAC 7759 || || || ||||||| | || || || || |||| || | |||| || || || Sbjct 58826496 GAGTCATTGAAGTAGGTGGACACTGTGACCACAGCGTTGGTAAGAGTCTTGCCAAGGTAG 58826437 Query 7760 GATTCCGCGATATCTTTCATTTTGGTAAGAACCAT 7794 | ||| ||||| || |||||||||| |||||||| Sbjct 58826436 GCTTCTGCGATCTCCTTCATTTTGGACAGAACCAT 58826402 >seq21 Length=30942271 Score = 174 bits (192), Expect = 2e-38 Identities = 366/543 (67%), Gaps = 6/543 (1%) Strand=Plus/Minus Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || || || || || |||||||||||||| || | || ||||| ||||| || || || Sbjct 873828 GCACCATAGGCCACAGCCTCATCGGGGTTGATGCTCTTGTTCAGCTCTTTCCCATTGAAG 873769 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 ||||| | || || || || || || |||| || || || || |||| || || Sbjct 873768 AAATCCTGGAGCAGTTTCTGGATCTTGGGAATTCTGGTAGAACCGCCCACCAGGACTATG 873709 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 |||| | | ||| || || | ||| | |||||||| | || |||||||| |||| Sbjct 873708 TCATGGATCTGCGACTTGTCTAACTTGGCATCTCGAAGGGCCTTCTCGACAGGGTCCAGG 873649 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 |||||| | ||| | || || ||||| || || ||||||||||| || ||| Sbjct 873648 GTGCCACGGAAAAGGTCAGCATTCAACTCTTCAAATCGAGCCCGGGTAATGGAGGTGTAG 873589 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || || | || || || | ||||| || |||||| | | || | | ||||| | Sbjct 873588 AAGTCGATTCCTTCATACAGAGAATCTATCTCAATGCTCGCCTGGGTGCTGGAAGACAGG 873529 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || ||||| || |||||||| || || || | || | | || | | ||| | Sbjct 873528 GTGCGCTTAGCCCGCTCACAAGCAGTGCGCAGGCGCCTGACTGCTCTCTTGTTCTCACTG 873469 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT-GTCGA--AGGAGTCTCGAA 7456 || || |||||||| || || || |||||| || ||| | || || | | | | Sbjct 873468 ATGTCCTTCTTATGCTTGCGCTTGAACTCTGCAATGAAATGGTTGACCATGCGGTT---G 873412 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || ||||| ||||||| || || || || || || | ||||| |||||||| || Sbjct 873411 TCAAAGTCTTCTCCACCCAGATGGGTGTCTCCAGCTGTGGACTTGACCTCAAAGATTCCA 873352 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 ||||||| | | | || ||||| || || ||||| |||||||||||||| || || Sbjct 873351 TCTTCAATTGTGAGGATAGACACATCGAAAGTGCCACCTCCCAGGTCAAAAATCAGCACA 873292 Query 7577 TTC 7579 ||| Sbjct 873291 TTC 873289 >seq1 Length=83735184 Score = 134 bits (148), Expect = 2e-26 Identities = 232/336 (69%), Gaps = 1/336 (0%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || ||||| ||||| || || || || || || | ||||| |||||||| || Sbjct 30245541 TCAAAGTCTTCTCCACCTAAATG-GTGTCTCCAGCTATGTACTTGACCTCAAAGATTCCA 30245599 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 |||||| | | | || || ||||| || ||||| || ||||||||||| || || Sbjct 30245600 GATTCAATTGTGAGGATAGACACGTCAAAAGTGCCACCTCCAAGGTCAAAAATCAGCACA 30245659 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || | || | | ||| | | ||||| || || ||||| || || ||||| || Sbjct 30245660 TTTCTTTCAGCCCCAAACTTCCTGTGCAGACCATAAGCAATAGCAGCAGCAGTTGGCTCG 30245719 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || || |||||| || || |||||||| ||||| || ||||| | | || || Sbjct 30245720 TTGATGATCCGAAGAACATTGAGACCAGCAATGGTTGCAGCGTCTTTGGCGGTCTGACGC 30245779 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || || | ||| |||||||| || || || || || |||| || || |||| || || Sbjct 30245780 TGAGAGTTGTTTAAGTAGGCAGGCACTGTGACCACAGCGTTGGTAACAGTCTTGCCAAGG 30245839 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACC 7792 || | ||| | || || |||||||| || |||||| Sbjct 30245840 TAGGCTTCTTCAATCTCCTTCATTTTTGTCAGAACC 30245875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635050066013640