Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ochotona_20princeps_20[refseq_20GCF_5F000292845.1_202012-08-27] 10,421 sequences; 2,229,840,584 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq65 170 4e-37 seq67 168 2e-36 seq42 167 5e-36 seq17 167 5e-36 seq6 163 7e-35 seq76 159 8e-34 seq49 159 8e-34 seq24 149 1e-30 seq40 145 2e-29 seq58 123 6e-23 seq3 114 3e-20 seq26 111 4e-19 seq4 111 4e-19 seq21 93.3 1e-13 seq12 93.3 1e-13 seq89 89.7 1e-12 seq30 86.0 1e-11 seq144 84.2 5e-11 seq8 84.2 5e-11 >seq65 Length=10584338 Score = 170 bits (188), Expect = 4e-37 Identities = 175/226 (77%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| ||||| || || || || ||||| ||||| || || ||||| || |||| | || Sbjct 10481001 ACGGAGTCTCAGCACCAGATGCAGAGTAGACTCCTTCTGAATGTTGTAGTCCGATAAAGT 10480942 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||| ||||||||||||||| || ||||| || | ||| || || |||||| ||| Sbjct 10480941 TCGGCCATATTCCAGCTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCCAGAGGAATTCC 10480882 Query 211013 TTCCTTGTCCTGGATCTTTTG-TTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGA 211071 |||||| ||||||| |||| | ||| |||||||| || || || ||| |||||||||| Sbjct 10480881 TTCCTTATCCTGGA-CTTTGGCTTTTACGTTTTCTATCGTATCCGAGGGCTCAACCTCGA 10480823 Query 211072 GAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 | ||||| ||||| || || || ||||| ||||| |||||||| || Sbjct 10480822 GGGTGATGGTCTTGCCTGTAAGGGTCTTGACAAAGACCTGCATCTT 10480777 >seq67 Length=9509266 Score = 168 bits (186), Expect = 2e-36 Identities = 168/218 (77%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| || || ||||| |||||| |||| || || ||||| ||||| | | | | Sbjct 6398373 AGTCTCAGCACCAGGTGCAGAGTGCACTCCTTCTGAATGTTGTAATCAGATAAACTTCGG 6398314 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 |||||||||||||||||||| || ||||| || | ||| || || ||||||| ||||||| Sbjct 6398313 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCTGGAGGAATTCCTTCC 6398254 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 || |||||||| || || || ||||| || || || ||| ||||||||||| ||| Sbjct 6398253 TTATCCTGGATTTTGGCTTATACATTTTCTATTGTATCCGAGGGCTCAACCTCGAGGGTG 6398194 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||||| || ||||| ||||| | |||||| Sbjct 6398193 ATGGTCTTGCCCGTAAGGGTCTTGACAAAGATCTGCAT 6398156 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 5/125 (4%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || ||||| || |||||||| ||||| | ||||| | |||||| Sbjct 5348246 AGGACCAGGTGCAGGGTAGACTCCTTCTGGATGTTGTAATCGGACAGGGTGCGGCCATCT 5348187 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| || ||| ||| ||| | |||| ||| ||| Sbjct 5348186 TCTAGCTGCTTGCCAGCAAAGATCAG-----CTTGTCCAGAAGGGATGCCTTTCTTATCC 5348132 Query 211023 TGGAT 211027 ||||| Sbjct 5348131 TGGAT 5348127 >seq42 Length=18384968 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || ||||||||||| |||||||| || || | || || | ||||| Sbjct 13800110 AGCACCAGGTGCAGCGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTGCGACCATCC 13800051 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||||| || ||||| || || || ||||| || || | || ||||||||| Sbjct 13800050 TCCAGCTGCTTGCTGGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 13799991 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||||||||||||||| | || |||||||| ||||| ||| Sbjct 13799990 TGGATCTTGGTCTTGACGTTTTCGATGGTGTCGCTGGGCTCCACCTCGAGGGTGATGGTC 13799931 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || |||||||| || | |||||| Sbjct 13799930 TTGCCCGTCAGGGTCTTTACGAAGATCTGCAT 13799899 >seq17 Length=35549867 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || |||||||| ||||||||||| || || | ||||| | |||||| Sbjct 30593103 AGGACCAGGTGCAGGGTGGACTCCTTTTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 30593044 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||||||||| ||||| || | | ||||| ||||| | |||||||| ||| Sbjct 30593043 TCCAGCTGCTTGCCTGCAAAGATCAGCCTCTTCTGGTCGGGAGGGATGCCTTCCTTATCC 30592984 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||||||||| | |||||||| || ||||| ||| Sbjct 30592983 TGGATCTTGGCCTTGACATTCTCGATGGTGTCGCTGTGCTCAACCTCCAGGGTGATGGTC 30592924 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || | || || ||||| ||||| | |||||| Sbjct 30592923 TTGCTGGTCAGGGTCTTCACAAAGATCTGCAT 30592892 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| || || || || ||||||||||| || || | ||| || || | | | | Sbjct 25101816 AGTCTCAGCACCAGATGCAGAGTGGACTCCTTCTGAAGGTTGTAGTCAGATAAACTTCGG 25101875 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 |||||||||||||||||||| || ||| | || | ||| || || ||||||| |||||| Sbjct 25101876 CCATCTTCCAGCTGCTTGCCAGCAAAGGTCAGTCTTTGCTGATCCGGAGGAATGCCTTCC 25101935 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 || |||||||| || ||| || | ||| || || || ||| |||| ||| || ||| Sbjct 25101936 TTTTCCTGGATTTTGGCTTTTACATGTTCTATCGTATCTGAGGGCTCAATCTCAAGGGTG 25101995 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || |||||||| || || | |||||| Sbjct 25101996 ATGGTCTTGCCTGTAAGAGTCTTGACGAAGATCTGCAT 25102033 >seq6 Length=51880498 Score = 163 bits (180), Expect = 7e-35 Identities = 166/215 (77%), Gaps = 1/215 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || |||||||| || |||||||| || || | ||||| | |||||| Sbjct 47505270 AGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 47505211 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||||||||| ||||| || | || ||||||||||| | |||||||| || Sbjct 47505210 TCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTT-ACC 47505152 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||||||||| | ||| ||||| || ||||| ||| Sbjct 47505151 TGGATCTTGGCCTTGACATTCTCGATGGTGTCGCTGGGTTCCACCTCCAGGGTGATGGTC 47505092 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || || || ||||| || || | |||||| || Sbjct 47505091 TTGCCGGTCAGGGTCTTCACGAAGATCTGCATCTT 47505057 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| ||||| || || ||||| ||||||||||| || || ||||| || || | || Sbjct 32416402 ACGGAGTCTCAGCACCAGGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTCAGATGAAGT 32416343 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 |||||||||||||||||||| || ||||| | | ||| || || ||||||| ||| Sbjct 32416342 TTGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAATCTTTGCTGATCCGGAGGAATTCC 32416283 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||| |||||| | || ||| || ||||| || || || ||| || |||| || Sbjct 32416282 TTCCTTATCCTGGGTTTTGGCTTTTACATTTTCTATCGTATCCGAGGGCTCTTCCTCTAG 32416223 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| ||||| || |||||||| || | |||||| Sbjct 32416222 GGTGATGGTCTTGCCCGTAAGGGTCTTTACGAAGATCTGCAT 32416181 >seq76 Length=7797616 Score = 159 bits (176), Expect = 8e-34 Identities = 170/223 (76%), Gaps = 1/223 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || |||||||| || |||||||| || || | ||||| | || ||| Sbjct 4980825 AGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCGTCT 4980884 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||||||||| ||||| || | || ||||| ||||| | |||||||| ||| Sbjct 4980885 TCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATCC 4980944 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||||||||| | || ||||| || ||||| ||| Sbjct 4980945 TGGATCTTGGCCTTGACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTC 4981004 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTATGGTTAC 211125 || || || || ||||| || || | ||||||| | | ||||| Sbjct 4981005 TTGCCAGTCAGGGTCTTCACGAAGATCTGCATTGTCT-GTTAC 4981046 >seq49 Length=14824766 Score = 159 bits (176), Expect = 8e-34 Identities = 160/208 (77%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 || |||| || |||||||| || |||||||| || || | ||||| | ||| ||||||| Sbjct 11086303 CAGGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCGTCTTCCA 11086244 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 ||||||||||||| ||||| || | || ||||| ||||| | ||||| || ||||||| Sbjct 11086243 GCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTATCCTGGA 11086184 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 |||| || || |||||||||||||| | ||| ||||| || ||||| ||||| | Sbjct 11086183 TCTTGGCCTTGACATTTTCGATGGTGTCGCTGGGTTCCACCTCCAGGGTGATGGTCTTGC 11086124 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114 | || || ||||| || || | |||||| Sbjct 11086123 CAGTCAGGGTCTTCACGAAGATCTGCAT 11086096 >seq24 Length=26830293 Score = 149 bits (164), Expect = 1e-30 Identities = 161/212 (76%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || |||||||| || |||||||| || || | ||||| |||||| Sbjct 11934354 AGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGTGGCCATCT 11934295 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||||||||| ||||| || | || || || ||||| | |||||||| ||| Sbjct 11934294 TCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGTTCGGGAGGGATGCCTTCCTTATCC 11934235 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||| || ||| | || ||||| || ||||| ||| Sbjct 11934234 TGGATCTTGGCCTTGACATTCTCGAT-GTTTCATTGGGCTCCACCTCCAGGGTGATGGTC 11934176 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| ||||| | |||||| Sbjct 11934175 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 11934144 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || |||||||| || |||||||| || || | ||||| | |||||| Sbjct 11934127 AGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 11934068 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGG 211003 ||||||||||||||||| ||||| || | || ||||| || Sbjct 11934067 TCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCGGG 11934027 >seq40 Length=19049039 Score = 145 bits (160), Expect = 2e-29 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || |||||||| || |||||||| || || | ||||| | ||| Sbjct 15841330 AGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGTTGTCT 15841271 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||||||||| ||||| || | || ||||| ||||| | |||||||| ||| Sbjct 15841270 TCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATCC 15841211 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||||||||| | || ||||| || ||||| ||| Sbjct 15841210 TGGATCTTGGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGACCTCCAGGGTGATGGTC 15841151 Query 211083 TTTCCCGTGAGAGTCTTTACAAA 211105 || || || || ||||| ||||| Sbjct 15841150 TTGCCGGTTAGGGTCTTGACAAA 15841128 >seq58 Length=12492363 Score = 123 bits (136), Expect = 6e-23 Identities = 119/153 (78%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| | |||||||| || |||||||| || || | ||||| | |||||| Sbjct 9398043 AGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 9398102 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||| | ||||||||| ||||| || | || ||||| ||||| | |||||||| ||| Sbjct 9398103 TCCAGTTCCTTGCCTGCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATCC 9398162 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCA 211055 |||||||| || || || |||||||||||| Sbjct 9398163 TGGATCTTGGCCTTGACATTCTCGATGGTGTCA 9398195 >seq3 Length=63406555 Score = 114 bits (126), Expect = 3e-20 Identities = 155/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| || ||||||||||| |||||||| || | | ||||| | ||| Sbjct 63015598 AGGACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGACAGACAGGGTACGGTTGTCT 63015657 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| ||||||| ||||| | | || ||||||||||| | |||||||| ||| Sbjct 63015658 CCCAGCTGCCTGCCTGCAAAGATCAACCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCC 63015717 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGT--CAGAGCTTTCAACCTCGAGAGTGATCG 211080 |||||||| || || || || ||||||| | | |||| ||||| | ||| | | Sbjct 63015718 TGGATCTTCGCCTTGACATTCTCTATGGTGTCGCTGGGCTT--GACCTCCGGGGTGGTGG 63015775 Query 211081 TCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||| || || | ||||| || || | |||||| Sbjct 63015776 TCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 63015809 >seq26 Length=25362064 Score = 111 bits (122), Expect = 4e-19 Identities = 130/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || ||||||| || |||||||| || || | | ||| |||||| Sbjct 23898023 AGGACCAGGTGCAGGGTGGACTTCTTCTGGATGTTGTAGTCAGACAAGGTGTGGCCATCT 23897964 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || | || ||||||||||| |||||||| || Sbjct 23897963 TCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGGCTGCCTTCCTTATCT 23897904 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 |||||| | || || || ||||||||||| | ||| ||||| || || || Sbjct 23897903 TGGATCATGGCCTTGACATTCTCGATGGTGTCGCTGGGTTCCACCTCCAGGGTTAT 23897848 >seq4 Length=59374630 Score = 111 bits (122), Expect = 4e-19 Identities = 151/211 (72%), Gaps = 5/211 (2%) Strand=Plus/Plus Query 210895 GAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCC 210954 ||||||| |||| || ||||||||||| |||| ||||| || || | | || Sbjct 23529050 GAAGTCTCAGGA-----TGTAGAGTGGACTCCGTTTGAATGTTGTAGTCAGATAAAGTTT 23529104 Query 210955 TTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTT 211014 ||||||||||||||||||||| | ||| | | || || | |||||||||||||| Sbjct 23529105 GTCCATCTTCCAGCTGCTTGCCAACAGCGATCAATCTGTGCTGATTAGGAGGAACTCCTT 23529164 Query 211015 CCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAG 211074 |||| || ||||| || |||| | ||||| || | | || ||||||| ||| Sbjct 23529165 CCTTATCTTGGATTTTGGTTTTCCCATTTTCTATCATATTTGAAGGCTCAACCTTGAGGA 23529224 Query 211075 TGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 |||| ||||| || || || ||||| ||||| Sbjct 23529225 TGATGGTCTTGCCTGTAAGGGTCTTGACAAA 23529255 >seq21 Length=30942271 Score = 93.3 bits (102), Expect = 1e-13 Identities = 111/151 (74%), Gaps = 5/151 (3%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||| ||||| | |||||||||||| |||||||| |||| | ||| || |||||| Sbjct 13470263 AGGATCAGGTGCAAAGTGGACTCTTTCTGGATGTTTAAATCAGAAAGAGTGTGGCCATCT 13470322 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| |||| ||| | ||| || || ||||||| | |||||||| ||| Sbjct 13470323 TCCAGCTGTTTGCTTGCAAGGATTAGCTTCTGCTGGTCAG-----ATGCCTTCCTTATCC 13470377 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGT 211053 ||||| || || || ||||| ||||||| Sbjct 13470378 TGGATTTTAGCCTTGACATTTTCAATGGTGT 13470408 >seq12 Length=43805204 Score = 93.3 bits (102), Expect = 1e-13 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 210895 GAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCC 210954 ||||||| | ||||| | | ||||||||| ||||| |||| ||||| | || Sbjct 34807100 GAAGTCTCAACACAAGATATAAAGTGGACTCCTTTTGAATGTGGTAATCAGATTAAGTTT 34807159 Query 210955 TTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTT 211014 |||||||||||| |||||||| | ||||| | |||||| |||||||||| ||||| Sbjct 34807160 GTCCATCTTCCAGTTGCTTGCCGGTAAAGATCAATATTTGTTGATCAGGAGGAATTCCTT 34807219 Query 211015 CCTTGTCCTGGATCTT 211030 |||| | |||||| || Sbjct 34807220 CCTTATTCTGGATTTT 34807235 >seq89 Length=4604762 Score = 89.7 bits (98), Expect = 1e-12 Identities = 152/217 (70%), Gaps = 15/217 (7%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || ||||||||||| |||||||| || |||| | | | || || Sbjct 833653 AGCACCAGGTGCAGCGTGGACTCTTTCTGGATGTTGTAGTCCGACGGACTGCGGCCGTCC 833712 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||| |||||||| || | | || ||||| | ||||| || || |||||| Sbjct 833713 TCCAGATGCTTGCCGGCCA---------GCTGCTGGTCCAGGGGAACGCCGTCTTTGTCC 833763 Query 211023 TGGATCTT-TTGTTTCACGTTTTC-GATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCG 211080 |||||||| | || | |||||| | ||||| | | || ||||| |||||| | Sbjct 833764 TGGATCTTCATCTTGAAGGTTTTCGGGTGGTGCCGTTGGGCTCCACCTC---AGTGATGG 833820 Query 211081 TCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 |||| |||| || |||| |||||| ||||||||| Sbjct 833821 TCTTGCCCG-AAGGGTCTCCGCAAACATCTGCATTTT 833856 >seq30 Length=25365230 Score = 86.0 bits (94), Expect = 1e-11 Identities = 150/217 (69%), Gaps = 15/217 (7%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || ||||||||| | ||||||||| | | || ||| ||| Sbjct 16538369 AGCACCAGGTGCAGCGTGGACTCTCTCTGGATGTTA-AGTGCG-----GTC-----ATCC 16538417 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| ||||||| | || ||||| || || || ||||| || || | || || | |||| Sbjct 16538418 TCCAACTGCTTGTCGGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCTTCGTCC 16538477 Query 211023 TGGATCTT----TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 |||||||| ||| ||||||| || |||||| | || ||||| || || || Sbjct 16538478 TGGATCTTCGCCTTGAAAAACGTTTTTGAAGGTGTCGCTGGGCTCCACCTCAAGCGTAAT 16538537 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || || || || ||||| | || | ||||||| Sbjct 16538538 GGTGTTGCCTGTCAGGGTCTTCATGAAGATCTGCATT 16538574 >seq144 Length=1538201 Score = 84.2 bits (92), Expect = 5e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || |||||||| || |||||||| || || | ||||| | |||||| Sbjct 1533690 AGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 1533749 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||| |||| | || || || | | |||||| ||| | |||||||| ||| Sbjct 1533750 TCCAGCTGCTAGCCTACAAACATCAGTCTCTACTGGTCAACAGGGATGCCTTCCTTATCC 1533809 Query 211023 T 211023 | Sbjct 1533810 T 1533810 >seq8 Length=54109746 Score = 84.2 bits (92), Expect = 5e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || || || |||||||| || |||||||| || || | ||||| | |||||| Sbjct 40062431 AGGACCAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 40062372 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAG 210988 ||||||||||||||||| ||||| || Sbjct 40062371 TCCAGCTGCTTGCCTGCAAAGATCAG 40062346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158997231111665