Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ochotona_20princeps_20[refseq_20GCF_5F000292845.1_202012-08-27] 10,421 sequences; 2,229,840,584 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq42 170 4e-37 seq6 132 1e-25 seq76 125 1e-23 seq65 120 6e-22 seq17 120 6e-22 seq49 114 3e-20 seq24 114 3e-20 seq58 113 9e-20 seq40 100 6e-16 seq3 100 6e-16 seq15 98.7 2e-15 seq26 95.1 3e-14 seq7 95.1 3e-14 seq84 89.7 1e-12 seq72 89.7 1e-12 seq37 89.7 1e-12 seq30 89.7 1e-12 >seq42 Length=18384968 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| |||||||| || ||||| || | |||| ||||| |||||||||||||| | Sbjct 13800125 CCACCCCGCAGGCGGAGCACCAGGTGCAGCGTGGACTCTTTCTGGATGTTGTAGTCGGAC 13800066 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| |||||||| || || || | ||||||||| | ||| || ||||| || Sbjct 13800065 AGAGTGCGACCATCCTCCAGCTGCTTGCTGGCAAAGATGAGACGCTGCTGGTCCGGGGGG 13800006 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| | || ||| | ||||| ||||| | || || Sbjct 13800005 ATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTTTCGATGGTGTCGCTGGGCTCCACC 13799946 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| ||||||| ||||| ||||| |||||||| Sbjct 13799945 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTTACGAAGATCTGCAT 13799899 >seq6 Length=51880498 Score = 132 bits (146), Expect = 1e-25 Identities = 170/233 (73%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | || || || ||||| || | ||| || || |||||||||||||||| Sbjct 47505285 CCACCCCTAAGACGGAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 47505226 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||||||||| || || || || || |||||||||| | || |||||| || Sbjct 47505225 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGAGGG 47505166 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||| | |||||||| || || || | ||||| ||||| | ||| || Sbjct 47505165 ATGCCTTCCTT-ACCTGGATCTTGGCCTTGACATTCTCGATGGTGTCGCTGGGTTCCACC 47505107 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTCAT 283105 || || ||||| ||||| || |||| ||||| ||||| |||||||| || || Sbjct 47505106 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATCTTGAT 47505054 Score = 123 bits (136), Expect = 5e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || | || ||||| || | ||| || || || ||||||||||||| Sbjct 32416408 ACCACCACGGAGTCTCAGCACCAGGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTCAGA 32416349 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||||| || || || || || ||||||||||| | ||| || || || Sbjct 32416348 TGAAGTTTGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAATCTTTGCTGATCCGGAGG 32416289 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || ||||| || ||| | || |||||||| | || || || ||||| | || | Sbjct 32416288 AATTCCTTCCTTATCCTGGGTTTTGGCTTTTACATTTTCTATCGTATCCGAGGGCTCTTC 32416229 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| ||||| | ||||| ||||| |||||||| Sbjct 32416228 CTCTAGGGTGATGGTCTTGCCCGTAAGGGTCTTTACGAAGATCTGCAT 32416181 >seq76 Length=7797616 Score = 125 bits (138), Expect = 1e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944 || || ||||| || | ||| || || |||||||||||||||| || |||||||| Sbjct 4980822 CGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCG 4980881 Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004 || || || || || || |||||||||| | || ||||| || || || ||||| Sbjct 4980882 TCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTA 4980941 Query 283005 TCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATC 283064 || |||||||| || || || | ||||| ||||| | || || || || ||||| Sbjct 4980942 TCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATG 4981001 Query 283065 GTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTCATATACAA 283111 ||||| || |||| ||||| ||||| ||||||||| || ||||| Sbjct 4981002 GTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATTGTCTGTTACAA 4981048 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 4995221 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 4995163 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 4997989 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 4997931 >seq65 Length=10584338 Score = 120 bits (132), Expect = 6e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || | || |||||||| | || || || || ||||||||||| | Sbjct 10481007 ACCACCACGGAGTCTCAGCACCAGATGCAGAGTAGACTCCTTCTGAATGTTGTAGTCCGA 10480948 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || ||||||| || || || || || |||||||||| | ||| || || || Sbjct 10480947 TAAAGTTCGGCCATATTCCAGCTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCCAGAGG 10480888 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || ||||| || |||| || ||||||||| | || || || ||||| | || || Sbjct 10480887 AATTCCTTCCTTATCCTGGACTTTGGCTTTTACGTTTTCTATCGTATCCGAGGGCTCAAC 10480828 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||||| ||||| ||||| || || | ||||| || || | |||||| || Sbjct 10480827 CTCGAGGGTGATGGTCTTGCCTGTAAGGGTCTTGACAAAGACCTGCATCTT 10480777 >seq17 Length=35549867 Score = 120 bits (132), Expect = 6e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | || || || ||||| || | ||| || ||||||||||||||||||| Sbjct 30593118 CCACCCCTAAGACGGAGGACCAGGTGCAGGGTGGACTCCTTTTGGATGTTGTAGTCAGAC 30593059 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||||||||| || || || || || |||||||||| | | ||||| || Sbjct 30593058 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTTCTGGTCGGGAGGG 30592999 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTC-CGAAGCTTCGAC 283051 || || ||||| || |||||||| || || || | ||||| ||||| | || || || Sbjct 30592998 ATGCCTTCCTTATCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCGCTGTGC-TCAAC 30592940 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| | |||| ||||| || || |||||||| Sbjct 30592939 CTCCAGGGTGATGGTCTTGCTGGTCAGGGTCTTCACAAAGATCTGCAT 30592892 Score = 109 bits (120), Expect = 1e-18 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||| | || | || |||||||| | ||| || || || | ||||||||||| Sbjct 25101806 ACCACCATGGAGTCTCAGCACCAGATGCAGAGTGGACTCCTTCTGAAGGTTGTAGTCAGA 25101865 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | | |||||||| || || || || || |||||| ||| | ||| || || || Sbjct 25101866 TAAACTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAGGTCAGTCTTTGCTGATCCGGAGG 25101925 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || ||||| || ||||| || |||||||| || || || || || | || | Sbjct 25101926 AATGCCTTCCTTTTCCTGGATTTTGGCTTTTACATGTTCTATCGTATCTGAGGGCTCAAT 25101985 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || || | |||||| ||||| |||||||| Sbjct 25101986 CTCAAGGGTGATGGTCTTGCCTGTAAGAGTCTTGACGAAGATCTGCAT 25102033 >seq49 Length=14824766 Score = 114 bits (126), Expect = 3e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || |||||||||||||||| || ||||| || || || || || || || |||||| Sbjct 11086286 TCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCGTCTTCCAGCTGCTTGCCTGCAAAG 11086227 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||| | || ||||| || || || || || || |||||||| || || || | Sbjct 11086226 ATCAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTATCCTGGATCTTGGCCTTGACATTT 11086167 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| ||||| | ||| || || || ||||| ||||| || |||| ||||| ||| Sbjct 11086166 TCGATGGTGTCGCTGGGTTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACG 11086107 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 11086106 AAGATCTGCAT 11086096 >seq24 Length=26830293 Score = 114 bits (126), Expect = 3e-20 Identities = 163/228 (71%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||| | |||||| || ||||| || | ||| || || |||||||||||||||| Sbjct 11934370 ACCACTCCTCAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 11934311 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||| ||||||| || || || || || |||||||||| | || || || || Sbjct 11934310 CAGGGTGTGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGTTCGGGAGG 11934251 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || ||||| || |||||||| || || || | ||||| || || | || || Sbjct 11934250 GATGCCTTCCTTATCCTGGATCTTGGCCTTGACATTCTCGAT-GTTTCATTGGGCTCCAC 11934192 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || |||| ||||| || || |||||||| Sbjct 11934191 CTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 11934144 >seq58 Length=12492363 Score = 113 bits (124), Expect = 9e-20 Identities = 124/165 (75%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 282875 ACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAG 282934 ||| |||||||| || ||||| || || ||| || || |||||||||||||||| || Sbjct 9398030 ACCGCGCAGGCGCAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCAGACAG 9398089 Query 282935 CGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAAT 282994 ||||||||||| || |||| || || |||||||||| | || ||||| || || Sbjct 9398090 GGTGCGGCCATCTTCCAGTTCCTTGCCTGCAAAGATCAGCCTCTGCTGGTCGGGAGGGAT 9398149 Query 282995 ACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTC 283039 || ||||| || |||||||| || || || | ||||| ||||| Sbjct 9398150 GCCTTCCTTATCCTGGATCTTGGCCTTGACATTCTCGATGGTGTC 9398194 >seq40 Length=19049039 Score = 100 bits (110), Expect = 6e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | || || || ||||| || | ||| || || |||||||||||||||| Sbjct 15841345 CCACCCCTAAGACGGAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 15841286 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||| || || || || || || |||||||||| | || ||||| || Sbjct 15841285 AGGGTGCGGTTGTCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCGGGAGGG 15841226 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||| || |||||||| || || || | ||||| ||||| | ||||| Sbjct 15841225 ATGCCTTCCTTATCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGACC 15841166 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || || ||||| ||||| || || | ||||| || || Sbjct 15841165 TCCAGGGTGATGGTCTTGCCGGTTAGGGTCTTGACAAA 15841128 >seq3 Length=63406555 Score = 100 bits (110), Expect = 6e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 ||||| |||||||||||| ||| || || ||| || | || || | || |||||| Sbjct 63015619 TCTTTCTGGATGTTGTAGACAGACAGGGTACGGTTGTCTCCCAGCTGCCTGCCTGCAAAG 63015678 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | || |||||| || || || ||||| || |||||||| || || || | Sbjct 63015679 ATCAACCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCCTGGATCTTCGCCTTGACATTC 63015738 Query 283029 TCGATAGTGTC-CGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| | |||| ||| || | ||| | ||||| || ||||| ||||| || Sbjct 63015739 TCTATGGTGTCGCTGGGCTT-GACCTCCGGGGTGGTGGTCTTGCCGGTCAAGGTCTTCAC 63015797 Query 283088 GAATATCTGCAT 283099 ||| |||||||| Sbjct 63015798 GAAGATCTGCAT 63015809 >seq15 Length=37907650 Score = 98.7 bits (108), Expect = 2e-15 Identities = 57/59 (97%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct 32578790 TTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCGA 32578848 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 30212517 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 30212575 >seq26 Length=25362064 Score = 95.1 bits (104), Expect = 3e-14 Identities = 124/169 (73%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 ||| || | || ||| || ||||| || | ||| | || |||||||||||||||| Sbjct 23898039 ACCTCCCCTCAAGCGCAGGACCAGGTGCAGGGTGGACTTCTTCTGGATGTTGTAGTCAGA 23897980 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| ||| ||||||| || || || || ||||||||||||| | || |||||| | Sbjct 23897979 CAAG-GTGTGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAG 23897921 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTC 283039 | | || ||||| ||||||||| | || || || | ||||| ||||| Sbjct 23897920 GGCTGCCTTCCTTATCTTGGATCATGGCCTTGACATTCTCGATGGTGTC 23897872 >seq7 Length=48563517 Score = 95.1 bits (104), Expect = 3e-14 Identities = 153/217 (71%), Gaps = 5/217 (2%) Strand=Plus/Plus Query 282888 AGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCC 282947 || ||||| || | ||| |||| |||||||||||||| || |||| |||||| Sbjct 22654810 AGCACCAGGTGCAGTGTGGACTCTTCCTGGATGTTGTAGTCCCACAGAGTGCCACCATCC 22654869 Query 282948 TCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA--ATACCCTCCTTGT 283005 || || | || ||||||||||| | | | || ||| || ||| || ||||| |||| Sbjct 22654870 TCCAGAGGCTTGCCGGCAAAGATAAGATGCTGCTGG--ACTGGGAGGATGCCCTCTTTGT 22654927 Query 283006 CTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCG 283065 | ||| |||| || || || | || | ||| | || || || ||||| ||||| | Sbjct 22654928 CCTGGGTCTTCGCCTTGACATTTTCAGTGGTGGCACTAGACTCCACCTCGAG-GTGATGG 22654986 Query 283066 TCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||| ||| ||| |||||| || || |||| |||||| Sbjct 22654987 TCTAGCCCATCAGAGTCTTCACAAAGATCTACATTTT 22655023 >seq84 Length=5970396 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 3470951 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 3470893 >seq72 Length=8522026 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 5939329 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 5939387 >seq37 Length=20254952 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 11535272 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 11535214 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 11546520 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 11546462 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 11561647 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 11561589 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 11674541 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 11674599 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 11680130 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 11680188 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 11705763 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 11705821 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 11727611 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 11727669 Score = 84.2 bits (92), Expect = 5e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 || |||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 11564849 TTGGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 11564791 >seq30 Length=25365230 Score = 89.7 bits (98), Expect = 1e-12 Identities = 159/232 (69%), Gaps = 15/232 (6%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| |||||||| || ||||| || | |||| ||| | |||||||| | Sbjct 16538354 CCACCCCGCAGGCGGAGCACCAGGTGCAGCGTGGACTCTCTCTGGATGTT---------A 16538404 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| ||||||| | || || |||||||||||| ||| || ||||| || Sbjct 16538405 AG--TGCGGTCATCCTCCAACTGCTTGTCGGCAAAGATCAGACGCTGCTGGTCCGGGGGG 16538462 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTT----TACGGTATCGATAGTGTCCGAAGCTTC 283048 || ||||| | ||| |||||||| || || ||| | | || ||||| | || Sbjct 16538463 ATGCCCTCTTCGTCCTGGATCTTCGCCTTGAAAAACGTTTTTGAAGGTGTCGCTGGGCTC 16538522 Query 283049 GACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || || || || || || || || |||| ||||| | ||| ||||||||| Sbjct 16538523 CACCTCAAGCGTAATGGTGTTGCCTGTCAGGGTCTTCATGAAGATCTGCATT 16538574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046599440363334