Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octodon_20degus_20[refseq_20GCF_5F000260255.1_202012-05-01] 7,135 sequences; 2,995,889,303 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq74 417 1e-111 seq82 232 8e-56 seq107 226 3e-54 seq109 217 2e-51 seq126 205 1e-47 seq75 201 1e-46 seq131 150 2e-31 seq3487 105 8e-18 >seq74 Length=13126430 Score = 417 bits (462), Expect = 1e-111 Identities = 581/810 (72%), Gaps = 8/810 (1%) Strand=Plus/Plus Query 145537 TAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCC 145596 || || ||||||||| | |||| | |||||| | ||| || |||||| ||||| Sbjct 9227779 TACACAGCCATCTCCTTCTTAATGGAGGGGTGGGGATTGTACCCTTCCAGCTGGAAGTCT 9227838 Query 145597 TCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCT-GGGAAAGGG 145655 || || |||||||||| || ||| || | ||||| ||||| | |||||||| Sbjct 9227839 TCAGCTGTGAAGTCATCGATTGTCTCAACTTTTCGAAGGATTTTGAGCTTTGGGAAAGGC 9227898 Query 145656 CCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGC 145715 | || ||| | | ||||| |||||| |||| | ||| || ||||||| || || Sbjct 9227899 CTTGGTTCTCGTTGA-AGCTGAGTCTTCAGCGGCTTGATGTGATTCAGGTAGATATGTGC 9227957 Query 145716 GTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTA 145775 ||| |||| ||| | |||||| || |||| ||||| |||| ||| ||||||||||| Sbjct 9227958 GTCTCCCAAAGTGTGCACGAAGTCTCCTGGCTTCAGGCCTGTGACGTGCGCGACCATGTA 9228017 Query 145776 GGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCG 145835 ||| ||||| | | ||||||| ||||||||||| || ||||| ||||||||||| || || Sbjct 9228018 GGTGAGCAGCGCGCAGCTGGCGATGTTGAAGGGTACGCCCAGGCCCATGTCCCCTGACCG 9228077 Query 145836 CTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCA 145895 |||||||||||||||||| ||||||||| | |||||||||||||||||||| |||||| Sbjct 9228078 CTGGTACAGCTGGCAGGACAGCTCCCCGTTCACCACGTAGAACTGGCACAGGGTGTGGCA 9228137 Query 145896 GGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCT 145955 ||| ||||| ||||| || || || ||||||||||| | || || ||| || Sbjct 9228138 GGGAGGCAGCGCCATCAGAGGGAGATCTTTTGGGTTCCAGGCACACATGATGATCCTTCT 9228197 Query 145956 GCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCC 146015 | | |||| | ||||| |||| || | |||||||| || || || || Sbjct 9228198 GTCGTTAGGGTCGGTTTTGATGGTGTTGATCACGTTCTGCAGCTGGTCAACTCCTTGACC 9228257 Query 146016 CCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTA 146075 | |||||||| | | || ||| | |||||||| |||||||||||||| || || Sbjct 9228258 CGAGTAATCTGAGTCCGTATCTTTGTAGTCTGCCCCGAAATGCCTCCACTGGAAGCCATA 9228317 Query 146076 GACGGGCCCCAGGTCCCCGGGCTCCCTGTGCC---CCAGCCCGGCCCGGGCGAGGAAGTC 146132 |||||| ||||||||||| || || | | | ||| | | | ||||| || Sbjct 9228318 GACGGGGCCCAGGTCCCC---TTCTTTGCGGCTAGAAAACCCCAGGCTGTCCAGGAAATC 9228374 Query 146133 CCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGT 146192 ||||||||| ||||| ||||||||||| || || | | || ||||| |||| | || Sbjct 9228375 CCGGGACCCATTGGCATCCCAGATCTTCACTCCTTTGGATGACAGCTCCTTGGCATTTGT 9228434 Query 146193 GGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGT 146252 || ||| |||| ||||| ||||||||||| || | ||| ||||||| || | |||||| Sbjct 9228435 AGATCCCTTGATAAACCACAGCAGCTCTTCCAGAATACCCTTCCAGAATACACGCTTGGT 9228494 Query 146253 GGTCAGCAGGGGGAACTGGCCCCGCAGGGAGTACTTGGCCTGGTCCCCGAAGACGGACAG 146312 |||||||||||| || | | |||||| ||| ||||| ||||| | ||||| Sbjct 9228495 GGTCAGCAGGGGAAATTCATCTCGCAGGCTGTAGCGCGCCTGCATGCCGAACAGCGACAG 9228554 Query 146313 GGTGCCCACGCCCGTCCTGTCCCCCCTGCG 146342 ||||| |||| | | ||| || |||| Sbjct 9228555 CGTGCCAGTGCCCATGCGGTCGTCCTTGCG 9228584 >seq82 Length=12555031 Score = 232 bits (256), Expect = 8e-56 Identities = 509/761 (67%), Gaps = 10/761 (1%) Strand=Plus/Plus Query 145558 ATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCTGAAGTCATCTATG 145617 ||||| | |||||| | || || ||||| || | || | |||||||||| || Sbjct 10556077 ATGGCGGGGTGGGGATCATACCCTTCCAGTTGGAAACCTTCAACTGTGAAGTCATCGATT 10556136 Query 145618 TCCTCCACCCGCCTCAGGATCCTGAGCCT-GGGAAAGGGCCGGGGGCTCCTGGTCAGCTG 145676 | ||| || | ||||| ||||| | |||||||| | | ||| | | | ||| Sbjct 10556137 TTCTCAACTTTTCAAAGGATTTTGAGCTTTGGGAAAGGCCTCAGTTCTCATTGA-ATCTG 10556195 Query 145677 GAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAA 145736 | ||||| |||| | ||| || | ||||| || ||||| ||| || | || Sbjct 10556196 GGTTTTCAGCAGCTCAATGTGATTCAAGTAGATATGTGCGTCTGCCAATGTATGCACCAA 10556255 Query 145737 GTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGC 145796 ||| || | || | ||||| || ||| | |||||||||| ||||| ||||||||| Sbjct 10556256 GTCACCTGCCTTCAAGCCCGCGATGTGCGTGACCATGTAGTGGAGCAGCCCGTAGCTGGC 10556315 Query 145797 TATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAG 145856 |||||||||||||| ||||| |||| || | | || |||||||| ||||| | Sbjct 10556316 GATGTTGAAGGGCACACCCAGGCCCACGTTCTCTGACCGCTGGTATAGCTG--------G 10556367 Query 145857 CTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGG 145916 |||| || | |||||||||||||||||||| ||||||||| ||||||||||| || Sbjct 10556368 CTCCTCGTTCACCACGTAGAACTGGCACAGGGCGTGGCAGGGAGGCAGGGCCATCAGAGG 10556427 Query 145917 CAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGAT 145976 || || | ||||||||||| | || || || ||| | || ||||| |||| Sbjct 10556428 GAGATCTGTTGGGTTCCAGGCACACATGATGATACTTCTGTTGTCAGGGTTAACTTTGAC 10556487 Query 145977 CTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTC 146036 ||| | | ||||||| || || || || |||||||| | || Sbjct 10556488 GGTGTTGATCGCATTCTGCAGCTGGTTAACTCCTTGACCTAAGTAATCTGAGTCCATATC 10556547 Query 146037 CACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGG 146096 ||| | || | || | || ||||||||| | ||||| || ||||||||||| | Sbjct 10556548 TTTGTAGTCAGCACAAAAATACCACCACTGGAAGTCATAGACAGGGCCCAGGTCCCCTGC 10556607 Query 146097 CTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGAT 146156 || || | ||| | | | |||| ||| ||||||| ||||| |||||||| Sbjct 10556608 CTGGTGGTTAGAAAACCCCAGGCAGTCTGGGAAATCCTGGGACCCATTGGCATCCCAGAT 10556667 Query 146157 CTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAG 146216 ||| || ||| | | | ||||| |||| | || ||| |||| ||||| ||||| Sbjct 10556668 CTTCACTCCCTTGGATGGCAGCTCTTTGGCACTTATAGATCCCTTGATAAACCACAGCAG 10556727 Query 146217 CTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAACTGGCCCCG 146276 ||| || |||| ||| ||||||| || | ||||| ||||||||||| || | | || Sbjct 10556728 CTCCTCCAGGATACCCTTCCAGAACACACGTTTGGTTGTCAGCAGGGGAAATTCAACTCG 10556787 Query 146277 CAGGGAGTACTTGGCCTGGTCCCCGAAGACGGACAGGGTGC 146317 |||| ||| ||||| ||||| | ||||| |||| Sbjct 10556788 CAGGCTGTAGCGCGCCTGCATGCCGAACCCCGACAGTGTGC 10556828 >seq107 Length=10030941 Score = 226 bits (250), Expect = 3e-54 Identities = 360/518 (69%), Gaps = 34/518 (7%) Strand=Plus/Minus Query 145762 TGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCC 145821 || ||||||| |||||| ||||| | ||||||| | |||||||||||||| ||||| ||| Sbjct 3003290 TGCGCGACCAAGTAGGTGAGCAGCGCGTAGCTGACGATGTTGAAGGGCACTCCCAGGCCC 3003231 Query 145822 ATGTCCCCCGAGCGC--TGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACT 145879 || ||||| || | | |||||| |||||||||| |||||||| | ||||||| |||| Sbjct 3003230 ATATCCCCTGACCACTGTGGTACGGCTGGCAGGACAGCTCCCCATTCACCACGTAAAACT 3003171 Query 145880 GGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGG 145939 ||||||| ||||||||| ||||| ||||| || || || | |||| ||||| Sbjct 3003170 AGCACAGGGTGTGGCAGGGAGGCAGAGCCATCAGAGGGAGATCTTTCAGGTTTCAGGCAC 3003111 Query 145940 TGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCT 145999 | || || ||| ||| || ||||| | ||||| |||| || | |||| Sbjct 3003110 ACATGATGATCCTTCTGTCATCAGGGTTGGTTTTGATGGTGTTGATCACGTTCTGCAGCT 3003051 Query 146000 GGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCA------CGTACGCGGCCCCGA 146053 |||| | || || || ||||||| ||||||| |||| | |||| || Sbjct 3003050 GGTCATCTCCTTGACCTGAGTAATCT------GAGTCCATACCTTCGTAGTCAGCCCTGA 3002997 Query 146054 AGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCC 146113 | |||||||||||||| || ||||||| ||||||||||| || |||| | || Sbjct 3002996 AATGCCTCCACTGGAAGCCACAGACGGGGCCCAGGTCCCC---CTTCCTGGTGGCTAGAA 3002940 Query 146114 CGGCCCGGG----CGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTC 146169 ||| || | ||||| ||||||||||| ||||| ||||||||||| || || | Sbjct 3002939 AACCCCAGGCTATCCAGGAAATCCCGGGACCCATTGGCATCCCAGATCTTCACTCCTTTG 3002880 Query 146170 GCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACC 146229 | || ||||| |||| | | | ||| |||| ||||| ||||| | Sbjct 3002879 GATGACAGCTCCTTGGCATTTGCATATCCCTTGATAAACCACAGCAGTT----------- 3002831 Query 146230 CCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAA 146267 ||||||||| || ||||||||| |||| ||| || Sbjct 3002830 --CCTCCAGAACACATGCTTGGTGGTTAGCAAGGGAAA 3002795 >seq109 Length=10228628 Score = 217 bits (240), Expect = 2e-51 Identities = 437/639 (68%), Gaps = 18/639 (3%) Strand=Plus/Plus Query 145633 AGGATCCTGAGCCT-GGGAAAGGGCCGGGGGCTC-CTGGTCAGCTGGAGCTTCAGGGGCT 145690 ||||| ||||| | |||||||| | || ||| ||| ||||| ||||| ||| Sbjct 4836418 AGGATTTTGAGCTTTGGGAAAGGCCTTGGTTCTCGCTGA--AGCTGAGTTTTCAGCTGCT 4836475 Query 145691 CCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGA 145750 | ||| || ||||||| | || || | || || | ||||| || |||| | Sbjct 4836476 CAGTGTGATTTAGGTAGATAGGTGCATCTCTCAAAGTATGCACAAAGTCACCTGGCTTCA 4836535 Query 145751 GGCCC-GTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 ||||| | || ||| ||||| | |||||| ||| | |||||||| | | || ||||| Sbjct 4836536 GGCCCCGCGACGTGCGCGACAA-GTAGGTGAGCCCCGCGTAGCTGGTGAGGCTGCAGGGC 4836594 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || ||||| ||||||||||| || ||||| |||||||||||||| ||||||| | || Sbjct 4836595 ACGCCCAGGCCCATGTCCCCTGACCGCTGCTACAGCTGGCAGGACAGCTCCCTATTCACC 4836654 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGG 145929 ||| || || ||||||||| ||||| |||| || || || |||| Sbjct 4836655 ----AGAGCT------GGGTGTGGCAGGGAGGCAGCGCCACCAGAGGGAGATCTTTCGGG 4836704 Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGG 145989 ||||||| | | || || ||| || || ||||| | |||| | |||| | Sbjct 4836705 TTCCAGGAGTACATGATGATCCTTCTATCATCAGGGTTGGTTTTGACAGCGTTGATCATG 4836764 Query 145990 TCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCC 146049 | | |||||| | || || || ||| || |||||| | ||| ||| | ||| Sbjct 4836765 TTCTGCAGCTGGCCTACTCCTTGACCCGGGCAATCTGAGTCCATGTCTTTGTAGTCAGCC 4836824 Query 146050 CCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTG-TGCCC 146108 ||||| |||||||| |||| || |||||||| ||||||| ||| || ||| | Sbjct 4836825 CCGAAATGCCTCCAGGGGAAGCCATAGACGGGGCCCAGGTGCCCCTCCTGGCTGCTAGAA 4836884 Query 146109 CAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCT 146168 || ||| | | | | ||||| ||| ||||||| |||| ||||||||||| || || | Sbjct 4836885 CACCCCAG-GCTGTCCAGGAAACCCCAGGACCCGCTGGCATCCCAGATCTTCACTCCTTT 4836943 Query 146169 CGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGAC 146228 | || ||||| ||| | || || || |||| ||||| || |||| || ||||| Sbjct 4836944 GGATGACAGCTCTTTGACATTAGTAGATACCTTGATAAACCACAGTGGCTCGTCCAGGAC 4837003 Query 146229 CCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAA 146267 ||| ||||||| || | |||||| ||||||||||| || Sbjct 4837004 ACCCTTCCAGAACACACACTTGGTTGTCAGCAGGGGAAA 4837042 >seq126 Length=8042663 Score = 205 bits (226), Expect = 1e-47 Identities = 542/815 (67%), Gaps = 12/815 (1%) Strand=Plus/Plus Query 9544 TACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTTG 9603 |||| || | || || | | || ||||| | ||| | ||| |||| || |||||| || Sbjct 4279619 TACAGGAGGCTCGGAATCATGACCAACATCTACCTGCTCAACCTGGCCATTTCTGACCTG 4279678 Query 9604 CTATTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTATCATGATTGGACT 9663 || | || || || |||| || ||||| ||| ||| || | || | ||| Sbjct 4279679 CTCCTCCTCTTCACGCTGCCCTTCTGGATTTCCTACCTTGCG-TGGA--ATAAGTGGGTG 4279735 Query 9664 TTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAG 9723 ||||| | | ||||||| || || || ||| | |||| ||||||| || Sbjct 4279736 TTTGGCCATCTCATGTGTAAGCTCCTGTCTGGCCTGTACTGCATGGGTTTGTACAGTGAG 4279795 Query 9724 GTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACT 9783 |||| | |||||||||||| || | |||||||| || || | || | ||||| | Sbjct 4279796 ATCTTCTTCATCATCCTGCTGACCATCGACAGGTACCTGGCCATCGTTCACGCTGTGTTT 4279855 Query 9784 GCTTTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTG 9843 ||| || | | || || || | ||| | | ||| |||| |||||| |||| Sbjct 4279856 GCTCTGCGAGCCCGGACTGTGACTTTTGGTGTCATAACCAGTGTCATCACCTGGGGTCTG 4279915 Query 9844 GCAGGGTT-GTTGTCCCTCCCTGAATTTTTCTTTCATGGACACCAAGATGACAATGGTAG 9902 || ||| | | || |||| ||||| | |||| ||||| ||| | || | | || Sbjct 4279916 GCGGGGCTCGCTG-CCCTTCCTGAGCTCATCTTCCATGGGACCCACGGGCACT-TCGAAG 4279973 Query 9903 GGTTCAG-TGTGATCCTTACTACCCAGA-GATGTCTACAAATGTTTGGAGGCGCGCCCAC 9960 | || || ||| | |||||| | |||| | | | |||| ||| ||| Sbjct 4279974 AACTTAGCTGCGATGTTGTCTACCCGCATGATGAAGA-AGACCACTGGAAGCGTTTCCAA 4280032 Query 9961 GTTGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTAC 10020 | | | | ||| || || | ||||| | |||||| | | |||| | |||||||| Sbjct 4280033 GCTCTCAGGATGAACATCTTCGGCCTCATGCTCCCTCTGGTTCTCATGGTTTTCTGCTAC 4280092 Query 10021 TATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGG 10080 | ||| || |||| ||| | || | |||| || |||||||||||||||||| || Sbjct 4280093 ACGGGAATCATTAGAACCCTGCTTAGATGTCCCAATAAAAAGAAGTACAAGGCCATCCGG 4280152 Query 10081 CTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTC 10140 ||||| |||||||||||||||| || || |||| |||||||| |||||| | ||||| Sbjct 4280153 CTCATTTTTGTCATCATGGTGGTCTTCTTCATTTTCTGGACACCTTACAACCTGGTTCTT 4280212 Query 10141 CTACTGTCTACCTTTCACGCAACCCTTCTTAACCTGCAGTGTGCATTGAGCAGTAACTTG 10200 || | ||| ||||| | | | |||||| | | |||| ||||| | || Sbjct 4280213 CTTTTCTCTGCCTTTGAAGTGA-GCTTCTTGGAC--AACTGTGAGGGGAGCAAACAGCTG 4280269 Query 10201 GACATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTG 10260 ||| |||| |||| | | ||| | | ||| |||| ||||| ||| ||||||| | Sbjct 4280270 GACCTGGCCCTGCAGGTGACAGAGGTGATCGCCCACACCCACTGCTGCGTCAACCCCATC 4280329 Query 10261 ATCTACGCGTTCGTGGGGGAGAAGTTTAGAAGACACCTGTACCACTTCTTCCACACCTAC 10320 |||||||| |||||||| |||| ||| | | ||||| |||||||||||||| | Sbjct 4280330 ATCTACGCCTTCGTGGGCGAGAGGTTCCGGAAGTACCTGCGCCACTTCTTCCACAGGCAT 4280389 Query 10321 GTGGCCATCTACCTCTGCAAGTACATCCCCTTCCT 10355 ||||| |||| | |||||||| |||||||||| Sbjct 4280390 GTGGCGGCCTACTTGAGCAAGTACCTCCCCTTCCT 4280424 Score = 205 bits (226), Expect = 1e-47 Identities = 542/815 (67%), Gaps = 12/815 (1%) Strand=Plus/Plus Query 176430 TACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTTG 176489 |||| || | || || | | || ||||| | ||| | ||| |||| || |||||| || Sbjct 4279619 TACAGGAGGCTCGGAATCATGACCAACATCTACCTGCTCAACCTGGCCATTTCTGACCTG 4279678 Query 176490 CTATTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTATCATGATTGGACT 176549 || | || || || |||| || ||||| ||| ||| || | || | ||| Sbjct 4279679 CTCCTCCTCTTCACGCTGCCCTTCTGGATTTCCTACCTTGCG-TGGA--ATAAGTGGGTG 4279735 Query 176550 TTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAG 176609 ||||| | | ||||||| || || || ||| | |||| ||||||| || Sbjct 4279736 TTTGGCCATCTCATGTGTAAGCTCCTGTCTGGCCTGTACTGCATGGGTTTGTACAGTGAG 4279795 Query 176610 GTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACT 176669 |||| | |||||||||||| || | |||||||| || || | || | ||||| | Sbjct 4279796 ATCTTCTTCATCATCCTGCTGACCATCGACAGGTACCTGGCCATCGTTCACGCTGTGTTT 4279855 Query 176670 GCTTTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTG 176729 ||| || | | || || || | ||| | | ||| |||| |||||| |||| Sbjct 4279856 GCTCTGCGAGCCCGGACTGTGACTTTTGGTGTCATAACCAGTGTCATCACCTGGGGTCTG 4279915 Query 176730 GCAGGGTT-GTTGTCCCTCCCTGAATTTTTCTTTCATGGACACCAAGATGACAATGGTAG 176788 || ||| | | || |||| ||||| | |||| ||||| ||| | || | | || Sbjct 4279916 GCGGGGCTCGCTG-CCCTTCCTGAGCTCATCTTCCATGGGACCCACGGGCACT-TCGAAG 4279973 Query 176789 GGTTCAG-TGTGATCCTTACTACCCAGA-GATGTCTACAAATGTTTGGAGGCGCGCCCAC 176846 | || || ||| | |||||| | |||| | | | |||| ||| ||| Sbjct 4279974 AACTTAGCTGCGATGTTGTCTACCCGCATGATGAAGA-AGACCACTGGAAGCGTTTCCAA 4280032 Query 176847 GTTGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTAC 176906 | | | | ||| || || | ||||| | |||||| | | |||| | |||||||| Sbjct 4280033 GCTCTCAGGATGAACATCTTCGGCCTCATGCTCCCTCTGGTTCTCATGGTTTTCTGCTAC 4280092 Query 176907 TATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGG 176966 | ||| || |||| ||| | || | |||| || |||||||||||||||||| || Sbjct 4280093 ACGGGAATCATTAGAACCCTGCTTAGATGTCCCAATAAAAAGAAGTACAAGGCCATCCGG 4280152 Query 176967 CTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTC 177026 ||||| |||||||||||||||| || || |||| |||||||| |||||| | ||||| Sbjct 4280153 CTCATTTTTGTCATCATGGTGGTCTTCTTCATTTTCTGGACACCTTACAACCTGGTTCTT 4280212 Query 177027 CTACTGTCTACCTTTCACGCAACCCTTCTTAACCTGCAGTGTGCATTGAGCAGTAACTTG 177086 || | ||| ||||| | | | |||||| | | |||| ||||| | || Sbjct 4280213 CTTTTCTCTGCCTTTGAAGTGA-GCTTCTTGGAC--AACTGTGAGGGGAGCAAACAGCTG 4280269 Query 177087 GACATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTG 177146 ||| |||| |||| | | ||| | | ||| |||| ||||| ||| ||||||| | Sbjct 4280270 GACCTGGCCCTGCAGGTGACAGAGGTGATCGCCCACACCCACTGCTGCGTCAACCCCATC 4280329 Query 177147 ATCTACGCGTTCGTGGGGGAGAAGTTTAGAAGACACCTGTACCACTTCTTCCACACCTAC 177206 |||||||| |||||||| |||| ||| | | ||||| |||||||||||||| | Sbjct 4280330 ATCTACGCCTTCGTGGGCGAGAGGTTCCGGAAGTACCTGCGCCACTTCTTCCACAGGCAT 4280389 Query 177207 GTGGCCATCTACCTCTGCAAGTACATCCCCTTCCT 177241 ||||| |||| | |||||||| |||||||||| Sbjct 4280390 GTGGCGGCCTACTTGAGCAAGTACCTCCCCTTCCT 4280424 >seq75 Length=11870250 Score = 201 bits (222), Expect = 1e-46 Identities = 141/161 (88%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 |||||||||| ||| |||||||||||||| ||||| | |||||||| |||||||||||| Sbjct 4085023 AGGCCCGTGACGTGCGCGACCATGTAGGTGAGCAGCGCATAGCTGGCGATGTTGAAGGGC 4084964 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || ||||| ||||||||||| || |||||||||||||||||||| |||||||| | || Sbjct 4084963 ACGCCCAGGCCCATGTCCCCTGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATTCACC 4084904 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 |||||||||||||||||| ||||||||| ||||| ||||| Sbjct 4084903 ACGTAGAACTGGCACAGGGCGTGGCAGGGAGGCAGCGCCAT 4084863 >seq131 Length=8239869 Score = 150 bits (166), Expect = 2e-31 Identities = 128/157 (82%), Gaps = 3/157 (2%) Strand=Plus/Plus Query 138082 CAGCGCCTCAGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATCC 138141 ||||| ||||||| | ||||||||| || ||||| |||||||| |||||||| | ||| Sbjct 2014284 CAGCGTCTCAGCCGAAGCCTGAGGGTCTTCAGCTTCTCCCCCAGAGAGTTCACATGCTCC 2014343 Query 138142 TTTTCCTGGTCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAACTGG 138201 || ||| | | ||||||||| |||| |||||||||||| |||||||||||||| Sbjct 2014344 TTGAT---GTCTGGGTCGTGGTTCTCTGCCTTGGGCATCACCTCTACCAGGTAAAACTGG 2014400 Query 138202 ATCATCTCAGACAGGGCCTGGCAGCCCAGGTAACCCT 138238 |||||||| |||| ||| ||||| ||||||||||||| Sbjct 2014401 ATCATCTCTGACAAGGCTTGGCAACCCAGGTAACCCT 2014437 Score = 105 bits (116), Expect = 8e-18 Identities = 69/76 (91%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 137941 GTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACTCGCTCATGGCCTTGTAGACC 138000 ||||||||||| ||||| ||||| ||||||||||||||||| |||||||| |||||||| Sbjct 2012160 GTCATGTAGGCTTCTATATAGTTGATGAAGATGTCAAACTCACTCATGGCTTTGTAGACA 2012219 Query 138001 CCTTTTTCCTGGAGCT 138016 |||||||| ||||||| Sbjct 2012220 CCTTTTTCTTGGAGCT 2012235 >seq3487 Length=3565 Score = 105 bits (116), Expect = 8e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 146125 AGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTG 146184 ||||| ||||||||||| |||| ||||||||||| || || | | ||| | ||| ||| Sbjct 1448 AGGAAATCCCGGGACCCACTGGCTTCCCAGATCTTCACTCCTTTGGAGGACAACTCTTTG 1389 Query 146185 GAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACC 146244 | | || || ||| |||| ||||| |||||||| || || || ||| |||||| || Sbjct 1388 GCATTTGTAGATCCCTTGATAAACCACAGCAGCTCCTCCAGAACACCCTTCCAGAGCACA 1329 Query 146245 CTCTTGGTGGTCAGCAGGGGGAA 146267 | || ||| ||||||||||| || Sbjct 1328 CGCTAGGTCGTCAGCAGGGGAAA 1306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590024172525400