Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octodon_20degus_20[refseq_20GCF_5F000260255.1_202012-05-01] 7,135 sequences; 2,995,889,303 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq288 443 3e-119 seq187 232 8e-56 seq206 187 3e-42 seq64 127 3e-24 seq146 120 4e-22 seq151 105 8e-18 seq6919 82.4 1e-10 >seq288 Length=2168581 Score = 443 bits (490), Expect = 3e-119 Identities = 940/1394 (67%), Gaps = 18/1394 (1%) Strand=Plus/Plus Query 62622 CCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCA 62681 ||| |||| | |||||||| || || || ||||| | ||| || || || | || Sbjct 510321 CCTTCATAGATTTCATATGGGCCAAGCTCCTTGGCTAGCTCACAGCTGGCTTCCAGGGCT 510380 Query 62682 CCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAAT 62741 || |||||||| ||||||| ||| | ||||||| || || || || ||||| Sbjct 510381 CCATAATAAATAGTTTCAAGGATTTATTTATTTAATAACTGGGCCTCTATACTCTCAAAA 510440 Query 62742 GGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTA 62801 ||||| | | || ||||| | || | | ||||| || ||||| || || |||||| Sbjct 510441 GGATATCTCATCAGGATAAAGGTATCTACCAGCCCTTGTACTCCAATTCCAATGGGTCTA 510500 Query 62802 TGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTA 62861 || | ||||| || | | || ||||| | |||||| | | ||||| ||||||||| Sbjct 510501 TGGCATTTATTTGATAAATGTGCCTCTGGGACAGGATAGT---TTATATCGATAATTTTA 510557 Query 62862 TTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCA 62921 || | ||||| |||||| ||||| || || || ||| ||| || || Sbjct 510558 TTCAAATTTCGGACAATAGCTTTGGTGACTTCTGCCAATTTCTCAAAGTCGTATGTGTGT 510617 Query 62922 TCTATT---ACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTA 62978 ||| | ||| |||| |||| || | || |||| ||||| || || |||||||| Sbjct 510618 TCTGGTGTAACATACATATTCAGGGCCAGGGAAGCCAAGTTACAAACTGCAACCTCATTT 510677 Query 62979 GCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTT 63038 | ||||| | ||| || ||||| || || || || ||||| ||||| | || Sbjct 510678 TTGCTGGTATATTCAACTATTTCTGTGCACAGGTTGCTGCATTTGATTGTTCCCAGGTTC 510737 Query 63039 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCA 63098 || || || ||||| ||||| | ||| || || || ||| | | ||||| | || Sbjct 510738 TGCTGGTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACAGGGTACCCGGCTCT 510797 Query 63099 ATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGATTTGT---- 63153 ||||||| || | || | | ||| | | || |||| |||| | |||| Sbjct 510798 GTCTGAGACTCAGTGATGGTGTACCAAAGCTGCT-GAGCTTTTACAAC---TTTGCGAAC 510853 Query 63154 ATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGT 63213 || |||| | |||| || ||| || || || || ||||||||||| | | Sbjct 510854 ATGACCTTGTT-TTTCATAACTTTCATATAACTTCTCAAATTCCTCTCCCCAAACCTCAT 510912 Query 63214 CCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63273 ||| | |||||| |||| ||||||| ||| ||||| || | | || ||||||| Sbjct 510913 CCAGGCCAGGACACTCATTTGGACACAGCAAAGACCAGTCCTGATTAGTCTCTACTCGTT 510972 Query 63274 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGT 63333 |||| ||||||| |||||||||| || | || |||| || | | || || || | Sbjct 510973 TCATGAAGAGATTCAGAATCCAAAGGGCAAAGAAAAGATTCCTGGCACGCTGCTCTTCTT 511032 Query 63334 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 63393 ||||||| |||||||| | ||| || ||| | | || || ||||||| || |||| || Sbjct 511033 TTCCTGTGTTCTTTTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCAAGGCTCCAGGT 511092 Query 63394 ATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 63453 | || || | | ||||| | |||||||| || ||||| | || | ||| ||||| | Sbjct 511093 AAATAGCAAATGCCCCAGGGCACTTGTTTCCACCTTGATCAACATAACGAGCTGTGTTGT 511152 Query 63454 TATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGC 63513 |||| ||||||| |||||| | || || || || | |||||||| || | || |||| Sbjct 511153 TATACACTCTCAGCATTGGTACAAGGCCATTAGAATTGCCATTGGTCCCAGCTATGTAGC 511212 Query 63514 CTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63573 ||| | || | |||| ||| | | | ||| ||||| || || |||||| || | Sbjct 511213 TGCCAGTAGCCCAAATACAACTCACAGTGACACCAATTCCTCCAGCGGATTTAGAAATCA 511272 Query 63574 ATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTA 63633 |||| || | || | |||||||| |||||||| |||| ||||| |||| | || | Sbjct 511273 ATGCACACTGCTTCAGAGTGTCATAAATGCCTTCGGTGCTGTCATCTTTCATACTCAGAA 511332 Query 63634 GAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63693 | |||||||| || | ||| | | | || | ||||| || | | |||||||| | Sbjct 511333 GGAAACAGCTTGAAAGTTGTGGGCAGTTGGTACTAGCATTGAAGAGAGAGGGAGAAGCAT 511392 Query 63694 GCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATT 63753 | |||||||| || | ||||| || ||||| || ||||| || | ||||| || || Sbjct 511393 GAGTAAACCACTTCTGGGAAAGAAGGTTGTATGTTTCAATTGCAGCCTCTATGTCTTCTT 511452 Query 63754 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGT 63813 ||||| || || | || | ||| ||||| ||||| || |||||| | | ||| | Sbjct 511453 TGTGAATCCCCACAGACACCCTCATCAACATATGCTGCGGCCTTTCAGCCACTTTTCCAT 511512 Query 63814 TTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 63873 | || |||||||| ||||| | |||| ||| ||||| ||||| || || || || || | Sbjct 511513 TGATCTTCAACAAATAGGACCTCTCCAGAGTCTTAAAGCCAAAGTAATTATAAGAGAAAT 511572 Query 63874 CTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGG 63933 ||| || || || || | ||||| || ||| |||| ||| ||||||| | Sbjct 511573 CTCAGTCATAGATGATGGCAGAATTCAGGCGATCTTTATGGGCCAAAACAATATCCAGTG 511632 Query 63934 TAATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAA 63992 | |||| | | || ||||||||||| ||||| | ||||| | ||||||||| | Sbjct 511633 T-TGACTTGGCCACCATGGGAGAATGTTTGCCATTATGTGGATTTATATAGTTGAAGAGG 511691 Query 63993 TCCTCCATCACTTC 64006 |||||||| || || Sbjct 511692 TCCTCCATTACATC 511705 Score = 149 bits (164), Expect = 8e-31 Identities = 294/430 (68%), Gaps = 9/430 (2%) Strand=Plus/Plus Query 62070 GGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGC 62129 ||| | || | || ||| ||||| || || || | | | || |||| | || || || Sbjct 508938 GGTCTTGTCCTTAAATAATACATCCCAGTCTTCAAATCCAGCTTCCAAGCATAGAAGTGT 508997 Query 62130 ATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGA 62189 |||| || || ||| || | || || || || ||||| |||| | | || || ||| Sbjct 508998 GTACTGGTGAGCTTGTG-TAGTTGGGCTCAGCAATGTGGATGTTCAAAAACTGGCTCTGA 509056 Query 62190 TCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATTTCCCAA 62249 || ||||| || || | || |||||||| || | || || || || | |||||||| Sbjct 509057 TCAATGAAAGCACCACGATCAGCAGCCATCTTCAGGACAGTTTTCTGAGAGATTTCCCAT 509116 Query 62250 ATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TAT--TCTGAATGGATC 62304 | || ||||||| | || | || || |||| ||| ||| |||| || || | Sbjct 509117 ACTGTCTTATAAAGCTGGTTCAGGTCATCGGGAA--TTTCCACTATGCTCTGGATAGAGC 509174 Query 62305 CACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAA 62364 || | |||||| ||| || || || ||||||||||| | |||||| | | Sbjct 509175 CATTGCAGGCAATAATCTGATTTTTCATTTCTTCATTCCATAAGCCCCGCTCGGTAAGAT 509234 Query 62365 CTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAA 62424 || | | || || || || || | || |||||||| || || ||||| ||||||| | Sbjct 509235 CTTTCAATAG-TGAGGATTTACAATCTGAAATTCTCCTGATAAGACTCTTAGAGTGTAGA 509293 Query 62425 TATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAG 62484 | || |||||||| ||||| | |||||||| |||| ||| || ||||||||||| |||| Sbjct 509294 TGTTGCTGGTATAAGGTTCAATAGACTCATTTTTTCTCAAGATCTGAGCAGTTGAAGCAG 509353 Query 62485 TCGGCATAGG 62494 | | ||| || Sbjct 509354 TAGTCATGGG 509363 >seq187 Length=5094135 Score = 232 bits (256), Expect = 8e-56 Identities = 601/913 (66%), Gaps = 25/913 (3%) Strand=Plus/Plus Query 33235 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 33291 ||||||||||| |||| ||| |||| ||| || || |||||||||||||| Sbjct 4782 TTTAAAAGTCAGCATCCCAAGTAAAAGAATTCTCCATAGGAATGGACATAACTCCCATAG 4841 Query 33292 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT- 33350 | || || ||||| || || || || || || || || |||||||| || |||||| Sbjct 4842 TCTGATACTCACCAACTATCTTCTCAAAGAAGTTTGTCTTCCCTTCCAAAGAAATATTTC 4901 Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410 || ||||| ||||| ||||| || | ||| || | || || | ||| || Sbjct 4902 TCTATGAAGTCAAATGGATTTTCCACTCGGAAAACCTTGCTGAAGCCTAGTTCCAGCATG 4961 Query 33411 AATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGT 33470 | || || || || || | || | |||||||| | | ||||| || || | Sbjct 4962 AGCCTGTCAGCCACAAACTTGATGCACTGTTTCATCAAATTGGAGTTCATCCCGATAGGC 5021 Query 33471 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATA 33530 || || || | || | || || || || || |||||| | || || | | ||| Sbjct 5022 TTCACCGGCAAGCCCTCCGTGAGGAACTCCTGCTCAATGCCGATGGCGTTGATGACAATC 5081 Query 33531 AATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAAA 33590 || || | | || ||| || | | || || ||||||| || |||| Sbjct 5082 TCCCTCACCCTCTGCTCCAACGGCTTGTGCACCAGGTGCTTGAACATCAGGCACACGAAG 5141 Query 33591 TCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATT 33650 || || ||| ||||||| ||| ||||| | |||||| ||||| ||||| || ||||| Sbjct 5142 TCACAACGCAAGCCCTCGTATCTGCTAATGAGTTCGTTGGAAAAGGTGAGGCCAGGCATG 5201 Query 33651 AGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCT 33710 ||||| || || || ||||| || || | || || || || |||||||| |||||||| Sbjct 5202 AGGCCCCGTTTCTTGAGCCAGAAGATCAACGCAAAAGAACCAGAAAAGAAAATTCCTTCC 5261 Query 33711 ACTGCAGCAAAGGCAATAA-GTCTCTCTCCATAACCGGCGC---TGTCATGTATCCACTT 33766 || | ||||||| | || | |||||||| ||| |||| |||||| Sbjct 5262 ACAGTGACAAAGGCCACCGTGTGT-TCTCCATATGTGGCCTCTTTGTCCCCTATCCAGCG 5320 Query 33767 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 33826 ||||| || |||||||| || ||||| | || || || ||||||| |||||| | Sbjct 5321 CAACGCCCAGTCTGCCTTCTTCTTCACACAGGCCACGGTCTCAGTGGCATTGAAGAGAAA 5380 Query 33827 GtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATG 33886 | |||| | |||| ||| ||||| || || | || | |||||||||||||| Sbjct 5381 CTCCCTTTCTTGGGAATCTCTAATGTAAGTGTCCATAAGGAGTGTGTACATTTCCGAATG 5440 Query 33887 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTC 33946 | |||||| ||||| ||||| || ||||||||||| | || || ||||| || ||||| Sbjct 5441 CAGGTTTTCCATGGCAATCTGGAAGCCGTAGAAACACCGGGCTTCTGTAATTTGAACTTC 5500 Query 33947 TGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAA---- 34002 | |||||| || | | ||| ||| | ||||| ||||| ||||| | ||||| Sbjct 5501 TTGGTTAAATCGCTCCACCAGATTCTCACTGACTATGCCATCGCTGGCAGGAAAAAAAAA 5560 Query 34003 -ACGCCAATACA-----------TGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTAT 34050 | |||| | ||| |||||| ||| | || || | | || | Sbjct 5561 TATAATAATAAAAAGTTAGAATGTGTGATATAAAGTATCTCTCTTCAGCCTTCAGGGCTT 5620 Query 34051 TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTG 34110 ||| | | || ||||| || | ||| ||||| ||| |||||||||| || ||||| | Sbjct 5621 CCCAGTGCTGAATGTCTTTGGAAAGATCGACTTCCTCCGCTGTCCAAAAAGAAGCCTCGG 5680 Query 34111 CCTTTTTATACAT 34123 | || ||| |||| Sbjct 5681 CTTTCTTACACAT 5693 >seq206 Length=4534510 Score = 187 bits (206), Expect = 3e-42 Identities = 716/1105 (65%), Gaps = 22/1105 (2%) Strand=Plus/Plus Query 62619 GATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAAT 62678 || ||| |||| || |||||||| || | || || ||||| | ||| || || || || Sbjct 2975816 GAGCCTTCATAGGTTTCATATGGGCCATGCTCCTTGGCTAGATCACAGCTGGCTTCCAAG 2975875 Query 62679 GCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCA 62738 || || ||||||| || ||| ||| | |||||| | || | || || || ||| Sbjct 2975876 GCTCCATAATAAACAGTCACAATGATTTGGTTATTTCAAAACTGGGACTCTGGACTCTCA 2975935 Query 62739 AATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGT 62798 || | || | | || ||||| || || | | | ||| || |||| | || || Sbjct 2975936 AAATGTTATCTCATCAGGATAAAAGCATCTGTGAGCCGTTGTACTCCAACTTCAATGGGG 2975995 Query 62799 CTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 62858 ||| ||||| || | | || |||| | ||| || || || || || |||||| Sbjct 2975996 AAATGATGTTTATTTGATAAGTGTGCCTCTGAGACAGGGTAGTATTTTATGTCAATAATT 2976055 Query 62859 TTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATC-G 62917 ||||| |||||| |||||| ||| || || ||| ||| | | ||| || | Sbjct 2976056 TTATTCAGATTTTGGACAATATCTTCCGTGACTTCTGTCAATTTCTCATAGTCATATGTG 2976115 Query 62918 CCCATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCAT- 62976 | | | ||| |||| |||| || | || |||| |||| || || ||||||| Sbjct 2976116 TTCTGATGTAACATACATATTCAGGGCCAGGGAAGCCAAGATACAAACTGCAACCTCATC 2976175 Query 62977 -TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAA 63035 | || | |||| || || || ||| || || || || ||||| ||||| | Sbjct 2976176 TTTGCTG--GTCTATTCTACCATTTCTGTGTGCAGGTTGCTGCATTTGATTGTTCCCAGG 2976233 Query 63036 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTT 63095 || | || || ||||| |||| | | || ||| || || |||||||| ||||| || Sbjct 2976234 TTCTTCTGGTTGCTCTTCCAGTTATAAGAATGCTTGTAGAGCATGAATGGGGTACCCGTC 2976293 Query 63096 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGT-A 63154 | ||||||| || || || | | ||| | | || | ||| | | | ||| | Sbjct 2976294 TG--TCTGAGACTCAATGATGACATACCA-ATG-CTGCTGAATTT-TCACAACTTTACGA 2976348 Query 63155 TCTC--CTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTG 63212 | | | || | |||| || ||| || || || || ||||||||||| | | Sbjct 2976349 ACACGACCTTGTTTTTCATAACTCTCATATAAGGTATCAAATTCCTCTCCCCAAACCTCG 2976408 Query 63213 TCCAATCTAGGACATTCATCCGGACACATCAACGACCACTC-TCCGTCATCCTTCACTCG 63271 |||| | |||||| ||| | |||||||| || || || | | || | | || Sbjct 2976409 TCCAGACCAGGACACCCATTTTG-CACATCAAAGATCAGTCCTGAATAGTCTCTGA-TCA 2976466 Query 63272 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTC 63331 |||||| |||||||| |||||||| | || | || ||||| || | ||||| | Sbjct 2976467 TTTCATGAAGAGATCCAGAATCCAAGGTGCAAAGAAAAGATCCCTAGCATGCTGTTCTCC 2976526 Query 63332 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAA 63391 ||||||||||||||| | ||| || ||| | | || || ||||| | ||||| Sbjct 2976527 CTTTCCTGTATTCTTT---AAATCAAGAAACTCAAGCATTTCTAAATGCTGAGCCTCCAA 2976583 Query 63392 GTATATGGC-CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGT 63450 | | || | || || ||| | | || ||||| | |||| | || ||| | |||| Sbjct 2976584 GGAAATAACAAATGAC-CCAAGGCACTTATTTCCACTTTGATGAACATAACTATCTGTGT 2976642 Query 63451 TATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATAT 63510 | ||||| ||||||| |||||| |||| ||| || |||| |||||||| | | || Sbjct 2976643 TGTTATACACTCTCAGCATTGGTATAAGACC-ATTAATATTCCATTGGTCCAAGCTATGC 2976701 Query 63511 AGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGA 63570 ||| || | || |||| | ||| | | | ||| ||||| || || |||||| | Sbjct 2976702 AGCTATCAGTAGCCTGAATGTAACTCACAGCAACACCAATTCCACCAGCAGATTTAGAAA 2976761 Query 63571 TTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAA 63630 | ||||| | | || | |||| || ||||||| ||||| ||||| |||| | | Sbjct 2976762 TCAATGCATACTGCTTCAGAGTGTAGTAAATGCCTTTGATGCTGTCATCTTTCATAATCA 2976821 Query 63631 GTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAG 63690 | |||||| |||| || ||||| | | | || | | ||| || | || ||||||| Sbjct 2976822 GAAGAAAAAAGCTTGAAATTTGTGGGCAGTTGGTATCAGAATTGAAGAGAGTGGGAGAAG 2976881 Query 63691 CGTGCGTAAACCATTTTTCAGAAAG 63715 | || ||||| || || | | |||| Sbjct 2976882 CATGAGTAAAGCACTTATTAAAAAG 2976906 >seq64 Length=12756018 Score = 127 bits (140), Expect = 3e-24 Identities = 218/315 (69%), Gaps = 1/315 (0%) Strand=Plus/Minus Query 33843 TCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 33902 ||| | | ||| ||||| || | | || ||||| || || |||| || || ||| Sbjct 2273454 TCTCTGATATAGGTATCTATGAGCAAGCTGTACATCTCTGAGTGAACATTCTCGATGAGG 2273395 Query 33903 ATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCT 33962 ||||| || |||||||| || | ||||| | | |||||| || | || || || Sbjct 2273394 ATCTGGAAGCCGTAGAAGCAGCGGGCCTCAGGGACCTGCACCTCCTGGCTGAAGCGCTCC 2273335 Query 33963 GCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAA-ACGCCAATACATGTTTTAT 34021 | || |||||||| || ||||||||| | |||||||||| | || || || || || Sbjct 2273334 ACCAAGTTTTCATTTACAATTCCATCATTTGCTGCAAAAAGAGGCTAAGACGTGAGAAAT 2273275 Query 34022 AAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCAC 34081 ||| ||||| || || || | || |||| ||| | | | ||| || |||| ||| || Sbjct 2273274 AAAGTATTTCTCATCCGGCTTGAGCTTATGCCAGTGAGGCAGATCCTTTGATAGATCAAC 2273215 Query 34082 TTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATA 34141 || || | ||||| || |||| || ||| || ||||| ||||||||||| | || Sbjct 2273214 CTCCTCTGCCGTCCAGAAGGATGTCTGCACCTGCTTGTACATCTTCCAGATGTCGGGGTA 2273155 Query 34142 TTGGATTGGGAAAAT 34156 ||||| ||||| || Sbjct 2273154 CTGGATGGGGAAGAT 2273140 >seq146 Length=7541600 Score = 120 bits (132), Expect = 4e-22 Identities = 107/134 (80%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447 || || |||||||| ||||| ||||| |||||||| || || |||||||| ||||| | Sbjct 3726378 ACCTGAAATTCTCCTGACAAGACTCTTCGAGTGTAGATGTTGCTGGTATAAGGTTCAATA 3726319 Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507 ||||| ||||||||||| || ||||||||||| ||||| ||||| || || | | || | Sbjct 3726318 GACTCGTTATTTCCCAAGATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAGA 3726259 Query 62508 CTATTTCTAAGACC 62521 || ||||| | ||| Sbjct 3726258 CTGTTTCTTATACC 3726245 Score = 105 bits (116), Expect = 8e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 62622 CCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCA 62681 ||| |||| || |||||||| || | || || ||||| | ||| || || || | || Sbjct 3721963 CCTTCATAGGTTTCATATGGGCCATGCTCCTTGGCTAGCTCACAGCTGGCTTCCAGGGCT 3721904 Query 62682 CCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAAT 62741 || |||||||| ||||||||||| | ||||||| || || || || || ||||| Sbjct 3721903 CCATAATAAATAGTTTCAAAGATTTGTTTATTTAATAACTGGGCCTCTGGACTCTCAAAA 3721844 Query 62742 GGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTA 62801 ||||| | | || ||||| || || || | ||||| || ||||| || || |||||| Sbjct 3721843 GGATATCTCATCAGGATAAAGGCATCTGCCAGCCCTTGTACTCCAATTCCAATGGGTCTA 3721784 Query 62802 TGTCTCTTATTAGAGATTTCAGCTTCTGGAATA 62834 || | ||||| || | | || | ||||||| Sbjct 3721783 TGGCGTTTATTTGATAAATGTGCCTTTGGAATA 3721751 Score = 93.3 bits (102), Expect = 5e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 63267 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGT 63326 ||||||||||| |||||||| ||||||||||| || | || |||||||| | | || Sbjct 3714759 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGATCTCTGGCACGCTGC 3714700 Query 63327 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 63386 || || |||||||| ||||| || | ||| || ||| | | || || ||||||| || Sbjct 3714699 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCAAGGC 3714640 Query 63387 TCCAAGTATATGGC 63400 |||| ||| || || Sbjct 3714639 TCCAGGTAAATAGC 3714626 Score = 82.4 bits (90), Expect = 1e-10 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 63507 ATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTA 63566 || |||| ||| | ||||||||| ||| | | | ||| |||||||| || ||| Sbjct 3709383 ATGTAGCTGCCAGTAGCACGAATACAACTCACAGCAACACCAATTCCCCCAGCGGATTTG 3709324 Query 63567 GAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATG 63626 || || ||||| || | || | |||||||| |||||||| ||||| ||||| |||| Sbjct 3709323 GAAATCAATGCACACTGCTTCAGAGTGTCATAAATGCCTTCGATGCTGTCATCTTTCATA 3709264 Query 63627 TTAAGTAGAAAACAGCTAGA 63646 | || || ||||||||||| Sbjct 3709263 CTCAGAAGGAAACAGCTAGA 3709244 >seq151 Length=7174217 Score = 105 bits (116), Expect = 8e-18 Identities = 96/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663 |||||||||| ||||| | |||||| ||||| ||||| || ||||| || || || || | Sbjct 1182556 CCTCGTCTCTGCTAATGAGTTCGTTGGAAAAGGTGAGGCCAGGCATGAGTCCTCGTTTCT 1182497 Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723 | ||||| || || || || || || || ||||||||||| ||||| || || ||||||| Sbjct 1182496 TGAGCCAGAAGATTGACGCAAAAGAACCAGAAAAGAAGATGCCTTCCACAGCGGCAAAGG 1182437 Query 33724 C 33724 | Sbjct 1182436 C 1182436 Score = 100 bits (110), Expect = 4e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 33842 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33901 |||||||| ||||| || || | ||||| |||||||||||||| |||||||| || || Sbjct 1180952 ATCTTTAATGTAAGTGTCAATAAGCAGACTGTACATTTCCGAATGTATGTTTTCCATAGC 1180893 Query 33902 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTC 33961 ||||| || ||||||||||| | || || ||||| || |||||| | |||||| || Sbjct 1180892 AATCTGGAAGCCGTAGAAACAACGGGCTTCTGTAATTTGAACTTCTTGGCTAAATCGCTC 1180833 >seq6919 Length=1122 Score = 82.4 bits (90), Expect = 1e-10 Identities = 102/139 (73%), Gaps = 3/139 (2%) Strand=Plus/Minus Query 33235 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 33291 |||| |||||| |||| |||| |||| ||| ||| | |||||||||||||| Sbjct 625 TTTAGAAGTCAGCATCCAAAGTAAAAGAATTCTCTGTGGGGCTGGACATAACTCCCATCC 566 Query 33292 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 33351 | || || || ||||| | || || || || || || || ||||||| || ||||| | Sbjct 565 TCTGATACTCGCCCACTCTCTTCTCAAAGAAGTTTGTCTTCCCTTCCAGAGAAATATTCT 506 Query 33352 CCATGAAATCAAACGGATT 33370 ||||||| ||||| ||||| Sbjct 505 CCATGAAGTCAAATGGATT 487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629761428142800