Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octodon_20degus_20[refseq_20GCF_5F000260255.1_202012-05-01] 7,135 sequences; 2,995,889,303 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq74 300 1e-76 seq75 158 1e-33 seq107 138 1e-27 seq82 138 1e-27 seq109 122 7e-23 seq11 91.5 1e-13 seq10 91.5 1e-13 seq125 89.7 4e-13 seq272 87.8 2e-12 seq20 87.8 2e-12 seq16 84.2 2e-11 seq126 82.4 7e-11 seq111 82.4 7e-11 >seq74 Length=13126430 Score = 300 bits (332), Expect = 1e-76 Identities = 491/700 (70%), Gaps = 7/700 (1%) Strand=Plus/Plus Query 20952 TGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCCGTGACGTGAGCGATC 21011 || ||||| ||||| |||||||| |||||||| || ||||||| |||||||| |||| | Sbjct 9227953 TGTGCGTCTCCCAAAGTGTGCACGAAGTCTCCTGGCTTCAGGCCTGTGACGTGCGCGACC 9228012 Query 21012 AGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCGGCG 21071 | || || || || ||| ||||||||||||| || || || || ||||||||||| | Sbjct 9228013 ATGTAGGTGAGCAGCGCGCAGCTGGCGATGTTGAAGGGTACGCCCAGGCCCATGTCCCCT 9228072 Query 21072 GACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAACTGACACAAAACG 21131 |||| ||||||||||||||||||||||||||| ||||||| ||||| |||| | Sbjct 9228073 GACCGCTGGTACAGCTGGCAGGACAGCTCCCCGTTCACCACGTAGAACTGGCACAGGGTG 9228132 Query 21132 TGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCGCACATAACGATG 21191 || || ||||| || |||||| | | ||| || |||||||| || ||||| | ||| Sbjct 9228133 TGGCAGGGAGGCAGCGCCATCAGAGGGAGATCTTTTGGGTTCCAGGCACACATGATGATC 9228192 Query 21192 CGCCGATCG-TGGGGCCGCCTGTTAATTAGATCCACCACGTAACGCAGCTGGTCCACCCC 21250 | | ||| | ||| || | || || | | ||||| |||||||||| || || Sbjct 9228193 CTTCTGTCGTTAGGGTCG-GTTTTGATGGTGTTGATCACGTTCTGCAGCTGGTCAACTCC 9228251 Query 21251 CTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAATGTCTCCACTGGAA 21310 |||||| ||| | | ||| | | |||| || ||||| ||||| ||||||||||| Sbjct 9228252 TTGACCCGAGTAATCTGAGTCCGTATCTTTGTAGTCTGCCCCGAAATGCCTCCACTGGAA 9228311 Query 21311 CCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTCCCCGAAGCCCTGCGCCG-CCAAAA 21369 || || || || ||||| || || || |||| | || ||| || | ||| | Sbjct 9228312 GCCATAGACGGGGCCCAGGTCCCCTTCTTTGCGG-CTAGAAAACCCCAGGCTGTCCAGGA 9228370 Query 21370 AGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACGCCGCGGCGCGACAGTTCGGTGGAGT 21429 | | |||||||| | || ||||| || || || || | ||||| || ||| | Sbjct 9228371 AATCCCGGGACCCATTGGCATCCCAGATCTTCACTCCTTTGGATGACAGCTCCTTGGCAT 9228430 Query 21430 CGGTGGAGCCCCTGATAAACCACAGCAACTCCTCCACGACGCCCCTCCAAAACACCCTTT 21489 || || ||| ||||||||||||||| ||| |||| | ||| |||| || || | | Sbjct 9228431 TTGTAGATCCCTTGATAAACCACAGCAGCTCTTCCAGAATACCCTTCCAGAATACACGCT 9228490 Query 21490 TGGTGGTTAACAGAGGAAACTCGTCCCTGAGGTTATATCGGGCCTGAAGCCCGAACACGG 21549 ||||||| | ||| ||||| || || | ||| | || || ||||| | ||||||| | Sbjct 9228491 TGGTGGTCAGCAGGGGAAATTCATCTCGCAGGCTGTAGCGCGCCTGCATGCCGAACAGCG 9228550 Query 21550 ACCTGGTGCCCACGCCCGTCCTGTCCTCCCTCTGCACGCCGTGTTTAATAATTAAATCCA 21609 || ||||| |||| | | ||| ||| | | | |||| | | || |||| Sbjct 9228551 ACAGCGTGCCAGTGCCCATGCGGTCGTCCTTGCGGAAGCCGCCGTGCAGGATGCGCTCCA 9228610 Query 21610 GGTGCGCCAAGTACTGCAGCTCGCCGTGGTCGCCGCGGCA 21649 |||| || |||||||||||| ||||| || |||| || Sbjct 9228611 CCTGCG-CAGGTACTGCAGCTCCCCGTG--CGGCGCGCCA 9228647 >seq75 Length=11870250 Score = 158 bits (174), Expect = 1e-33 Identities = 143/180 (79%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048 |||||||||||||||| |||| || || || || || || |||||||||||||| || | Sbjct 4085025 TCAGGCCCGTGACGTGCGCGACCATGTAGGTGAGCAGCGCATAGCTGGCGATGTTGAAGG 4084966 Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAG 21108 | || || ||||||||||| | |||| ||||||||||||||||||||||||||| Sbjct 4084965 GCACGCCCAGGCCCATGTCCCCTGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATTCA 4084906 Query 21109 CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGG 21168 ||||||| ||||| |||| |||| || ||||| || |||||| | | ||| || |||| Sbjct 4084905 CCACGTAGAACTGGCACAGGGCGTGGCAGGGAGGCAGCGCCATCAGAGGGAGATCTGCGG 4084846 >seq107 Length=10030941 Score = 138 bits (152), Expect = 1e-27 Identities = 353/538 (66%), Gaps = 17/538 (3%) Strand=Plus/Minus Query 20931 TCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTC 20990 |||| ||| || ||| | || || || ||||| || ||||||||| |||| Sbjct 3003348 TCAATGTGATTCAGGTAGATATGTGCATCTCCCAAAGTATGCACAAAGCCTCC------- 3003296 Query 20991 AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGG 21050 |||| || |||| || || || || || ||||||||| ||||||| || || Sbjct 3003295 -------TGACATGCGCGACCAAGTAGGTGAGCAGCGCGTAGCTGACGATGTTGAAGGGC 3003243 Query 21051 ACCCCGAGGCCCATGTCGGCGGACCTCTG--GTACAGCTGGCAGGACAGCTCCCCCCGAG 21108 || || |||||||| || | |||| ||| |||| ||||||||||||||||||| Sbjct 3003242 ACTCCCAGGCCCATATCCCCTGACCACTGTGGTACGGCTGGCAGGACAGCTCCCCATTCA 3003183 Query 21109 CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGG 21168 |||||||||||| |||| ||| || ||||| ||||||||| | | ||| || Sbjct 3003182 CCACGTAAAACTAGCACAGGGTGTGGCAGGGAGGCAGAGCCATCAGAGGGAGATCTTTCA 3003123 Query 21169 GGTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGATCCACCA 21228 |||| || || ||||| | ||| | | || | || | || || | | || Sbjct 3003122 GGTTTCAGGCACACATGATGATCCTTCTGTCATCAGGGTTGGTTTTGATGGTGTTGATCA 3003063 Query 21229 CGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCG 21288 ||| |||||||||| | || ||||| ||| | | ||| || ||| || | Sbjct 3003062 CGTTCTGCAGCTGGTCATCTCCTTGACCTGAGTAATCTGAGTCCATACCTTCGTAGTCAG 3003003 Query 21289 CCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCC-TCGCGGCGGTCC 21347 ||| ||||| ||||||||||| || | || || ||||| || ||| || || || Sbjct 3003002 CCCTGAAATGCCTCCACTGGAAGCCACAGACGGGGCCCAGGTCCCCCTTCCTGGTGGCTA 3002943 Query 21348 CCGAAGCCCTGCGCCGCCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACGCCG 21407 || ||| | ||| || | |||||||| | || ||||| || || || || Sbjct 3002942 GAAAACCCCAGGCTATCCAGGAAATCCCGGGACCCATTGGCATCCCAGATCTTCACTCCT 3002883 Query 21408 CGGCGCGACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTCCTCCA 21465 | ||||| || ||| | | | ||| ||||||||||||||| ||||||| Sbjct 3002882 TTGGATGACAGCTCCTTGGCATTTGCATATCCCTTGATAAACCACAGCAGTTCCTCCA 3002825 >seq82 Length=12555031 Score = 138 bits (152), Expect = 1e-27 Identities = 409/628 (65%), Gaps = 22/628 (4%) Strand=Plus/Plus Query 20931 TCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTC 20990 |||| ||| || ||| | || ||||| |||| || ||||| ||||| || | || Sbjct 10556209 TCAATGTGATTCAAGTAGATATGTGCGTCTGCCAATGTATGCACCAAGTCACCTGCCTTC 10556268 Query 20991 AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGG 21050 | ||||| || ||| | || || || || || |||||||||||||||| || || Sbjct 10556269 AAGCCCGCGATGTGCGTGACCATGTAGTGGAGCAGCCCGTAGCTGGCGATGTTGAAGGGC 10556328 Query 21051 ACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCC 21110 || || ||||||| || | |||| |||||| ||||| ||||| | || Sbjct 10556329 ACACCCAGGCCCACGTTCTCTGACCGCTGGTATAGCTG--------GCTCCTCGTTCACC 10556380 Query 21111 ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGG 21170 ||||| ||||| |||| |||| || ||||| || |||||| | | ||| || | ||| Sbjct 10556381 ACGTAGAACTGGCACAGGGCGTGGCAGGGAGGCAGGGCCATCAGAGGGAGATCTGTTGGG 10556440 Query 21171 TTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAA-TTAGA-----TCC 21224 ||||| || ||||| | ||| | | | || || ||||| || || | Sbjct 10556441 TTCCAGGCACACATGATGATACTTCTGTTGTCAGG------GTTAACTTTGACGGTGTTG 10556494 Query 21225 ACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTAC 21284 | | | | ||||||||| || || ||||| ||| | | ||| | |||| Sbjct 10556495 ATCGCATTCTGCAGCTGGTTAACTCCTTGACCTAAGTAATCTGAGTCCATATCTTTGTAG 10556554 Query 21285 TCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGG 21344 || || | ||||| | ||||||||| | || || || ||||| || || | || || Sbjct 10556555 TCAGCACAAAAATACCACCACTGGAAGTCATAGACAGGGCCCAGGTCCCCTGCCTGGTGG 10556614 Query 21345 TCCCCGAAGCCCTGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTAC 21403 | || ||| | || | | || | ||||||| | || ||||| || || || Sbjct 10556615 TTAGAAAACCCCAG-GCAGTCTGGGAAATCCTGGGACCCATTGGCATCCCAGATCTTCAC 10556673 Query 21404 GCCGCGGCGCGACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTCCTC 21463 || | | ||| || ||| | || ||| ||||||||||||||| |||||| Sbjct 10556674 TCCCTTGGATGGCAGCTCTTTGGCACTTATAGATCCCTTGATAAACCACAGCAGCTCCTC 10556733 Query 21464 CACGACGCCCCTCCAAAACACCCTTTTGGTGGTTAACAGAGGAAACTCGTCCCTGAGGTT 21523 || || ||| |||| ||||| | |||||| || | ||| ||||| || | | ||| | Sbjct 10556734 CAGGATACCCTTCCAGAACACACGTTTGGTTGTCAGCAGGGGAAATTCAACTCGCAGGCT 10556793 Query 21524 ATATCGGGCCTGAAGCCCGAACACGGAC 21551 || || ||||| | |||||| | ||| Sbjct 10556794 GTAGCGCGCCTGCATGCCGAACCCCGAC 10556821 Score = 98.7 bits (108), Expect = 8e-16 Identities = 189/277 (68%), Gaps = 4/277 (1%) Strand=Plus/Minus Query 2969 GCATCGTCTAGCGTTCTCGCTAGAAAGTGTGCTCCGTGCGGTGGTTCACGTAATTCTCTG 3028 ||||| || || || || ||||| || ||||| || || ||||| | |||||| Sbjct 3134563 GCATCATCCAGACTTGGGGCAAGAAAATGAGCTCCTTGGGGAGGTTCCTTGAGTTCTCTA 3134504 Query 3029 CTCAAAATAATATTAATTCTGTTCACCAGAGGGCGCTTCTTTTCAGGGATGGAAAACCAT 3088 || | | ||||||||||||| || |||||| ||||| ||||| ||||| ||||| Sbjct 3134503 CTGAGTACTATATTAATTCTGTCTTTCAAAGGGCGATTCTTCTCAGGAATGGAGAACCAG 3134444 Query 3089 GTTCTTTTCCCCATAATAACCACATTCTTTTCACCTACAACCGATGGCGTAGACGTCATT 3148 || | | ||||| | |||| ||||| || |||| | || || | || | |||||| Sbjct 3134443 GTCTTCCTACCCATTACCACCAGATTCTGTTTACCTTCCACTGAGGTGGTTGTGGTCATT 3134384 Query 3149 TTCTGAAAATACATCATTTCGTTTCTAAGGTACGGCCAAGGCATTGTTCCGTTTTTACCA 3208 |||| || || | | ||| || || || ||||| |||| |||||| | || Sbjct 3134383 CTCTGGAAGTAGTTGAATTCATTCCTGAGCGGGGGCCAGGGCAAGTCTCCGTTCCTGCCG 3134324 Query 3209 ATTCCTAATTGTTC--ATCAACTGCAACGATGCAGTT 3243 || || | ||||| | || || ||||||||||| Sbjct 3134323 ATACCCA--TGTTCTGAGACACGGCGACGATGCAGTT 3134289 >seq109 Length=10228628 Score = 122 bits (134), Expect = 7e-23 Identities = 366/557 (66%), Gaps = 16/557 (3%) Strand=Plus/Plus Query 20955 GCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCC-GTGACGTGAGCGATCAG 21013 || || | ||| || ||||||||||| || || |||||||| | |||||| |||| || Sbjct 4836499 GCATCTCTCAAAGTATGCACAAAGTCACCTGGCTTCAGGCCCCGCGACGTGCGCGACAAG 4836558 Query 21014 ATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCGGCGGA 21073 || || || |||||||||| || | | | || || || ||||||||||| | || Sbjct 4836559 -TAGGTGAGCCCCGCGTAGCTGGTGAGGCTGCAGGGCACGCCCAGGCCCATGTCCCCTGA 4836617 Query 21074 CCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAACTGACACAAAACGTG 21133 || ||| ||||||||||||||||||| ||| | ||| | | ||| ||| Sbjct 4836618 CCGCTGCTACAGCTGGCAGGACAGCT---CCCTATTCAC-CAGAGCTG------GGTGTG 4836667 Query 21134 ACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCGCACATAACGATGCG 21193 || ||||| || |||| | | | ||| || |||||||| | | |||| | ||| | Sbjct 4836668 GCAGGGAGGCAGCGCCACCAGAGGGAGATCTTTCGGGTTCCAGGAGTACATGATGATCCT 4836727 Query 21194 CCGATCGTGGGGCCGCCTGTTAATTAGATCCACCACGTAACGCAGCTGGTCCACCCCCTG 21253 | ||| | || | || | | | || || |||||||| | || || || Sbjct 4836728 TCTATCATCAGGGTTGGTTTTGACAGCGTTGATCATGTTCTGCAGCTGGCCTACTCCTTG 4836787 Query 21254 ACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAATGTCTCCACTGGAACCC 21313 |||| | | | | ||| | |||| || ||||| ||||| ||||| |||| || Sbjct 4836788 ACCCGGGCAATCTGAGTCCATGTCTTTGTAGTCAGCCCCGAAATGCCTCCAGGGGAAGCC 4836847 Query 21314 GTACACCGGCCCCAGATCGCCCTCGCGGCGGTCCCCGAA-GCCCTGCGCCG-CCAAAAAG 21371 || || || ||||| | ||||| ||| | | ||| ||| || | ||| || Sbjct 4836848 ATAGACGGGGCCCAGGTGCCCCTCCTGGC--TGCTAGAACACCCCAGGCTGTCCAGGAAA 4836905 Query 21372 GCGCGGGACCCGTGCGCGTCCCAAATTTTTACGCCGCGGCGCGACAGTTCGGTGGAGTCG 21431 | | ||||||| || ||||| || || || || | ||||| || || | Sbjct 4836906 CCCCAGGACCCGCTGGCATCCCAGATCTTCACTCCTTTGGATGACAGCTCTTTGACATTA 4836965 Query 21432 GTGGAGCCCCTGATAAACCACAGCAACTCCTCCACGACGCCCCTCCAAAACACCCTTTTG 21491 || || || ||||||||||||| ||| |||| ||| ||| |||| ||||| | ||| Sbjct 4836966 GTAGATACCTTGATAAACCACAGTGGCTCGTCCAGGACACCCTTCCAGAACACACACTTG 4837025 Query 21492 GTGGTTAACAGAGGAAA 21508 || || | ||| ||||| Sbjct 4837026 GTTGTCAGCAGGGGAAA 4837042 >seq11 Length=28182674 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 2987 GCTAGAAAGTGTGCTCCGTGCGGTGGTTCACGTAATTCTCTGCTCAAAATAATATTAATT 3046 || ||||| || ||||| || || ||||| | |||||| || | | ||||||||| Sbjct 11213757 GCAAGAAAATGAGCTCCTTGGGGAGGTTCCTTGAGTTCTCTACTGAGTACTATATTAATT 11213698 Query 3047 CTGTTCACCAGAGGGCGCTTCTTTTCAGGGATGGAAAACCATGTTCTTTTCCCCATAATA 3106 |||| || |||||| ||||| ||||| ||||| ||||| || | | ||||| | Sbjct 11213697 CTGTCTTTCAAAGGGCGATTCTTCTCAGGAATGGAGAACCAAGTCTTCCTACCCATTACC 11213638 Query 3107 ACCACATTCTTTTCACCTACAACCGATGGCGTAGACGTCATTTTCTGAAAATACATCATT 3166 |||| ||||| || |||| | || || | || | |||||| |||| || || | | | Sbjct 11213637 ACCAGATTCTGTTTACCTTCCACTGAGGTGGTTGTGGTCATTCTCTGGAAGTAGTTGAAT 11213578 Query 3167 TCGTTTCTAAGGTACGGCCAAGGCA 3191 || || || || ||||| |||| Sbjct 11213577 TCATTCCTGAGCGGGGGCCAGGGCA 11213553 >seq10 Length=29551940 Score = 91.5 bits (100), Expect = 1e-13 Identities = 154/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 2969 GCATCGTCTAGCGTTCTCGCTAGAAAGTGTGCTCCGTGCGGTGGTTCACGTAATTCTCTG 3028 ||||| || || || || ||||||| ||||| || || ||||| | |||||| Sbjct 24703311 GCATCATCCAGACTTGGGGCAAGAAAGTCAGCTCCTTGGGGAGGTTCCTTGAGTTCTCTA 24703252 Query 3029 CTCAAAATAATATTAATTCTGTTCACCAGAGGGCGCTTCTTTTCAGGGATGGAAAACCAT 3088 || | | ||||||||||||| || |||||| ||||| ||||| ||||| ||||| Sbjct 24703251 CTGAGTACTATATTAATTCTGTCTTTCAAAGGGCGATTCTTCTCAGGAATGGAGAACCAG 24703192 Query 3089 GTTCTTTTCCCCATAATAACCACATTCTTTTCACCTACAACCGATGGCGTAGACGTCATT 3148 || || | | ||| | |||| ||||| || |||| | || || | || | |||||| Sbjct 24703191 GTCTTTCTACTCATTACCACCAGATTCTGTTTACCTTCCACTGAGGTGGTTGTGGTCATT 24703132 Query 3149 TTCTGAAAATACATCATTTCGTTTCTAAGGTACGGCCAAGGCA 3191 |||| || || | | ||| || || || ||||| |||| Sbjct 24703131 CTCTGGAAGTAGTTGAATTCATTCCTGAGCAGGGGCCAGGGCA 24703089 >seq125 Length=9353109 Score = 89.7 bits (98), Expect = 4e-13 Identities = 121/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 2987 GCTAGAAAGTGTGCTCCGTGCGGTGGTTCACGTAATTCTCTGCTCAAAATAATATTAATT 3046 || ||||| || ||||| || || ||||| | |||||| || | | ||||||||| Sbjct 7288459 GCAAGAAAATGAGCTCCTTGGGGAGGTTCCTTGAGTTCTCTACTGAGTACTATATTAATT 7288518 Query 3047 CTGTTCACCAGAGGGCGCTTCTTTTCAGGGATGGAAAACCATGTTCTTTTCCCCATAATA 3106 |||| || |||||| ||||| ||||| ||||| ||||| || | | ||||| | Sbjct 7288519 CTGTCTTTCAAAGGGCGATTCTTCTCAGGAATGGAGAACCAAGTCTTCCTACCCATTACC 7288578 Query 3107 ACCACATTCTTTTCACCTACAACCGATGGCGTAGACGTCATTTTCTGAA 3155 |||| ||||| || |||| | || || | || | |||||| |||||| Sbjct 7288579 ACCAGATTCTGTTTACCTTCCACTGAGGTGGTTGTGGTCATTCTCTGAA 7288627 >seq272 Length=2648510 Score = 87.8 bits (96), Expect = 2e-12 Identities = 124/173 (72%), Gaps = 1/173 (1%) Strand=Plus/Plus Query 2987 GCTAGAAAGTGTGCTCCGTGCGGTGGTTCACGTAATTCTCTGCTCAAAATAATATTAATT 3046 || |||||||| ||||| || || ||||| | |||||| || | | ||||||||| Sbjct 1736419 GCAAGAAAGTGAGCTCCTTGGGGAGGTTCCTTGAGTTCTCTACTGAGTACTATATTAATT 1736478 Query 3047 CTGTTCACCAGAGGGCGCTTCTTTTCAGGGATGGAAAACCATGTTCTTTTCCCCATAATA 3106 |||| || |||||| ||||| ||||| ||||| ||||| || | | ||||| | Sbjct 1736479 CTGTCTTTCAAAGGGCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCTACCCATTACC 1736538 Query 3107 ACCACATTCTTTTCACCTACAACCGATGGCGTAGACGTCATTTTCTGAAAATA 3159 |||| ||||| || || | | || || || || | |||||| |||| || || Sbjct 1736539 ACCAGATTCTGTTTACTTTCCACTGA-GGTGTTGTGGTCATTCTCTGGAAGTA 1736590 >seq20 Length=23447253 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 2987 GCTAGAAAGTGTGCTCCGTGCGGTGGTTCACGTAATTCTCTGCTCAAAATAATATTAATT 3046 || ||||| || ||||| || || ||||| | |||||| || | | ||||||||| Sbjct 11127135 GCAAGAAAATGAGCTCCTTGGGGAGGTTCCTTGAGTTCTCTACTGAGTACTATATTAATT 11127194 Query 3047 CTGTTCACCAGAGGGCGCTTCTTTTCAGGGATGGAAAACCATGTTCTTTTCCCCATAATA 3106 |||| || |||||| ||||| ||||| ||||| ||||| || | | ||||| | Sbjct 11127195 CTGTCTTTCAAAGGGCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCTACCCATTACC 11127254 Query 3107 ACCACATTCTTTTCACCTACAACCGATGGCGTAGACGTCATTTTCTGAAAATACATCATT 3166 |||| ||||| || |||| | || || | || | |||||| |||| || || | | | Sbjct 11127255 ACCAGATTCTGTTTACCTTCCACTGAGGTGGTTGTGGTCATTCTCTGGAAGTAGTTGAAT 11127314 Query 3167 TCGTTTCTAAG 3177 || || || || Sbjct 11127315 TCATTCCTGAG 11127325 >seq16 Length=26446888 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 2969 GCATCGTCTAGCGTTCTCGCTAGAAAGTGTGCTCCGTGCGGTGGTTCACGTAATTCTCTG 3028 ||||| || || || || |||||||| ||||| || || ||||| | |||||| Sbjct 10248913 GCATCATCCAGACTTTGGGCAAGAAAGTGAGCTCCTTGGGGAGGTTCCTTGAGTTCTCTA 10248854 Query 3029 CTCAAAATAATATTAATTCTGTTCACCAGAGGGCGCTTCTTTTCAGGGATGGAAAACCAT 3088 || | | ||||||||||||| || ||||| ||||| ||||| ||||| || || Sbjct 10248853 CTGAGTACTATATTAATTCTGTCTTTCAAAGGGCAATTCTTCTCAGGAATGGAGAATCAG 10248794 Query 3089 GTTCTTTTCCCCATAATAACCACATTCTTTTCACCTACAACCGATGGCGTAGACGTCATT 3148 || | | ||||| | |||| ||||| || |||| | || || | || | |||||| Sbjct 10248793 GTCTTCCTACCCATTACCACCAGATTCTGTTTACCTTCCACTGAGGTGGTTGTGGTCATT 10248734 Query 3149 TTCTGAAAATA 3159 |||| || || Sbjct 10248733 CTCTGGAAGTA 10248723 >seq126 Length=8042663 Score = 82.4 bits (90), Expect = 7e-11 Identities = 142/205 (69%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 2987 GCTAGAAAGTGTGCTCCGTGCGGTGGTTCACGTAATTCTCTGCTCAAAATAATATTAATT 3046 || |||||||| ||||| || || ||||| | |||||| || | ||||||||| Sbjct 3548722 GCAAGAAAGTGAGCTCCTTGGGGAGGTTCCTCGAGTTCTCTACTGAGTCCTATATTAATT 3548781 Query 3047 CTGTTCACCAGAGGGCGCTTCTTTTCAGGGATGGAAAACCATGTTCTTTTCCCCATAATA 3106 |||| || ||| | |||||| ||||| ||||| ||||| || | || ||||| | Sbjct 3548782 CTGTCTTTCAAAGGTCACTTCTTCTCAGGAATGGAGAACCAGGTCTTCTTACCCATTACC 3548841 Query 3107 ACCACATTCTTTTCACCTACAACCGATGGCGTAGACGTCATTTTCTGAAAATACATCATT 3166 |||| ||||| || |||| | || || | || | ||| || |||| || || | | | Sbjct 3548842 ACCAGATTCTGTTTACCTTCCACTGAGGTGGTTGTGGTC-TTCTCTGGAAGTAGTTGAAT 3548900 Query 3167 TCGTTTCTAAGGTACGGCCAAGGCA 3191 || || || || ||||| |||| Sbjct 3548901 TCATTCCTGAGTGGGGGCCAGGGCA 3548925 >seq111 Length=10255479 Score = 82.4 bits (90), Expect = 7e-11 Identities = 122/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 2987 GCTAGAAAGTGTGCTCCGTGCGGTGGTTCACGTAATTCTCTGCTCAAAATAATATTAATT 3046 || |||||||| ||||| || || ||||| | ||||| || | | ||||||||| Sbjct 169004 GCAAGAAAGTGAGCTCCTTGGGGAGGTTCCTTGAGTTCTCCACTGAGTACTATATTAATT 169063 Query 3047 CTGTTCACCAGAGGGCGCTTCTTTTCAGGGATGGAAAACCATGTTCTTTTCCCCATAATA 3106 |||| || |||||| ||||| ||||| ||||| ||||| || | | | ||| | Sbjct 169064 CTGTCTTTCAAAGGGCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCTACTCATTACC 169123 Query 3107 ACCACATTCTTTTCACCTACAACCGATGGCGTAGACGTCATTTTCTGAAAATA 3159 |||| ||||| || |||| | || || | || | |||||| |||| || || Sbjct 169124 ACCAGATTCTGTTTACCTTCCACTGAAGTGGTTGTGGTCATTCTCTGGAAGTA 169176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427738801534800