Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octodon_20degus_20[refseq_20GCF_5F000260255.1_202012-05-01] 7,135 sequences; 2,995,889,303 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq288 473 2e-128 seq187 260 2e-64 seq206 206 4e-48 seq151 134 2e-26 seq146 116 5e-21 seq64 114 2e-20 >seq288 Length=2168581 Score = 473 bits (524), Expect = 2e-128 Identities = 1003/1486 (67%), Gaps = 22/1486 (1%) Strand=Plus/Plus Query 79204 ATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCA 79263 || || || || |||| || ||| ||||| || || | || | ||||||||| | ||| Sbjct 510231 ATCTTCTCCTTGAGAGGTTTCCAGTCCCACAGGTCTGTGGGAATAACATTCCACATGTCA 510290 Query 79264 TATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTT 79323 || || || || || || || | | ||| || ||||||| || || || Sbjct 510291 TACTGAAGGATTCCTTTGCTTACTGGACAGCCTTCATAGATTTCATATGGGCCAAGCTCC 510350 Query 79324 TCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTA 79383 | ||||| ||||| || || || | ||||| |||||||| ||||| | || | ||| Sbjct 510351 TTGGCTAGCTCACAGCTGGCTTCCAGGGCTCCATAATAAATAGTTTCAAGGATTTATTTA 510410 Query 79384 TTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCT 79443 || | || || |||| || ||||| ||||| | | || ||||| | ||| | Sbjct 510411 TTTAATAACTGGGCCTCTATACTCTCAAAAGGATATCTCATCAGGATAAAGGTATCTACC 510470 Query 79444 AATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGA 79503 | ||||| || ||||| || || |||||||| | ||||| || | | || ||||| Sbjct 510471 AGCCCTTGTACTCCAATTCCAATGGGTCTATGGCATTTATTTGATAAATGTGCCTCTGGG 510530 Query 79504 ATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATTACTTTGACCACA 79563 | |||||| | | ||||| ||||||||||| | ||| | ||| || ||||| || Sbjct 510531 ACAGGATAGT---TTATATCGATAATTTTATTCAAATTTCGGACAATAGCTTTGGTGACT 510587 Query 79564 TCCTTTAGTTTGAGAAAATCAAATC---GTCCATCTATTACAAACATGTTCAACGCGACA 79620 || | ||| ||| || || || | | | ||| |||| |||| || | Sbjct 510588 TCTGCCAATTTCTCAAAGTCGTATGTGTGTTCTGGTGTAACATACATATTCAGGGCCAGG 510647 Query 79621 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAG 79680 || |||| |||||||| || |||||||| | ||||| | |||||| ||||| Sbjct 510648 GAAGCCAAGTTACAAACTGCAACCTCATTTTTGCTGGTATATTCAACTATTTCTGTGCAC 510707 Query 79681 AGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 79740 ||||| || || || || ||||| | || || || || ||||| ||||| | ||| Sbjct 510708 AGGTTGCTGCATTTGATTGTTCCCAGGTTCTGCTGGTTGCTCTTCCGATTACAGGAATCT 510767 Query 79741 TTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-C 79799 || || || ||| || | ||||| | || ||||||| || | || | | ||| | | Sbjct 510768 TTGTAGAGCATGTACAGGGTACCCGGCTCTGTCTGAGACTCAGTGATGGTGTACCAAAGC 510827 Query 79800 GACTCGAGCCTTTATTA--TAG---ACTTGTATCTCTTTTCTCTTTCGTATTGTGTATAT 79854 || |||| |||| | | | || || | || ||| ||| || | |||| Sbjct 510828 TGCT-GAGCTTTTACAACTTTGCGAACATG-ACCTTGTTT----TTCATAACTTTCATAT 510881 Query 79855 AATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATC 79914 || || || || ||||||||||| || || | |||||||| || | ||||||| | Sbjct 510882 AACTTCTCAAATTCCTCTCCCCAAACCTCATCCAGGCCAGGACACTCATTTGGACACAGC 510941 Query 79915 AACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 79974 || ||||| || || | || |||||||||||| ||||||| |||||||||| || Sbjct 510942 AAAGACCAGTCCTGATTAGTCTCTACTCGTTTCATGAAGAGATTCAGAATCCAAAGGGCA 511001 Query 79975 ATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 80034 | || |||| |||| | ||||| || |||||||| |||||||| | ||| || ||| Sbjct 511002 AAGAAAAGATTCCTGGCACGCTGCTCTTCTTTTCCTGTGTTCTTTTTTAAATCAAGAAAC 511061 Query 80035 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTT 80094 | | || || ||||||| || |||| ||| || || | | || || | |||||| Sbjct 511062 TCAAAGATGTCTAAATGCCAAGGCTCCAGGTAAATAGCAAATGCCCCAGGGCACTTGTTT 511121 Query 80095 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 80154 || || ||||| | || | ||| ||||| ||||| ||||||| |||||| | || ||| Sbjct 511122 CCACCTTGATCAACATAACGAGCTGTGTTGTTATACACTCTCAGCATTGGTACAAGGCCA 511181 Query 80155 TTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT 80214 || || | ||||||||||| | || ||||| ||| | || | |||| ||| | | Sbjct 511182 TTAGAATTGCCATTGGTCCCAGCTATGTAGCTGCCAGTAGCCCAAATACAACTCACAGTG 511241 Query 80215 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 80274 | ||| ||||| || || |||||| || ||||| || | || | || ||||| ||| Sbjct 511242 ACACCAATTCCTCCAGCGGATTTAGAAATCAATGCACACTGCTTCAGAGTGTCATAAATG 511301 Query 80275 CCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTA 80334 || || |||| ||||| |||| | || || |||||||| || | ||| | | | Sbjct 511302 CCTTCGGTGCTGTCATCTTTCATACTCAGAAGGAAACAGCTTGAAAGTTGTGGGCAGTTG 511361 Query 80335 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTG 80394 || | ||||| || | | |||||||| || |||||||| || | || || || ||| Sbjct 511362 GTACTAGCATTGAAGAGAGAGGGAGAAGCATGAGTAAACCACTTCTGGGAAAGAAGGTTG 511421 Query 80395 TACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAAC 80454 || || ||||| || | ||||| || || ||||| || || | || | ||| ||| Sbjct 511422 TATGTTTCAATTGCAGCCTCTATGTCTTCTTTGTGAATCCCCACAGACACCCTCATCAAC 511481 Query 80455 ATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAA 80514 || ||||| || |||||| | | || ||| || |||||||| || || | |||| | Sbjct 511482 ATATGCTGCGGCCTTTCAGCCACTTTTCCATTGATCTTCAACAAATAGGACCTCTCCAGA 511541 Query 80515 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGT 80574 || ||||| ||||| || || || || || |||| || || || || | || || || Sbjct 511542 GTCTTAAAGCCAAAGTAATTATAAGAGAAATCTCAGTCATAGATGATGGCAGAATTCAGG 511601 Query 80575 TTATCCTTATATTTGTTAACTACATCCA-TGGTGATACTT-GAAATAATCGGAGAATGTT 80632 ||| |||| ||| | ||||| || || |||| | | || |||||||||| Sbjct 511602 CGATCTTTATGGGCCAAAACAATATCCAGTGTTG--ACTTGGCCACCATGGGAGAATGTT 511659 Query 80633 TCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTC 80678 | ||||| | ||||| | ||||||||| | |||||||| || || Sbjct 511660 TGCCATTATGTGGATTTATATAGTTGAAGAGGTCCTCCATTACATC 511705 Score = 161 bits (178), Expect = 1e-34 Identities = 297/430 (69%), Gaps = 9/430 (2%) Strand=Plus/Plus Query 78742 GGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGC 78801 ||| | || | || ||| ||||| || || || | | | || |||| | ||||| || Sbjct 508938 GGTCTTGTCCTTAAATAATACATCCCAGTCTTCAAATCCAGCTTCCAAGCATAGAAGTGT 508997 Query 78802 ATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGA 78861 |||| || || ||| || | || || || || ||||| |||| | | || || ||| Sbjct 508998 GTACTGGTGAGCTTGTG-TAGTTGGGCTCAGCAATGTGGATGTTCAAAAACTGGCTCTGA 509056 Query 78862 TCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAA 78921 || ||||| || || | || |||||||| || | || || || || | |||||||| Sbjct 509057 TCAATGAAAGCACCACGATCAGCAGCCATCTTCAGGACAGTTTTCTGAGAGATTTCCCAT 509116 Query 78922 ATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TAT--TCTGAATGGATC 78976 | || ||||||| | || | || || |||| ||| ||| |||| || || | Sbjct 509117 ACTGTCTTATAAAGCTGGTTCAGGTCATCGGGAA--TTTCCACTATGCTCTGGATAGAGC 509174 Query 78977 CACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAA 79036 || || |||||| ||| || || |||||||||||||| | |||||| | | Sbjct 509175 CATTGCAGGCAATAATCTGATTTTTCATTTCTTCATTCCATAAGCCCCGCTCGGTAAGAT 509234 Query 79037 CTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAA 79096 || | | || || ||||| || | ||||||||||| || || ||||| ||||||| | Sbjct 509235 CTTTCAATAG-TGAGGATTTACAATCTGAAATTCTCCTGATAAGACTCTTAGAGTGTAGA 509293 Query 79097 TATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCG 79156 | || |||||||| ||||| | || ||||| |||| ||| || ||||||||||| || | Sbjct 509294 TGTTGCTGGTATAAGGTTCAATAGACTCATTTTTTCTCAAGATCTGAGCAGTTGAAGCAG 509353 Query 79157 TTGGCATAGG 79166 | | ||| || Sbjct 509354 TAGTCATGGG 509363 >seq187 Length=5094135 Score = 260 bits (288), Expect = 2e-64 Identities = 527/777 (68%), Gaps = 9/777 (1%) Strand=Plus/Plus Query 49613 TTTAAAAGTCAACATCTAGAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTT 49669 ||||||||||| |||| || |||| ||| || || |||||||||||||| Sbjct 4782 TTTAAAAGTCAGCATCCCAAGTAAAAGAATTCTCCATAGGAATGGACATAACTCCCATAG 4841 Query 49670 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT- 49728 | || || ||||| || || || || || || || || |||||||| || |||||| Sbjct 4842 TCTGATACTCACCAACTATCTTCTCAAAGAAGTTTGTCTTCCCTTCCAAAGAAATATTTC 4901 Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788 || ||||| ||||| ||||| || ||| || | || || | ||| || Sbjct 4902 TCTATGAAGTCAAATGGATTTTCCACTCGGAAAACCTTGCTGAAGCCTAGTTCCAGCATG 4961 Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 49848 | || || || ||||| | || | |||||||| | | ||||| || ||| | Sbjct 4962 AGCCTGTCAGCCACAAACTTGATGCACTGTTTCATCAAATTGGAGTTCATCCCGATAGGC 5021 Query 49849 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 49908 || || || | || | || || || || || |||||| | || | | | ||| Sbjct 5022 TTCACCGGCAAGCCCTCCGTGAGGAACTCCTGCTCAATGCCGATGGCGTTGATGACAATC 5081 Query 49909 GATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAA 49968 || || | | || ||| |||| | || || ||||||| || |||| Sbjct 5082 TCCCTCACCCTCTGCTCCAACGGCTTGTGCACCAGGTGCTTGAACATCAGGCACACGAAG 5141 Query 49969 TCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATT 50028 || || ||| ||||||| ||| ||||| |||||||||||||| ||||| || ||||| Sbjct 5142 TCACAACGCAAGCCCTCGTATCTGCTAATGAGTTCGTTGGAAAAGGTGAGGCCAGGCATG 5201 Query 50029 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCT 50088 ||||| || || || ||||| || || ||||||| || ||||||||||| |||||||| Sbjct 5202 AGGCCCCGTTTCTTGAGCCAGAAGATCAACGCAAAAGAACCAGAAAAGAAAATTCCTTCC 5261 Query 50089 ACTGCGGCAAAGGCAACAAGTCT-CTCTCCATAACTGG---CGCTGTCATGTATCCACTT 50144 || | | ||||||| || || | |||||||| ||| | |||| |||||| Sbjct 5262 ACAGTGACAAAGGCCAC-CGTGTGTTCTCCATATGTGGCCTCTTTGTCCCCTATCCAGCG 5320 Query 50145 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 50204 ||||| || |||||||| || ||||| | || || || ||||||| |||||| | Sbjct 5321 CAACGCCCAGTCTGCCTTCTTCTTCACACAGGCCACGGTCTCAGTGGCATTGAAGAGAAA 5380 Query 50205 GtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATG 50264 | |||| | |||| ||| ||||| || || | || | |||||||||||||| Sbjct 5381 CTCCCTTTCTTGGGAATCTCTAATGTAAGTGTCCATAAGGAGTGTGTACATTTCCGAATG 5440 Query 50265 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTC 50324 | |||||| ||||| ||||| || ||||||||||| | || || ||||| || ||||| Sbjct 5441 CAGGTTTTCCATGGCAATCTGGAAGCCGTAGAAACACCGGGCTTCTGTAATTTGAACTTC 5500 Query 50325 TGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 50381 | |||||| || | | ||| ||| | ||||| || || ||||| | |||||| Sbjct 5501 TTGGTTAAATCGCTCCACCAGATTCTCACTGACTATGCCATCGCTGGCAGGAAAAAA 5557 >seq206 Length=4534510 Score = 206 bits (228), Expect = 4e-48 Identities = 1048/1643 (64%), Gaps = 67/1643 (4%) Strand=Plus/Plus Query 78785 TCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 78844 |||| || ||||| |||||||| || || | | |||| | || || || || ||||| | Sbjct 2975273 TCCAACCATAGAAGTGCATACTGGTGAGCTCGCTATAATTGGGCTCAGCCATGTGGATGT 2975332 Query 78845 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 78904 ||| ||| || | ||||| | || || || || | |||||| || | || || | Sbjct 2975333 TCAAAGACTGGATCTGATCAACCAAAGCACCATGATCAGAAGCCATCTTGAGGACAGTTT 2975392 Query 78905 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTT-TGTA 78963 | || | |||||||| | ||||||| |||| | || || |||| | | || Sbjct 2975393 TCTGAGAGATTTCCCATCCGATCTTATAAAGCTGCTTCAGGTCATCAGGAATTTCCTCTA 2975452 Query 78964 T--TCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATT 79021 | |||| || || ||| || |||||| ||| || || ||| ||||||||| Sbjct 2975453 TGCTCTGGATAGAGCCATTGCAGGCAATAATCTGATTTTTCATTCCTTTATTCCATAAGC 2975512 Query 79022 TTCTCTCGGTTAAAACTCT-AAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAAT 79080 ||| | | | || | || ||| | ||||| || | | ||||||| | ||||| Sbjct 2975513 CCTGCTCCATAAGATCTTTCAATAAGA-GAGGATTTACAATCTTAAATTCTTCTGACAAG 2975571 Query 79081 ACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATT 79140 ||| | | |||||| || || |||||||| |||| | || | |||||| ||||| || Sbjct 2975572 ACTTTTCAAGTGTAGATGTTGCTGGTATAAAGTTCAATAGACTTATTATTCCCCAAGATC 2975631 Query 79141 TGAGCAGTTGATGCCGTTGGCA-TAGGTGCCACCAATAAACTATTT------CTAAG--A 79191 ||||||||||| || | || | |||| || | | || |||| || || | | Sbjct 2975632 TGAGCAGTTGAAGCACTAGGAAGTAGG-GCAATAAGTAGACTACTTTTTCATCTTTGCAA 2975690 Query 79192 CCGTATGATCTG-----ATTT---TAT----CTTTTAGAGATTCCC-------AATCCCA 79232 | | ||||| |||| ||| ||| || | | | ||| ||| Sbjct 2975691 TCTTCTGATCAAGAGGTATTTAAGTATACCCCTTGCAGTCACTGCAGACCTAGAATTCCA 2975750 Query 79233 AAGATCAGACGGGAC-------AACATTCCAAAGATCATATTGTAGAATACCGTTACTAG 79285 | |||| | | | ||||||||| | |||||| || || || || || || Sbjct 2975751 CATATCATCCTGAAGTATGAGTAACATTCCACATATCATACTGAAGGATTCCTTTGCTTA 2975810 Query 79286 CGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCT 79345 | || ||| || |||||||| || || | || | ||||| ||||| || || | Sbjct 2975811 CCAGAGAGCCTTCATAGGTTTCATATGGGCCATGCTCCTTGGCTAGATCACAGCTGGCTT 2975870 Query 79346 CTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGC 79405 | || ||||| ||||||| || | | || | ||||| | || | ||| | | Sbjct 2975871 CCAAGGCTCCATAATAAACAGTCACAATGATTTGGTTATTTCAAAACTGGGACTCTGGAC 2975930 Query 79406 TATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGA 79465 | ||||| | || | | || ||||| || |||| | | ||| || |||| | | Sbjct 2975931 TCTCAAAATGTTATCTCATCAGGATAAAAGCATCTGTGAGCCGTTGTACTCCAACTTCAA 2975990 Query 79466 TAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTA 79525 | || ||| ||||| || | | || |||| | ||| || || || || || | Sbjct 2975991 TGGGGAAATGATGTTTATTTGATAAGTGTGCCTCTGAGACAGGGTAGTATTTTATGTCAA 2976050 Query 79526 TAATTTTATTGAGATTCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAA 79585 |||||||||| ||||| ||| || ||| || || | | ||| | | ||| Sbjct 2976051 TAATTTTATTCAGATTTTGGACAATATCTTCCGTGACTTCTGTCAATTTCTCATAGTCAT 2976110 Query 79586 ATC-GTCCATCTATTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACC 79644 || || | | | ||| |||| |||| || | || |||| ||||||| || ||| Sbjct 2976111 ATGTGTTCTGATGTAACATACATATTCAGGGCCAGGGAAGCCAAGATACAAACTGCAACC 2976170 Query 79645 TCAT--TAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTC 79702 |||| | || | |||| || ||||| ||| ||||| || || || || |||| Sbjct 2976171 TCATCTTTGCTG--GTCTATTCTACCATTTCTGTGTGCAGGTTGCTGCATTTGATTGTTC 2976228 Query 79703 CTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTAC 79762 | | || | || || ||||| |||| | | || ||| || || ||||| || |||| Sbjct 2976229 CCAGGTTCTTCTGGTTGCTCTTCCAGTTATAAGAATGCTTGTAGAGCATGAATGGGGTAC 2976288 Query 79763 CAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACT 79822 | || | ||||||| || || || | | ||| | | || | ||| | | | ||| Sbjct 2976289 CCGTCTG--TCTGAGACTCAATGATGACATACCA-ATG-CTGCTGAATTT-TCACA-ACT 2976342 Query 79823 TGT--ATCTCTT--TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAA 79878 | | | | || | |||| || |||||| || || || ||||||||| Sbjct 2976343 TTACGAACACGACCTTGTTTTTCATAACTCTCATATAAGGTATCAAATTCCTCTCCCCAA 2976402 Query 79879 ACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTT 79938 || ||||| | |||||||| | | | |||||||| || || || | | || | Sbjct 2976403 ACCTCGTCCAGACCAGGACACCCATTTTG-CACATCAAAGATCAGTCCTGAATAGTCTCT 2976461 Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGG--TTCTAT 79996 || |||||| |||||||| |||||||| | || | || ||||| || | | || | Sbjct 2976462 GATCATTTCATGAAGAGATCCAGAATCCAAGGTGCAAAGAAAAGATCCCTAGCATGCTGT 2976521 Query 79997 GCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACG 80056 |||| ||||||||||||||| | ||| || ||| | | || || ||||| | Sbjct 2976522 TCTCCC--TTTCCTGTATTCTTT---AAATCAAGAAACTCAAGCATTTCTAAATGCTGAG 2976576 Query 80057 GTTCCAAGTATATGGC-CATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTA 80115 |||||| | || | || || || | | || ||||| | |||| | || ||| Sbjct 2976577 CCTCCAAGGAAATAACAAATGAC-CCAAGGCACTTATTTCCACTTTGATGAACATAACTA 2976635 Query 80116 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCG 80175 | ||||| ||||| ||||||| |||||| |||| |||||| || | |||||||||| Sbjct 2976636 TCTGTGTTGTTATACACTCTCAGCATTGGTATAAGACCATT-AATATTCCATTGGTCCAA 2976694 Query 80176 GAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATT 80235 | || |||| || | || |||| | ||| | | | ||| ||||| || || | Sbjct 2976695 GCTATGCAGCTATCAGTAGCCTGAATGTAACTCACAGCAACACCAATTCCACCAGCAGAT 2976754 Query 80236 TTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATC 80295 ||||| || ||||| | | || | || | || ||||| | ||||| ||||| || Sbjct 2976755 TTAGAAATCAATGCATACTGCTTCAGAGTGTAGTAAATGCCTTTGATGCTGTCATCTTTC 2976814 Query 80296 ATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTA 80355 || | || |||||| |||| || ||||| | | | || | | ||| || | || Sbjct 2976815 ATAATCAGAAGAAAAAAGCTTGAAATTTGTGGGCAGTTGGTATCAGAATTGAAGAGAGTG 2976874 Query 80356 GGAGAAGCGTGCGTAAACCATTT 80378 |||||||| || ||||| || || Sbjct 2976875 GGAGAAGCATGAGTAAAGCACTT 2976897 >seq151 Length=7174217 Score = 134 bits (148), Expect = 2e-26 Identities = 104/124 (84%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||||||||| ||||| |||||||||||||| ||||| || ||||| || || || || | Sbjct 1182556 CCTCGTCTCTGCTAATGAGTTCGTTGGAAAAGGTGAGGCCAGGCATGAGTCCTCGTTTCT 1182497 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | ||||| || || |||||||| || |||||||||||||| ||||| || |||||||||| Sbjct 1182496 TGAGCCAGAAGATTGACGCAAAAGAACCAGAAAAGAAGATGCCTTCCACAGCGGCAAAGG 1182437 Query 50102 CAAC 50105 | || Sbjct 1182436 CCAC 1182433 Score = 100 bits (110), Expect = 4e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 50220 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 50279 |||||||| ||||| || || | ||||| |||||||||||||| |||||||| || || Sbjct 1180952 ATCTTTAATGTAAGTGTCAATAAGCAGACTGTACATTTCCGAATGTATGTTTTCCATAGC 1180893 Query 50280 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTC 50339 ||||| || ||||||||||| | || || ||||| || |||||| | |||||| || Sbjct 1180892 AATCTGGAAGCCGTAGAAACAACGGGCTTCTGTAATTTGAACTTCTTGGCTAAATCGCTC 1180833 >seq146 Length=7541600 Score = 116 bits (128), Expect = 5e-21 Identities = 106/134 (79%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 79060 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACC 79119 || ||||||||||| ||||| ||||| |||||||| || || |||||||| ||||| | Sbjct 3726378 ACCTGAAATTCTCCTGACAAGACTCTTCGAGTGTAGATGTTGCTGGTATAAGGTTCAATA 3726319 Query 79120 GATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAA 79179 || || ||||||||||| || ||||||||||| || || ||||| || || | | || | Sbjct 3726318 GACTCGTTATTTCCCAAGATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAGA 3726259 Query 79180 CTATTTCTAAGACC 79193 || ||||| | ||| Sbjct 3726258 CTGTTTCTTATACC 3726245 Score = 105 bits (116), Expect = 1e-17 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 79935 CTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 79994 || |||||||||||| |||||||| ||||||||||| || | || |||||||||| | Sbjct 3714763 CTCTACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGATCTCTGGCACG 3714704 Query 79995 ATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 80054 ||||| || |||||||| ||||| || | ||| || ||| | | || || ||||||| Sbjct 3714703 CTGCTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCA 3714644 Query 80055 CGGTTCCAAGTATATGGC 80072 || |||| ||| || || Sbjct 3714643 AGGCTCCAGGTAAATAGC 3714626 >seq64 Length=12756018 Score = 114 bits (126), Expect = 2e-20 Identities = 215/315 (68%), Gaps = 1/315 (0%) Strand=Plus/Minus Query 50221 TCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 50280 ||| | | ||| ||||| || | | || ||||| || || |||| || || ||| Sbjct 2273454 TCTCTGATATAGGTATCTATGAGCAAGCTGTACATCTCTGAGTGAACATTCTCGATGAGG 2273395 Query 50281 ATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCA 50340 ||||| || |||||||| || | ||||| | | |||||| || | || || || Sbjct 2273394 ATCTGGAAGCCGTAGAAGCAGCGGGCCTCAGGGACCTGCACCTCCTGGCTGAAGCGCTCC 2273335 Query 50341 GCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA-ACGCCAATACATGTTTTAT 50399 | || |||||||| || ||||| ||| | |||||||||| | || || || || || Sbjct 2273334 ACCAAGTTTTCATTTACAATTCCATCATTTGCTGCAAAAAGAGGCTAAGACGTGAGAAAT 2273275 Query 50400 AAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTAC 50459 ||| | ||| || | || | || |||| ||| | | | ||| || |||| ||| || Sbjct 2273274 AAAGTATTTCTCATCCGGCTTGAGCTTATGCCAGTGAGGCAGATCCTTTGATAGATCAAC 2273215 Query 50460 TTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATA 50519 || || | ||||| || |||| || ||| || ||||| ||||||||||| | || Sbjct 2273214 CTCCTCTGCCGTCCAGAAGGATGTCTGCACCTGCTTGTACATCTTCCAGATGTCGGGGTA 2273155 Query 50520 TTGGATTGGGAAAAT 50534 ||||| ||||| || Sbjct 2273154 CTGGATGGGGAAGAT 2273140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718204739401400