Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octodon_20degus_20[refseq_20GCF_5F000260255.1_202012-05-01] 7,135 sequences; 2,995,889,303 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq288 446 2e-120 seq187 224 1e-53 seq206 154 2e-32 seq146 131 2e-25 seq151 120 4e-22 seq6919 87.8 2e-12 >seq288 Length=2168581 Score = 446 bits (494), Expect = 2e-120 Identities = 921/1360 (68%), Gaps = 14/1360 (1%) Strand=Plus/Plus Query 71409 GGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATT 71468 |||||| ||||| || || || | |||||||||||||| ||||| | || | ||||| Sbjct 510353 GGCTAGCTCACAGCTGGCTTCCAGGGCTCCATAATAAATAGTTTCAAGGATTTATTTATT 510412 Query 71469 GAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAA 71528 | || || || || ||||| ||||| | | || ||||| | ||| | | Sbjct 510413 TAATAACTGGGCCTCTATACTCTCAAAAGGATATCTCATCAGGATAAAGGTATCTACCAG 510472 Query 71529 TCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAAT 71588 ||||| || ||||| || || ||||| || | ||||| || | | || ||||| | Sbjct 510473 CCCTTGTACTCCAATTCCAATGGGTCTATGGCATTTATTTGATAAATGTGCCTCTGGGAC 510532 Query 71589 AGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTATTACTTTGACCACATC 71648 |||||| | | ||||| ||||||||||| | ||||| ||| || ||||| || || Sbjct 510533 AGGATAGT---TTATATCGATAATTTTATTCAAATTTCGGACAATAGCTTTGGTGACTTC 510589 Query 71649 CTTTAGTTTGAGAAAATCAAATCTCCCATCTATT---ACAAACACGTTCAAGGCAACAGA 71705 | ||| ||| || || | ||| | ||| ||| |||| ||| | || Sbjct 510590 TGCCAATTTCTCAAAGTCGTATGTGTGTTCTGGTGTAACATACATATTCAGGGCCAGGGA 510649 Query 71706 TGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAG 71765 |||| |||||||| || |||||||| || ||||| | ||||| ||||| || Sbjct 510650 AGCCAAGTTACAAACTGCAACCTCATTTTTGCTGGTATATTCAACTATTTCTGTGCACAG 510709 Query 71766 ATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTT 71825 || || || ||||| ||||| | || || || || ||||| ||||| | ||| || Sbjct 510710 GTTGCTGCATTTGATTGTTCCCAGGTTCTGCTGGTTGCTCTTCCGATTACAGGAATCTTT 510769 Query 71826 ATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGA 71884 || || || || | ||||| | || ||||||| || | || | | ||| | | Sbjct 510770 GTAGAGCATGTACAGGGTACCCGGCTCTGTCTGAGACTCAGTGATGGTGTACCAAAGCTG 510829 Query 71885 CTCGAGCCTTTATTATATT-CTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGT 71943 || |||| |||| | || | || | || | |||| || | |||||| Sbjct 510830 CT-GAGCTTTTACAACTTTGCGAACATGACCTTGTT-TTTCATAACTTTCATATAACTTC 510887 Query 71944 TCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGAC 72003 || || || ||||||||| | | || | |||||||| ||||| ||||||| ||| ||| Sbjct 510888 TCAAATTCCTCTCCCCAAACCTCATCCAGGCCAGGACACTCATTTGGACACAGCAAAGAC 510947 Query 72004 CACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 72063 || || || | | |||||||||||| ||||||| |||||||||| || | || Sbjct 510948 CAGTCCTGATTAGTCTCTACTCGTTTCATGAAGAGATTCAGAATCCAAAGGGCAAAGAAA 511007 Query 72064 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 72123 |||| |||| | ||||| || |||||||| |||||||| | ||| || ||| | | Sbjct 511008 AGATTCCTGGCACGCTGCTCTTCTTTTCCTGTGTTCTTTTTTAAATCAAGAAACTCAAAG 511067 Query 72124 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCC 72183 || || ||||||| || |||| ||| || || | | || || | |||||||| || Sbjct 511068 ATGTCTAAATGCCAAGGCTCCAGGTAAATAGCAAATGCCCCAGGGCACTTGTTTCCACCT 511127 Query 72184 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 72243 ||||| | || | ||| ||||| ||||| ||||||| |||||| | || ||||| || Sbjct 511128 TGATCAACATAACGAGCTGTGTTGTTATACACTCTCAGCATTGGTACAAGGCCATTAGAA 511187 Query 72244 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCT 72303 ||||||||||| | || ||||| ||| | || | |||| || | | | ||| Sbjct 511188 TTGCCATTGGTCCCAGCTATGTAGCTGCCAGTAGCCCAAATACAACTCACAGTGACACCA 511247 Query 72304 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 72363 ||||| || || |||||| || ||||| || | || | || ||||| ||||| || Sbjct 511248 ATTCCTCCAGCGGATTTAGAAATCAATGCACACTGCTTCAGAGTGTCATAAATGCCTTCG 511307 Query 72364 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 72423 | || ||||| |||| | || || |||||||| || | ||| | | | || | Sbjct 511308 GTGCTGTCATCTTTCATACTCAGAAGGAAACAGCTTGAAAGTTGTGGGCAGTTGGTACTA 511367 Query 72424 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTC 72483 ||||| || | | |||||||| || |||||||| || | || || || ||||| || Sbjct 511368 GCATTGAAGAGAGAGGGAGAAGCATGAGTAAACCACTTCTGGGAAAGAAGGTTGTATGTT 511427 Query 72484 TCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGC 72543 ||||| || | ||||| || || || || || || | || | ||| ||||||||| Sbjct 511428 TCAATTGCAGCCTCTATGTCTTCTTTGTGAATCCCCACAGACACCCTCATCAACATATGC 511487 Query 72544 TGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTA 72603 || || |||||| | | || ||| || |||||||| ||||| | |||| ||| ||| Sbjct 511488 TGCGGCCTTTCAGCCACTTTTCCATTGATCTTCAACAAATAGGACCTCTCCAGAGTCTTA 511547 Query 72604 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCC 72663 || ||||| || || || || || |||| || || || || | ||||| || ||| Sbjct 511548 AAGCCAAAGTAATTATAAGAGAAATCTCAGTCATAGATGATGGCAGAATTCAGGCGATCT 511607 Query 72664 TTATATTTGTTAACTATATCCA-TGGTGATACTT-GAAATAATCGGAGAATGTTTCCCAT 72721 |||| ||| ||||||| || || |||| | | || ||||||||||| |||| Sbjct 511608 TTATGGGCCAAAACAATATCCAGTGTTG--ACTTGGCCACCATGGGAGAATGTTTGCCAT 511665 Query 72722 TTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTC 72761 | | ||||| | ||||||||| | |||||||| || || Sbjct 511666 TATGTGGATTTATATAGTTGAAGAGGTCCTCCATTACATC 511705 Score = 183 bits (202), Expect = 4e-41 Identities = 295/419 (70%), Gaps = 9/419 (2%) Strand=Plus/Plus Query 70836 TAGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAG 70895 || ||| ||||| || || || | | | || |||| | || || || |||| || || Sbjct 508949 TAAATAATACATCCCAGTCTTCAAATCCAGCTTCCAAGCATAGAAGTGTGTACTGGTGAG 509008 Query 70896 TTTGGAATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGC 70955 ||| ||| | || || || ||||| || |||| |||| || ||||| ||||| || Sbjct 509009 CTTGTG-TAGTTGGGCTCAGCAATGTGGATGTTCAAAAACTGGCTCTGATCAATGAAAGC 509067 Query 70956 TCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA 71015 || | || |||||||| || | || || || || | |||||||| | || ||||| Sbjct 509068 ACCACGATCAGCAGCCATCTTCAGGACAGTTTTCTGAGAGATTTCCCATACTGTCTTATA 509127 Query 71016 AACTCGCTTAATATCTTCTGGAAGGTTTG---TAT--TCTGAATGGATCCACCATCTGCA 71070 || | || | || || |||| ||| ||| |||| || || ||| ||| Sbjct 509128 AAGCTGGTTCAGGTCATCGGGAA--TTTCCACTATGCTCTGGATAGAGCCATTGCAGGCA 509185 Query 71071 ATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGA 71130 |||||| |||||| || |||||||||||||| | |||||| | | || | | || Sbjct 509186 ATAATCTGATTTTTCATTTCTTCATTCCATAAGCCCCGCTCGGTAAGATCTTTCAATAG- 509244 Query 71131 TGAGGATTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTA 71190 |||||||| || | ||||||||||| || || ||||| ||||||| || || |||||| Sbjct 509245 TGAGGATTTACAATCTGAAATTCTCCTGATAAGACTCTTAGAGTGTAGATGTTGCTGGTA 509304 Query 71191 TACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGG 71249 || ||||| | |||||||| |||| ||| || ||||||||||| ||||| | ||| || Sbjct 509305 TAAGGTTCAATAGACTCATTTTTTCTCAAGATCTGAGCAGTTGAAGCAGTAGTCATGGG 509363 >seq187 Length=5094135 Score = 224 bits (248), Expect = 1e-53 Identities = 519/777 (67%), Gaps = 9/777 (1%) Strand=Plus/Plus Query 41718 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 41774 ||||||||||| |||| ||| |||| ||| || || |||||||||||||| Sbjct 4782 TTTAAAAGTCAGCATCCCAAGTAAAAGAATTCTCCATAGGAATGGACATAACTCCCATAG 4841 Query 41775 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT- 41833 | || || ||||| || || || || || || ||||| |||||||| || |||||| Sbjct 4842 TCTGATACTCACCAACTATCTTCTCAAAGAAGTTTGTCTTCCCTTCCAAAGAAATATTTC 4901 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 || ||||| ||||| ||||| || ||| || | || || | ||| || Sbjct 4902 TCTATGAAGTCAAATGGATTTTCCACTCGGAAAACCTTGCTGAAGCCTAGTTCCAGCATG 4961 Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 41953 | || || || | || | || | |||||||| | | ||||| || ||| | Sbjct 4962 AGCCTGTCAGCCACAAACTTGATGCACTGTTTCATCAAATTGGAGTTCATCCCGATAGGC 5021 Query 41954 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 42013 || || || | || | || || || || || ||||| || |||| | | ||| Sbjct 5022 TTCACCGGCAAGCCCTCCGTGAGGAACTCCTGCTCAATGCCGATGGCGTTGATGACAATC 5081 Query 42014 GATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAA 42073 || || | | || ||| | || | || || ||||||| || |||| Sbjct 5082 TCCCTCACCCTCTGCTCCAACGGCTTGTGCACCAGGTGCTTGAACATCAGGCACACGAAG 5141 Query 42074 TCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATT 42133 || || ||| ||||| | ||| ||||| | |||||||||||| ||||| || ||||| Sbjct 5142 TCACAACGCAAGCCCTCGTATCTGCTAATGAGTTCGTTGGAAAAGGTGAGGCCAGGCATG 5201 Query 42134 AGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCT 42193 ||||| || || || ||||| || || ||||||| || ||||||||||| |||||||| Sbjct 5202 AGGCCCCGTTTCTTGAGCCAGAAGATCAACGCAAAAGAACCAGAAAAGAAAATTCCTTCC 5261 Query 42194 ACTGCCGCAAAGGCAATAA-GTCTCTCTCCATAACCGGCAC---TGTCATGTATCCACTT 42249 || | ||||||| | || | |||||||| ||| |||| |||||| Sbjct 5262 ACAGTGACAAAGGCCACCGTGTGT-TCTCCATATGTGGCCTCTTTGTCCCCTATCCAGCG 5320 Query 42250 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 42309 ||||| || |||||||| || ||||| | || || || ||||||| |||||| | Sbjct 5321 CAACGCCCAGTCTGCCTTCTTCTTCACACAGGCCACGGTCTCAGTGGCATTGAAGAGAAA 5380 Query 42310 GtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATG 42369 | |||| | |||| ||| || || || || | || | |||||||| ||||| Sbjct 5381 CTCCCTTTCTTGGGAATCTCTAATGTAAGTGTCCATAAGGAGTGTGTACATTTCCGAATG 5440 Query 42370 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTC 42429 | |||||| ||||| ||||| || ||||||||||| | ||| || |||| || ||||| Sbjct 5441 CAGGTTTTCCATGGCAATCTGGAAGCCGTAGAAACACCGGGCTTCTGTAATTTGAACTTC 5500 Query 42430 TGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAA 42486 | |||||| || | | ||| || | ||||| || || ||||| | |||||| Sbjct 5501 TTGGTTAAATCGCTCCACCAGATTCTCACTGACTATGCCATCGCTGGCAGGAAAAAA 5557 >seq206 Length=4534510 Score = 154 bits (170), Expect = 2e-32 Identities = 705/1099 (64%), Gaps = 28/1099 (3%) Strand=Plus/Plus Query 71374 GATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAAT 71433 || ||| |||| || || ||||| || | | | |||||| ||||| || || || || Sbjct 2975816 GAGCCTTCATAGGTTTCATATGGGCCATGCTCCTTGGCTAGATCACAGCTGGCTTCCAAG 2975875 Query 71434 GCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCA 71493 ||||||||||||| || | | || | ||||| | || | || || || ||| Sbjct 2975876 GCTCCATAATAAACAGTCACAATGATTTGGTTATTTCAAAACTGGGACTCTGGACTCTCA 2975935 Query 71494 AATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGT 71553 || | || | | || ||||| || |||| | | ||| || |||| | || || Sbjct 2975936 AAATGTTATCTCATCAGGATAAAAGCATCTGTGAGCCGTTGTACTCCAACTTCAATGGGG 2975995 Query 71554 CTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 71613 || ||||| || | | || |||| | ||| || || || || || |||||| Sbjct 2975996 AAATGATGTTTATTTGATAAGTGTGCCTCTGAGACAGGGTAGTATTTTATGTCAATAATT 2976055 Query 71614 TTATTGAGATTTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCT- 71672 ||||| |||||| ||| || ||| || || | | ||| | | ||| || | Sbjct 2976056 TTATTCAGATTTTGGACAATATCTTCCGTGACTTCTGTCAATTTCTCATAGTCATATGTG 2976115 Query 71673 --CCCATCTATTACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCA 71730 | || || ||| ||| |||| ||| | || |||| ||||||| || |||||| Sbjct 2976116 TTCTGATGTA--ACATACATATTCAGGGCCAGGGAAGCCAAGATACAAACTGCAACCTCA 2976173 Query 71731 T--TAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTA 71788 | | || || |||| || ||||| ||| || || || || ||||| ||||| | Sbjct 2976174 TCTTTGCT--GGTCTATTCTACCATTTCTGTGTGCAGGTTGCTGCATTTGATTGTTCCCA 2976231 Query 71789 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAG 71848 || | || || ||||| |||| | | || ||| || || || || || ||||| | Sbjct 2976232 GGTTCTTCTGGTTGCTCTTCCAGTTATAAGAATGCTTGTAGAGCATGAATGGGGTACCCG 2976291 Query 71849 TTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGT 71908 | | ||||||| || || || | | ||| | | || | ||| | | | Sbjct 2976292 TCTG--TCTGAGACTCAATGATGACATACCA-ATG-CTGCTGAATTTTCACAACTTTACG 2976347 Query 71909 ATCTCTT--TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATT 71966 | | | || | |||| || |||||| || || || ||||||||| | | Sbjct 2976348 AACACGACCTTGTTTTTCATAACTCTCATATAAGGTATCAAATTCCTCTCCCCAAACCTC 2976407 Query 71967 GTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTC-TCCATCATCATTTACTC 72025 ||| | |||||||| |||| | |||||||| || || || | || || | | || Sbjct 2976408 GTCCAGACCAGGACACCCATTTTG-CACATCAAAGATCAGTCCTGAATAGTCTCTGA-TC 2976465 Query 72026 GTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGG--TTCTATGCTC 72083 |||||| |||||||| |||||||| | || | || ||||| || | | || | ||| Sbjct 2976466 ATTTCATGAAGAGATCCAGAATCCAAGGTGCAAAGAAAAGATCCCTAGCATGCTGTTCTC 2976525 Query 72084 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 72143 | ||||||||||||||| | ||| || ||| | | || || ||||| | || Sbjct 2976526 CC--TTTCCTGTATTCTTT---AAATCAAGAAACTCAAGCATTTCTAAATGCTGAGCCTC 2976580 Query 72144 CAAGTATATGGC-CATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGG 72202 |||| | || | || || || | | || ||||| | |||| | || ||| | | Sbjct 2976581 CAAGGAAATAACAAATGAC-CCAAGGCACTTATTTCCACTTTGATGAACATAACTATCTG 2976639 Query 72203 TGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGA 72262 |||| ||||| ||||||| |||||| |||| |||||| || |||||||||| | | Sbjct 2976640 TGTTGTTATACACTCTCAGCATTGGTATAAGACCATT-AATATTCCATTGGTCCAAGCTA 2976698 Query 72263 TATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAG 72322 | |||| || | || |||| | || | | | ||| ||||| || || ||||| Sbjct 2976699 TGCAGCTATCAGTAGCCTGAATGTAACTCACAGCAACACCAATTCCACCAGCAGATTTAG 2976758 Query 72323 AGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGT 72382 | || ||||| | | || | || | || ||||| | || || ||||| |||| Sbjct 2976759 AAATCAATGCATACTGCTTCAGAGTGTAGTAAATGCCTTTGATGCTGTCATCTTTCATAA 2976818 Query 72383 TAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAG 72442 | || |||||| |||| || ||||| | | | || | | ||| || | || |||| Sbjct 2976819 TCAGAAGAAAAAAGCTTGAAATTTGTGGGCAGTTGGTATCAGAATTGAAGAGAGTGGGAG 2976878 Query 72443 AAGCGTGCGTAAACCATTT 72461 |||| || ||||| || || Sbjct 2976879 AAGCATGAGTAAAGCACTT 2976897 Score = 125 bits (138), Expect = 1e-23 Identities = 276/406 (68%), Gaps = 7/406 (2%) Strand=Plus/Plus Query 70868 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATAT 70927 |||| || || || |||||||| || || | | ||| | || || || ||||| || | Sbjct 2975273 TCCAACCATAGAAGTGCATACTGGTGAGCTCGCTATAATTGGGCTCAGCCATGTGGATGT 2975332 Query 70928 TCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 70987 ||| ||||| | ||||| | || || || || | |||||| || | || || | Sbjct 2975333 TCAAAGACTGGATCTGATCAACCAAAGCACCATGATCAGAAGCCATCTTGAGGACAGTTT 2975392 Query 70988 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTT-TGTA 71046 | || | |||||||| | ||||||| |||| | || || |||| | | || Sbjct 2975393 TCTGAGAGATTTCCCATCCGATCTTATAAAGCTGCTTCAGGTCATCAGGAATTTCCTCTA 2975452 Query 71047 T--TCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTCCATAATT 71104 | |||| || || ||| ||||||||| |||||| || ||| ||||||||| Sbjct 2975453 TGCTCTGGATAGAGCCATTGCAGGCAATAATCTGATTTTTCATTCCTTTATTCCATAAGC 2975512 Query 71105 TTCTCTCGGTTAAAACTCT-AAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAAT 71163 ||| | | | || | || ||| ||||||| || | | ||||||| | ||||| Sbjct 2975513 CCTGCTCCATAAGATCTTTCAATAAGA-GAGGATTTACAATCTTAAATTCTTCTGACAAG 2975571 Query 71164 ACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATT 71223 ||| | | |||||| || || |||||||| |||| | |||| |||||| ||||| || Sbjct 2975572 ACTTTTCAAGTGTAGATGTTGCTGGTATAAAGTTCAATAGACTTATTATTCCCCAAGATC 2975631 Query 71224 TGAGCAGTTGATGCAGTCGGCA-TAGGTGCCACCAATAGACTATTT 71268 ||||||||||| ||| | || | |||| || | | ||||||| || Sbjct 2975632 TGAGCAGTTGAAGCACTAGGAAGTAGG-GCAATAAGTAGACTACTT 2975676 >seq146 Length=7541600 Score = 131 bits (144), Expect = 2e-25 Identities = 110/135 (81%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 71143 ACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACT 71202 || ||||||||||| ||||| ||||| |||||||| || || |||||||| ||||| | Sbjct 3726378 ACCTGAAATTCTCCTGACAAGACTCTTCGAGTGTAGATGTTGCTGGTATAAGGTTCAATA 3726319 Query 71203 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGA 71262 ||||| ||||||||||| || ||||||||||| ||||| ||||| || || | | |||| Sbjct 3726318 GACTCGTTATTTCCCAAGATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAGA 3726259 Query 71263 CTATTTCTAAGACCA 71277 || ||||| | |||| Sbjct 3726258 CTGTTTCTTATACCA 3726244 Score = 104 bits (114), Expect = 3e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 72021 TACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATG 72080 |||||||||||| |||||||| ||||||||||| || | || |||||||||| | || Sbjct 3714760 TACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGATCTCTGGCACGCTG 3714701 Query 72081 CTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 72140 ||| || |||||||| ||||| || | ||| || ||| | | || || ||||||| || Sbjct 3714700 CTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCAAGG 3714641 Query 72141 TTCCAAGTATATGGC 72155 |||| ||| || || Sbjct 3714640 CTCCAGGTAAATAGC 3714626 Score = 96.9 bits (106), Expect = 5e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 71377 CCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCT 71436 ||| |||| || || ||||| || | | | |||||| ||||| || || || | ||| Sbjct 3721963 CCTTCATAGGTTTCATATGGGCCATGCTCCTTGGCTAGCTCACAGCTGGCTTCCAGGGCT 3721904 Query 71437 CCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAAT 71496 ||||||||||| ||||| || || | ||||| | || || || || || ||||| Sbjct 3721903 CCATAATAAATAGTTTCAAAGATTTGTTTATTTAATAACTGGGCCTCTGGACTCTCAAAA 3721844 Query 71497 GGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTG 71556 ||||| | | || ||||| || ||||| | ||||| || ||||| || || ||||| Sbjct 3721843 GGATATCTCATCAGGATAAAGGCATCTGCCAGCCCTTGTACTCCAATTCCAATGGGTCTA 3721784 Query 71557 TGTCTCTTATTAGAAATTTCAGCTTCTGGAATA 71589 || | ||||| || | | || | ||||||| Sbjct 3721783 TGGCGTTTATTTGATAAATGTGCCTTTGGAATA 3721751 >seq151 Length=7174217 Score = 120 bits (132), Expect = 4e-22 Identities = 99/121 (82%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 |||| ||||| ||||| | |||||||||||| ||||| || ||||| || || || || | Sbjct 1182556 CCTCGTCTCTGCTAATGAGTTCGTTGGAAAAGGTGAGGCCAGGCATGAGTCCTCGTTTCT 1182497 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | ||||| || || |||||||| || |||||||||||||| ||||| || || ||||||| Sbjct 1182496 TGAGCCAGAAGATTGACGCAAAAGAACCAGAAAAGAAGATGCCTTCCACAGCGGCAAAGG 1182437 Query 42207 C 42207 | Sbjct 1182436 C 1182436 Score = 91.5 bits (100), Expect = 2e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 42325 ATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGC 42384 |||||||| || || || || | ||||| |||||||| ||||| |||||||| || || Sbjct 1180952 ATCTTTAATGTAAGTGTCAATAAGCAGACTGTACATTTCCGAATGTATGTTTTCCATAGC 1180893 Query 42385 CATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTC 42444 ||||| || ||||||||||| | ||| || |||| || |||||| | |||||| || Sbjct 1180892 AATCTGGAAGCCGTAGAAACAACGGGCTTCTGTAATTTGAACTTCTTGGCTAAATCGCTC 1180833 >seq6919 Length=1122 Score = 87.8 bits (96), Expect = 2e-12 Identities = 103/139 (74%), Gaps = 3/139 (2%) Strand=Plus/Minus Query 41718 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 41774 |||| |||||| |||| |||| |||| ||| ||| | |||||||||||||| Sbjct 625 TTTAGAAGTCAGCATCCAAAGTAAAAGAATTCTCTGTGGGGCTGGACATAACTCCCATCC 566 Query 41775 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTT 41834 | || || || ||||| | || || || || || ||||| ||||||| || ||||| | Sbjct 565 TCTGATACTCGCCCACTCTCTTCTCAAAGAAGTTTGTCTTCCCTTCCAGAGAAATATTCT 506 Query 41835 CCATGAAATCAAACGGATT 41853 ||||||| ||||| ||||| Sbjct 505 CCATGAAGTCAAATGGATT 487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671079342772600