Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octodon_20degus_20[refseq_20GCF_5F000260255.1_202012-05-01] 7,135 sequences; 2,995,889,303 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq21 111 2e-19 seq203 109 6e-19 seq164 109 6e-19 seq146 100 3e-16 seq70 100 3e-16 seq29 100 3e-16 seq163 96.9 4e-15 seq10 95.1 1e-14 seq18 93.3 4e-14 seq50 91.5 1e-13 seq37 91.5 1e-13 seq110 89.7 5e-13 seq344 86.0 6e-12 seq19 86.0 6e-12 seq123 84.2 2e-11 seq79 82.4 8e-11 >seq21 Length=22121357 Score = 111 bits (122), Expect = 2e-19 Identities = 149/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 142981 ATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTCGAGTT 143039 ||||| ||||| || ||||| ||||||||||| || || | || | ||||| |||| Sbjct 9496168 ATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGACAAGGTACGTCCA-TCTTCCAGTT 9496110 Query 143040 GTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTT 143099 | ||||||||| ||||||| | ||||||||| ||||| || ||||| || || || | Sbjct 9496109 GCTTACCAGCAAAGATCAGCCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCT 9496050 Query 143100 TTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGG 143159 | |||| | ||| | ||||||| ||| || || |||| | | ||||| || | Sbjct 9496049 TGGCCTTTACATTTTCTATAGTGTCCGAGGGCTCAACCTCAAGCATGATGGTCTTCCCCG 9495990 Query 143160 TCAATGTTTTTACGAATATTTGCAT 143184 | || ||||| ||||| || ||||| Sbjct 9495989 TAAAGGTTTTCACGAAAATCTGCAT 9495965 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 142981 ATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTCGAGTT 143039 ||||| ||||| || ||||| ||||||||||| || || | || | ||||| |||| Sbjct 13639754 ATGAAGAGTAGACTCCTTTTGAATGTTGTAATCAGACAAGGTACGTCCA-TCTTCCAGTT 13639696 Query 143040 GTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTT 143099 | ||||||||| |||||| | ||||||||| ||| | || ||||| || || || | Sbjct 13639695 GCTTACCAGCAAAGATCAACCTTTGCTGATCAGGAAGAATTCCTTCCTTATCCTGGATCT 13639636 Query 143100 TTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGG 143159 | |||| | ||| ||||||| |||||| || || | || | ||||| || | Sbjct 13639635 TGGCCTTTACATTTTCTGTAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGTCTTCCCCG 13639576 Query 143160 TCAATGTTTTTACGAATATTTGCAT 143184 | | ||||| | ||| || ||||| Sbjct 13639575 TAAGGGTTTTCATGAAAATCTGCAT 13639551 >seq203 Length=4329578 Score = 109 bits (120), Expect = 6e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGT 143030 ||| || | ||||| ||||| || ||||| ||||||||||| || || | || | | Sbjct 2169449 CAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAATCAGACAAGGTACGTCCA-T 2169391 Query 143031 CTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGT 143090 |||| || || ||||||||| ||||||| | ||||||||| ||||| || ||||| || | Sbjct 2169390 CTTCCAGCTGCTTACCAGCAAAGATCAGCCTTTGCTGATCAGGAGGAATTCCTTCCTTAT 2169331 Query 143091 CGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCG 143150 | || || |||| | ||| | ||||||| |||||| || || | || | | Sbjct 2169330 CCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGG 2169271 Query 143151 TCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| || || | ||||| ||||| || ||||| Sbjct 2169270 TCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 2169237 >seq164 Length=5921534 Score = 109 bits (120), Expect = 6e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGT 143030 ||| || | ||||| ||||| || ||||| ||||||||||| || || | || | | Sbjct 5181237 CAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAATCAGACAAGGTACGTCCA-T 5181179 Query 143031 CTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGT 143090 |||| || || ||||||||| ||||||| | ||||||||| ||||| || ||||| || | Sbjct 5181178 CTTCCAGCTGCTTACCAGCAAAGATCAGCCTTTGCTGATCAGGAGGAATTCCTTCCTTAT 5181119 Query 143091 CGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCG 143150 | || || |||| | ||| | ||||||| |||||| || || | || | | Sbjct 5181118 CCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGG 5181059 Query 143151 TCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| || || | ||||| ||||| || ||||| Sbjct 5181058 TCTTCCCAGTAAGGGTTTTCACGAAAATCTGCAT 5181025 >seq146 Length=7541600 Score = 100 bits (110), Expect = 3e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGT 143030 ||| || | ||||| ||||| || ||||| ||||||||||| || | | || | | Sbjct 3493626 CAACACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGGCAAGTTCCGTCCA-T 3493568 Query 143031 CTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGT 143090 |||| ||||| ||||||||| ||||||| | ||||||||| ||||| || ||||| || | Sbjct 3493567 CTTCCAGTTGCTTACCAGCAAAGATCAGCCTTTGCTGATCAGGAGGAATTCCTTCCTTAT 3493508 Query 143091 CGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCG 143150 | || || |||| | ||| | ||||||| |||||| | || | || | | Sbjct 3493507 CCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCACCCTCGAGTGTGATGG 3493448 Query 143151 TCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| || | | ||||| ||||| || ||||| Sbjct 3493447 TCTTCCCCATAAGGGTTTTCACGAAAATCTGCAT 3493414 >seq70 Length=12294693 Score = 100 bits (110), Expect = 3e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGT 143030 ||| || | ||||| ||||| || ||||| ||||||||||| || || | || | | Sbjct 8652713 CAACACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGGCAAGGTCCGTCCA-T 8652771 Query 143031 CTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGT 143090 |||| ||||| ||||||||| ||||||| | ||||||||| ||||| || |||| || | Sbjct 8652772 CTTCCAGTTGCTTACCAGCAAAGATCAGCCTTTGCTGATCAGGAGGAATTCCTTTCTTAT 8652831 Query 143091 CGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCG 143150 | || || |||| | ||| | |||||| ||| || || || | || | | Sbjct 8652832 CCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCCAGGGCTCAACCTCGAGCGTGATGG 8652891 Query 143151 TCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| || || | ||||| ||||| || ||||| Sbjct 8652892 TCTTTCCTGTGAGGGTTTTCACGAAAATCTGCAT 8652925 >seq29 Length=19401444 Score = 100 bits (110), Expect = 3e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGT 143030 ||| || | || || ||||| || ||||| ||||||||||| || || | || | | Sbjct 6047436 CAACACAAGATTAAGAGTAGACTCCTTTTGAATGTTGTAATCAGACAAGGTACGTCCA-T 6047378 Query 143031 CTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGT 143090 |||| || || ||||||||| ||||||| | ||||||||| | ||| || ||||| || | Sbjct 6047377 CTTCCAGCTGCTTACCAGCAAAGATCAGCCTTTGCTGATCAGAAGGAATTCCTTCCTTAT 6047318 Query 143091 CGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCG 143150 | || || |||| | ||| | ||||||| |||||| || || | || | | Sbjct 6047317 CCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGG 6047258 Query 143151 TCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| || || | ||||| ||||| || ||||| Sbjct 6047257 TCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 6047224 >seq163 Length=6182668 Score = 96.9 bits (106), Expect = 4e-15 Identities = 151/214 (71%), Gaps = 9/214 (4%) Strand=Plus/Plus Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGT 143030 ||| || | ||||| ||||| || ||||| ||||||||||| || || | || | | Sbjct 5399910 CAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAATCAGACAAGGTACGTCCA-T 5399968 Query 143031 CTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGT 143090 |||| || || ||||||||| ||||||| | ||||||||| ||||| || ||||| || Sbjct 5399969 CTTCCAGCTGCTTACCAGCAAAGATCAGCCTTTGCTGATCAGGAGGAATTCCTTCCTT-- 5400026 Query 143091 CGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCG 143150 || | |||| | ||| | ||||||| |||||| || || | || | | Sbjct 5400027 -----ATCCTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGG 5400081 Query 143151 TCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| || || | ||||| ||||| || ||||| Sbjct 5400082 TCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 5400115 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/214 (70%), Gaps = 3/214 (1%) Strand=Plus/Plus Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGT 143030 ||| || | ||||| ||||| || ||||| ||||||||||| || |||| || | | Sbjct 896718 CAACACAAGATGAAGAGTAGACTCCTTTTGGATGTTGTAATCAGACAAAGTGCGTCCA-T 896776 Query 143031 CTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGT 143090 |||| ||| ||||||||| ||| ||| | ||||||||| ||||| || ||| | || | Sbjct 896777 CTTCCAGTCACTTACCAGCAAAGAGCAGCCTTTGCTGATCAGGAGGAATTCCTGCCTTAT 896836 Query 143091 CGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCG 143150 | | | || |||| | ||| ||||||| |||||| || || | || | | Sbjct 896837 C-CTGGATCTTGCCTTTATATTTTCTGTAGTGTCCGAGGGTTCAACCTCGAGTGTGATGG 896895 Query 143151 TCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| || | | ||||| ||||| || ||||| Sbjct 896896 TCTTCCCTGAAAGGGTTTTCACGAAAATCTGCAT 896929 >seq10 Length=29551940 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 ||||| || ||||| ||||||||||| || || | ||||| ||||| ||| || Sbjct 19430291 GTAGACTCCTTTTGAATGTTGTAATCAGGCAAGGTCCGGCCATCTTCCAGTTGCTTATCA 19430232 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 ||| ||||||| | |||||||| ||||| || ||||| ||||| || | ||| Sbjct 19430231 GCACAGATCAGCCTGTGCTGATCAGGAGGAATTCCTTCCTTGTCCTGGATCTCGGCCTTT 19430172 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | ||| | ||||||| |||||| || || | || | ||||| || || | ||| Sbjct 19430171 ACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGTCTTCCCCGTGAGGGTT 19430112 Query 143168 TTTACGAATATTTGCAT 143184 || ||||| || ||||| Sbjct 19430111 TTCACGAAAATCTGCAT 19430095 >seq18 Length=24717988 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/205 (72%), Gaps = 8/205 (4%) Strand=Plus/Plus Query 142981 ATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTCGAGTT 143039 ||||| ||||| || ||||| ||||||||||| || || | || | ||||| |||| Sbjct 15383489 ATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGACAAGGTACATCCA-TCTTCCAGTT 15383547 Query 143040 GTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTT 143099 | ||||||||| ||||||| | ||||||||| ||||| || ||||| || || | | Sbjct 15383548 GCTTACCAGCACAGATCAG-CTTTGCTGATCAGGAGGAATTCCTTCCTTATC-CTGGATC 15383605 Query 143100 TTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGG 143159 || |||| | ||| || |||||| |||||| || |||| || ||||| | Sbjct 15383606 TTGCCTTTACATTTTCTACAGTGTCCAAGGGTTCAACCTCAAGTGT----GTCTTCACCA 15383661 Query 143160 TCAATGTTTTTACGAATATTTGCAT 143184 | | ||||| ||||| || ||||| Sbjct 15383662 TAAGGGTTTTCACGAAAATCTGCAT 15383686 >seq50 Length=14205303 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/214 (71%), Gaps = 3/214 (1%) Strand=Plus/Minus Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGT-GCTCGAGT 143030 ||| || | ||||| ||||| || ||||| ||||||||||| || || | || | | Sbjct 12138216 CAACACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGACAAGGTAGGTCCA-T 12138158 Query 143031 CTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGT 143090 ||| ||||| ||||||||||||||||| | |||||||| ||||| || ||||| |||| Sbjct 12138157 CTTGCAGTTGCTTACCAGCATAGATCAGCCTGTGCTGATCAGGAGGAAT-CCTTCCTTGT 12138099 Query 143091 CGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCG 143150 | || || | || | ||| ||||||| |||||| | || | || | | Sbjct 12138098 CCTGGATCTTGGCCTGTACATTTTCTGTAGTGTCCGAGGGTTCAGCCTCGAGCGTGATGG 12138039 Query 143151 TCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| || || | ||||| | ||| || ||||| Sbjct 12138038 TCTTCCCCGTAAGGGTTTTCATGAAAATCTGCAT 12138005 Score = 82.4 bits (90), Expect = 8e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGT 143030 ||| || | ||||| ||||| || ||||| ||||||||||| || || | || | | Sbjct 11309719 CAACACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGACAAGGTACATCCA-T 11309661 Query 143031 CTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGT 143090 ||| ||| | ||||||||| ||||||| | |||||||| ||||| || ||||| |||| Sbjct 11309660 CTTGCAGTAGCTTACCAGCAAAGATCAGCCTGTGCTGATCAGGAGGAATTCCTTCCTTGT 11309601 Query 143091 CGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCG 143150 | || || | || | ||| | ||||| |||||| | || | || | | Sbjct 11309600 CCTGCATCTTGGCCTGTACATTTTCTGTAGGGTCCGAGGGTTCAGCCTCGAGCGTGATGG 11309541 Query 143151 TCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| || | | ||||| ||||| || ||||| Sbjct 11309540 TCTTCCCCATAAGGGTTTTCACGAAAATCTGCAT 11309507 >seq37 Length=17079334 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGT 143030 ||| || | ||||| ||||| || ||||| ||||||||||| | | | || | | Sbjct 9326188 CAACACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGACGAGATCCATCCA-T 9326130 Query 143031 CTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGT 143090 |||| ||||| ||||||||| ||||||| | ||||||||| ||||| || ||||| |||| Sbjct 9326129 CTTCCAGTTGCTTACCAGCAAAGATCAGCCTTTGCTGATCAGGAGGAATTCCTTCCTTGT 9326070 Query 143091 CGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCG 143150 | || || | || | ||| | |||||| |||||| || |||| | | | Sbjct 9326069 CCTGGATCTTGGCCTGTACATTTTCTATAGTGTCCAAGGGTTCAACCTCAAGCATGATGG 9326010 Query 143151 TCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| || | | ||||| | ||| || ||||| Sbjct 9326009 TCTTCCCCATAAGGGTTTTCATGAAAATGTGCAT 9325976 >seq110 Length=10499811 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/206 (70%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 142980 AATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTCGAGT 143038 |||||| ||| |||| ||||| ||||||||||| || || | || | || || ||| Sbjct 303226 AATGAAGGGTACATTCCTTTTGAATGTTGTAATCAGACAAGGTACGTCCA-TCCTCCAGT 303284 Query 143039 TGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATT 143098 || ||||||||| ||||||| | ||||||||| || || || || || || || || Sbjct 303285 TGCTTACCAGCAAAGATCAGCCTTTGCTGATCAGGGGGAATTCCCTCCTTATCCTGGATC 303344 Query 143099 TTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCG 143158 || |||| | ||| || ||||||| |||||| || | | || | ||||| | Sbjct 303345 TTGACCTTTACATTTTCTACAGTGTCCGAGGGTTCAACCTGGAGGGTGATGGTCTTCCTC 303404 Query 143159 GTCAATGTTTTTACGAATATTTGCAT 143184 | | ||||| ||||| || ||||| Sbjct 303405 ATAAGGGTTTTCACGAAAATCTGCAT 303430 >seq344 Length=1057235 Score = 86.0 bits (94), Expect = 6e-12 Identities = 93/121 (77%), Gaps = 2/121 (2%) Strand=Plus/Minus Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGT 143030 ||| || | ||||| ||||| || || || ||||||||||| || || | || | | Sbjct 729036 CAACACAAGATGAAGGGTAGACTCCTTGTGAATGTTGTAATCAGACAAGGTACGTCCA-T 728978 Query 143031 CTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGT 143090 |||| ||||| ||||||||| ||||||| | ||||||||| ||||| || ||||| || | Sbjct 728977 CTTCCAGTTGCTTACCAGCAAAGATCAGCCTTTGCTGATCAGGAGGAATTCCTTCCTTAT 728918 Query 143091 C 143091 | Sbjct 728917 C 728917 >seq19 Length=25147210 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGT 143030 ||| || | ||||| ||||| || ||||| ||||||||||| || || | || | | Sbjct 17501606 CAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAATCAGACAAGGTCCGTCCA-T 17501548 Query 143031 CTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGT 143090 |||| ||||| ||||||||| ||||||| | || |||||| ||||| || ||||| || | Sbjct 17501547 CTTCCAGTTGCTTACCAGCAAAGATCAGCCTTTACTGATCAGGAGGAATTCCTTCCTTAT 17501488 Query 143091 CGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCG 143150 | || || | || | ||| | |||||| |||||| || || | | | | Sbjct 17501487 CCTGGATCTTGGCCTGTACATTTTCTATAGTGTCCAAGGGTTCAACCTCGAGCATGATGG 17501428 Query 143151 TCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| || | | ||||| || || || ||||| Sbjct 17501427 TCTTCCCCATAAGGGTTTTCACAAAAATCTGCAT 17501394 >seq123 Length=8290776 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/213 (69%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTC 143031 ||| || | ||||| ||||| || ||||| ||||||||||| || || | || Sbjct 4122352 CAACACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGACAAGGTCCGGCCATC 4122293 Query 143032 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 143091 ||| || || ||||||||| ||||||| | ||||||||| |||| || ||||| || || Sbjct 4122292 TTCCAGCTGCTTACCAGCACAGATCAG-CTTTGCTGATCACGAGGAATTCCTTCCTTATC 4122234 Query 143092 GGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGT 143151 || || |||| | ||| | ||||| | |||||| || | | || | || Sbjct 4122233 CTGGATCTTGGCCTTTACATTTTCTATAGTGTCTGAGGGTTCAACCTTGAGCGTGATGGT 4122174 Query 143152 CTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||| || | | ||||| ||||| || ||||| Sbjct 4122173 CTTCCCCGGAAGGGTTTTCACGAAAATCTGCAT 4122141 >seq79 Length=11620627 Score = 82.4 bits (90), Expect = 8e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGT 143030 ||| || | ||||| ||||| || ||||| ||||||||||| || || | || | | Sbjct 6673225 CAACACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGACAAGGTACGTCCA-T 6673283 Query 143031 CTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGT 143090 |||| |||| |||||| || ||||||| | ||||||||| ||||| || ||||| || | Sbjct 6673284 CTTCCCGTTGCTTACCACCACAGATCAGCCTTTGCTGATCAGGAGGAATTCCTTCCTTAT 6673343 Query 143091 CGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCG 143150 | || || |||| | ||| | ||||| | ||| | || || | || | | Sbjct 6673344 CCTGGATCTTGGCCTTTACATTTTCTATAGTGTCTGAGGGCTGAACCTCCAGTGTGATGG 6673403 Query 143151 TCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| || || | ||||| || || || | ||| Sbjct 6673404 TCTTCCCCGTAAGGGTTTTCACAAAAATCTCCAT 6673437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506969180653200