Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octodon_20degus_20[refseq_20GCF_5F000260255.1_202012-05-01] 7,135 sequences; 2,995,889,303 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq288 455 4e-123 seq187 250 3e-61 seq206 190 3e-43 seq146 125 9e-24 seq64 123 3e-23 seq151 120 4e-22 seq6919 82.4 1e-10 >seq288 Length=2168581 Score = 455 bits (504), Expect = 4e-123 Identities = 944/1395 (68%), Gaps = 20/1395 (1%) Strand=Plus/Plus Query 62571 CCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCA 62630 ||| |||| | || ||||| || || || ||||| ||||| || || || | || Sbjct 510321 CCTTCATAGATTTCATATGGGCCAAGCTCCTTGGCTAGCTCACAGCTGGCTTCCAGGGCT 510380 Query 62631 CCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAAT 62690 || |||||||| ||||| | ||| | ||||||| || || || | || ||||| Sbjct 510381 CCATAATAAATAGTTTCAAGGATTTATTTATTTAATAACTGGGCCTCTATACTCTCAAAA 510440 Query 62691 GGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTA 62750 ||||| | | || ||||| | || | | ||||| || ||||| || || |||||| Sbjct 510441 GGATATCTCATCAGGATAAAGGTATCTACCAGCCCTTGTACTCCAATTCCAATGGGTCTA 510500 Query 62751 TGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTA 62810 || | ||||| || | | || ||||| | |||||| | | ||||| ||||||||| Sbjct 510501 TGGCATTTATTTGATAAATGTGCCTCTGGGACAGGATAGT---TTATATCGATAATTTTA 510557 Query 62811 TTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCA 62870 || | ||||| |||||| ||||| || || || ||| ||| || || Sbjct 510558 TTCAAATTTCGGACAATAGCTTTGGTGACTTCTGCCAATTTCTCAAAGTCGTATGTGTGT 510617 Query 62871 TCTATT---ACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTA 62927 ||| | ||| |||| |||| ||| | || |||| |||||||| || |||||||| Sbjct 510618 TCTGGTGTAACATACATATTCAGGGCCAGGGAAGCCAAGTTACAAACTGCAACCTCATTT 510677 Query 62928 GCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTT 62987 | ||||| | ||| || ||||| || || || || ||||| ||||| | || Sbjct 510678 TTGCTGGTATATTCAACTATTTCTGTGCACAGGTTGCTGCATTTGATTGTTCCCAGGTTC 510737 Query 62988 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCA 63047 || || || ||||| ||||| | ||| || || || ||| | | ||||| | || Sbjct 510738 TGCTGGTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACAGGGTACCCGGCTCT 510797 Query 63048 ATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGATTTGT---- 63102 ||||||| || | || | | ||| | | || |||| |||| | |||| Sbjct 510798 GTCTGAGACTCAGTGATGGTGTACCAAAGCTGCT-GAGCTTTTACAAC---TTTGCGAAC 510853 Query 63103 ATCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGT 63162 || |||| | |||| || | ||| || || || || ||||||||||| | | Sbjct 510854 ATGACCTTGTT-TTTCATAACTTTCATATAACTTCTCAAATTCCTCTCCCCAAACCTCAT 510912 Query 63163 CCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63222 ||| |||||||| |||| ||||||| ||| ||||| || | | || ||||||| Sbjct 510913 CCAGGCCAGGACACTCATTTGGACACAGCAAAGACCAGTCCTGATTAGTCTCTACTCGTT 510972 Query 63223 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGT 63282 |||| ||||||| |||||||||| || | || |||| |||| | || || || | Sbjct 510973 TCATGAAGAGATTCAGAATCCAAAGGGCAAAGAAAAGATTCCTGGCACGCTGCTCTTCTT 511032 Query 63283 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 63342 ||||||| |||||||| | ||| || ||| | | || || ||||||| || |||| || Sbjct 511033 TTCCTGTGTTCTTTTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCAAGGCTCCAGGT 511092 Query 63343 ATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 63402 | || || | | ||||| | |||||||| || ||||| | || | ||| ||||| | Sbjct 511093 AAATAGCAAATGCCCCAGGGCACTTGTTTCCACCTTGATCAACATAACGAGCTGTGTTGT 511152 Query 63403 TATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGC 63462 |||| ||||||| |||||| | || || || || | |||||||| || | || |||| Sbjct 511153 TATACACTCTCAGCATTGGTACAAGGCCATTAGAATTGCCATTGGTCCCAGCTATGTAGC 511212 Query 63463 TTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63522 | ||| | || | |||| ||| | | | ||| ||||| || || |||||| || | Sbjct 511213 TGCCAGTAGCCCAAATACAACTCACAGTGACACCAATTCCTCCAGCGGATTTAGAAATCA 511272 Query 63523 ATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTA 63582 |||| || | || | |||||||| || || || |||| ||||| |||| | || | Sbjct 511273 ATGCACACTGCTTCAGAGTGTCATAAATGCCTTCGGTGCTGTCATCTTTCATACTCAGAA 511332 Query 63583 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63642 | |||||||| || | ||| | | | || | ||||| || | | |||||||| | Sbjct 511333 GGAAACAGCTTGAAAGTTGTGGGCAGTTGGTACTAGCATTGAAGAGAGAGGGAGAAGCAT 511392 Query 63643 GCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATT 63702 | |||||||| || | ||||| || ||||| || ||||| || | ||||| || || Sbjct 511393 GAGTAAACCACTTCTGGGAAAGAAGGTTGTATGTTTCAATTGCAGCCTCTATGTCTTCTT 511452 Query 63703 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGT 63762 ||||| || || | || | ||| ||||| ||||| || |||||| | | || | Sbjct 511453 TGTGAATCCCCACAGACACCCTCATCAACATATGCTGCGGCCTTTCAGCCACTTTTCCAT 511512 Query 63763 TTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 63822 | || |||||||| ||||| | |||| ||| ||||| ||||| || || || || || | Sbjct 511513 TGATCTTCAACAAATAGGACCTCTCCAGAGTCTTAAAGCCAAAGTAATTATAAGAGAAAT 511572 Query 63823 CTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCA-TG 63881 ||| || || || || | || || || ||| |||| ||| ||||||| || Sbjct 511573 CTCAGTCATAGATGATGGCAGAATTCAGGCGATCTTTATGGGCCAAAACAATATCCAGTG 511632 Query 63882 GTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAA 63940 || |||| | | || ||||||||||| ||||| | ||||| | ||||||||| | Sbjct 511633 TTG--ACTTGGCCACCATGGGAGAATGTTTGCCATTATGTGGATTTATATAGTTGAAGAG 511690 Query 63941 ATCCTCCATCACTTC 63955 |||||||| || || Sbjct 511691 GTCCTCCATTACATC 511705 Score = 161 bits (178), Expect = 1e-34 Identities = 297/430 (69%), Gaps = 9/430 (2%) Strand=Plus/Plus Query 62019 GGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGC 62078 ||| | || | || ||| ||||| || || || | | | || |||| | || || || Sbjct 508938 GGTCTTGTCCTTAAATAATACATCCCAGTCTTCAAATCCAGCTTCCAAGCATAGAAGTGT 508997 Query 62079 ATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGA 62138 |||| || || ||| || | || || || || ||||| |||| | | || || ||| Sbjct 508998 GTACTGGTGAGCTTGTG-TAGTTGGGCTCAGCAATGTGGATGTTCAAAAACTGGCTCTGA 509056 Query 62139 TCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAA 62198 || ||||| || || | || |||||||| || | || || || || | |||||||| Sbjct 509057 TCAATGAAAGCACCACGATCAGCAGCCATCTTCAGGACAGTTTTCTGAGAGATTTCCCAT 509116 Query 62199 ATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TAT--TCTGAATGGATC 62253 | || ||||||| | || | || || |||| ||| ||| |||| || || | Sbjct 509117 ACTGTCTTATAAAGCTGGTTCAGGTCATCGGGAA--TTTCCACTATGCTCTGGATAGAGC 509174 Query 62254 CACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAA 62313 || || |||||| ||| || || || ||||||||||| | |||||| | | Sbjct 509175 CATTGCAGGCAATAATCTGATTTTTCATTTCTTCATTCCATAAGCCCCGCTCGGTAAGAT 509234 Query 62314 CTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAA 62373 || | | || || ||||| || | ||||||||||| || || ||||| ||||||| | Sbjct 509235 CTTTCAATAG-TGAGGATTTACAATCTGAAATTCTCCTGATAAGACTCTTAGAGTGTAGA 509293 Query 62374 TATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAG 62433 | || |||||||| ||||| | |||||||| |||| ||| || ||||||||||| |||| Sbjct 509294 TGTTGCTGGTATAAGGTTCAATAGACTCATTTTTTCTCAAGATCTGAGCAGTTGAAGCAG 509353 Query 62434 TCGGCATAGG 62443 | | ||| || Sbjct 509354 TAGTCATGGG 509363 >seq187 Length=5094135 Score = 250 bits (276), Expect = 3e-61 Identities = 605/913 (66%), Gaps = 25/913 (3%) Strand=Plus/Plus Query 32957 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTT 33013 ||||||||||| |||| ||| |||| ||| || || |||||||||||||| Sbjct 4782 TTTAAAAGTCAGCATCCCAAGTAAAAGAATTCTCCATAGGAATGGACATAACTCCCATAG 4841 Query 33014 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT- 33072 | || || ||||| || || || || || || || || |||||||| || |||||| Sbjct 4842 TCTGATACTCACCAACTATCTTCTCAAAGAAGTTTGTCTTCCCTTCCAAAGAAATATTTC 4901 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 || ||||| ||||| ||||| || ||| || | || || | ||| || Sbjct 4902 TCTATGAAGTCAAATGGATTTTCCACTCGGAAAACCTTGCTGAAGCCTAGTTCCAGCATG 4961 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192 | || || || || || | || | |||||||| | | ||||| || ||| | Sbjct 4962 AGCCTGTCAGCCACAAACTTGATGCACTGTTTCATCAAATTGGAGTTCATCCCGATAGGC 5021 Query 33193 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 33252 || || || | || | || || || || || |||||| | || | | | ||| Sbjct 5022 TTCACCGGCAAGCCCTCCGTGAGGAACTCCTGCTCAATGCCGATGGCGTTGATGACAATC 5081 Query 33253 GATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAA 33312 || || | | || ||| |||| | || || ||||||| || |||| Sbjct 5082 TCCCTCACCCTCTGCTCCAACGGCTTGTGCACCAGGTGCTTGAACATCAGGCACACGAAG 5141 Query 33313 TCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATT 33372 || || ||| ||||||| ||| ||||| |||||||||||||| ||||| || ||||| Sbjct 5142 TCACAACGCAAGCCCTCGTATCTGCTAATGAGTTCGTTGGAAAAGGTGAGGCCAGGCATG 5201 Query 33373 AGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCT 33432 ||||| || || || ||||| || || | || || || ||||||||||| |||||||| Sbjct 5202 AGGCCCCGTTTCTTGAGCCAGAAGATCAACGCAAAAGAACCAGAAAAGAAAATTCCTTCC 5261 Query 33433 ACTGCAGCAAAGGCAATAA-GTCTCTCTCCATAACCGGCGC---TGTCATGTATCCACTT 33488 || | ||||||| | || | |||||||| ||| |||| |||||| Sbjct 5262 ACAGTGACAAAGGCCACCGTGTGT-TCTCCATATGTGGCCTCTTTGTCCCCTATCCAGCG 5320 Query 33489 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 33548 ||||| || |||||||| || ||||| | || || || ||||||| |||||| | Sbjct 5321 CAACGCCCAGTCTGCCTTCTTCTTCACACAGGCCACGGTCTCAGTGGCATTGAAGAGAAA 5380 Query 33549 GtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATG 33608 | |||| | |||| ||| ||||| || || | || | |||||||||||||| Sbjct 5381 CTCCCTTTCTTGGGAATCTCTAATGTAAGTGTCCATAAGGAGTGTGTACATTTCCGAATG 5440 Query 33609 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTC 33668 | |||||| ||||| ||||| || ||||||||||| | || || ||||| || ||||| Sbjct 5441 CAGGTTTTCCATGGCAATCTGGAAGCCGTAGAAACACCGGGCTTCTGTAATTTGAACTTC 5500 Query 33669 TGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA---- 33724 | |||||| ||| ||| ||| ||| | ||||| || || ||||| | ||||| Sbjct 5501 TTGGTTAAATCGCTCCACCAGATTCTCACTGACTATGCCATCGCTGGCAGGAAAAAAAAA 5560 Query 33725 -ACGCCAATACA-----------TGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTAT 33772 | |||| | ||| |||||| ||| | || || | | || | Sbjct 5561 TATAATAATAAAAAGTTAGAATGTGTGATATAAAGTATCTCTCTTCAGCCTTCAGGGCTT 5620 Query 33773 TCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTG 33832 ||| | | || ||||| || | ||| ||||| ||| |||||||||| || ||||| | Sbjct 5621 CCCAGTGCTGAATGTCTTTGGAAAGATCGACTTCCTCCGCTGTCCAAAAAGAAGCCTCGG 5680 Query 33833 CCTTTTTATACAT 33845 | || ||| |||| Sbjct 5681 CTTTCTTACACAT 5693 >seq206 Length=4534510 Score = 190 bits (210), Expect = 3e-43 Identities = 719/1106 (65%), Gaps = 24/1106 (2%) Strand=Plus/Plus Query 62568 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 62627 || ||| |||| || || ||||| || | || || ||||| ||||| || || || || Sbjct 2975816 GAGCCTTCATAGGTTTCATATGGGCCATGCTCCTTGGCTAGATCACAGCTGGCTTCCAAG 2975875 Query 62628 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 62687 || || ||||||| || | | ||| | |||||| | || | || | || ||| Sbjct 2975876 GCTCCATAATAAACAGTCACAATGATTTGGTTATTTCAAAACTGGGACTCTGGACTCTCA 2975935 Query 62688 AATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGT 62747 || | || | | || ||||| || || | | | ||| || |||| | || || Sbjct 2975936 AAATGTTATCTCATCAGGATAAAAGCATCTGTGAGCCGTTGTACTCCAACTTCAATGGGG 2975995 Query 62748 CTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 62807 ||| ||||| || | | || |||| | ||| || || || || || |||||| Sbjct 2975996 AAATGATGTTTATTTGATAAGTGTGCCTCTGAGACAGGGTAGTATTTTATGTCAATAATT 2976055 Query 62808 TTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATC-G 62866 ||||| |||||| |||||| ||| || || ||| ||| | | ||| || | Sbjct 2976056 TTATTCAGATTTTGGACAATATCTTCCGTGACTTCTGTCAATTTCTCATAGTCATATGTG 2976115 Query 62867 CCCATCTATTACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCAT- 62925 | | | ||| |||| |||| ||| | || |||| ||||||| || ||||||| Sbjct 2976116 TTCTGATGTAACATACATATTCAGGGCCAGGGAAGCCAAGATACAAACTGCAACCTCATC 2976175 Query 62926 -TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAA 62984 | || | |||| || || || ||| || || || || ||||| ||||| | Sbjct 2976176 TTTGCTG--GTCTATTCTACCATTTCTGTGTGCAGGTTGCTGCATTTGATTGTTCCCAGG 2976233 Query 62985 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTT 63044 || | || || ||||| |||| | | || ||| || || |||||||| ||||| || Sbjct 2976234 TTCTTCTGGTTGCTCTTCCAGTTATAAGAATGCTTGTAGAGCATGAATGGGGTACCCGTC 2976293 Query 63045 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGT-A 63103 | ||||||| || || || | | ||| | | || | ||| | | | ||| | Sbjct 2976294 TG--TCTGAGACTCAATGATGACATACCA-ATG-CTGCTGAATTT-TCACAACTTTACGA 2976348 Query 63104 TCTC--CTTTCTCTTTCGTATAGTGT-ATACAATCGTTCGAACTCGTCTCCCCAAACATT 63160 | | | || | |||| || | | | ||| || || || || ||||||||||| | Sbjct 2976349 ACACGACCTTGTTTTTCATA-ACTCTCATATAAGGTATCAAATTCCTCTCCCCAAACCTC 2976407 Query 63161 GTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTC-TCCGTCATCCTTCACTC 63219 ||||| |||||||| ||| | |||||||| || || || | | || | | || Sbjct 2976408 GTCCAGACCAGGACACCCATTTTG-CACATCAAAGATCAGTCCTGAATAGTCTCTGA-TC 2976465 Query 63220 GTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCT 63279 |||||| |||||||| |||||||| | || | || ||||| || | ||||| Sbjct 2976466 ATTTCATGAAGAGATCCAGAATCCAAGGTGCAAAGAAAAGATCCCTAGCATGCTGTTCTC 2976525 Query 63280 CGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCA 63339 | ||||||||||||||| | ||| || ||| | | || || ||||| | |||| Sbjct 2976526 CCTTTCCTGTATTCTTT---AAATCAAGAAACTCAAGCATTTCTAAATGCTGAGCCTCCA 2976582 Query 63340 AGTATATGGC-CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 63398 || | || | || || ||| | | || ||||| | |||| | || ||| | ||| Sbjct 2976583 AGGAAATAACAAATGAC-CCAAGGCACTTATTTCCACTTTGATGAACATAACTATCTGTG 2976641 Query 63399 TTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATA 63458 || ||||| ||||||| |||||| |||| ||| || |||| |||||||| | | || Sbjct 2976642 TTGTTATACACTCTCAGCATTGGTATAAGACC-ATTAATATTCCATTGGTCCAAGCTATG 2976700 Query 63459 TAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAG 63518 |||| || | || |||| | ||| | | | ||| ||||| || || |||||| Sbjct 2976701 CAGCTATCAGTAGCCTGAATGTAACTCACAGCAACACCAATTCCACCAGCAGATTTAGAA 2976760 Query 63519 ATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTA 63578 || ||||| | | || | |||| || || || | ||||| ||||| |||| | Sbjct 2976761 ATCAATGCATACTGCTTCAGAGTGTAGTAAATGCCTTTGATGCTGTCATCTTTCATAATC 2976820 Query 63579 AGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAA 63638 || |||||| |||| || ||||| | | | || | | ||| || | || |||||| Sbjct 2976821 AGAAGAAAAAAGCTTGAAATTTGTGGGCAGTTGGTATCAGAATTGAAGAGAGTGGGAGAA 2976880 Query 63639 GCGTGCGTAAACCATTTTTCAGAAAG 63664 || || ||||| || || | | |||| Sbjct 2976881 GCATGAGTAAAGCACTTATTAAAAAG 2976906 Score = 109 bits (120), Expect = 7e-19 Identities = 252/375 (67%), Gaps = 5/375 (1%) Strand=Plus/Plus Query 62062 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62121 |||| || || || |||||||| || || | | |||| | || || || || ||||| | Sbjct 2975273 TCCAACCATAGAAGTGCATACTGGTGAGCTCGCTATAATTGGGCTCAGCCATGTGGATGT 2975332 Query 62122 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62181 ||| ||| || | ||||| | || || || || | |||||| || | || || | Sbjct 2975333 TCAAAGACTGGATCTGATCAACCAAAGCACCATGATCAGAAGCCATCTTGAGGACAGTTT 2975392 Query 62182 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTT-TGTA 62240 | || | |||||||| | ||||||| |||| | || || |||| | | || Sbjct 2975393 TCTGAGAGATTTCCCATCCGATCTTATAAAGCTGCTTCAGGTCATCAGGAATTTCCTCTA 2975452 Query 62241 T--TCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATT 62298 | |||| || || ||| || |||||| ||| || || | | ||||||||| Sbjct 2975453 TGCTCTGGATAGAGCCATTGCAGGCAATAATCTGATTTTTCATTCCTTTATTCCATAAGC 2975512 Query 62299 TTCTCTCGGTTAAAACTCT-AAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAAT 62357 ||| | | | || | || ||| | ||||| || | | ||||||| | ||||| Sbjct 2975513 CCTGCTCCATAAGATCTTTCAATAAGA-GAGGATTTACAATCTTAAATTCTTCTGACAAG 2975571 Query 62358 ACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATT 62417 ||| | | |||||| || || |||||||| |||| | |||| |||||| ||||| || Sbjct 2975572 ACTTTTCAAGTGTAGATGTTGCTGGTATAAAGTTCAATAGACTTATTATTCCCCAAGATC 2975631 Query 62418 TGAGCAGTTGATGCA 62432 ||||||||||| ||| Sbjct 2975632 TGAGCAGTTGAAGCA 2975646 >seq146 Length=7541600 Score = 125 bits (138), Expect = 9e-24 Identities = 108/134 (81%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 62337 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62396 || ||||||||||| ||||| ||||| |||||||| || || |||||||| ||||| | Sbjct 3726378 ACCTGAAATTCTCCTGACAAGACTCTTCGAGTGTAGATGTTGCTGGTATAAGGTTCAATA 3726319 Query 62397 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62456 ||||| ||||||||||| || ||||||||||| ||||| ||||| || || | | || | Sbjct 3726318 GACTCGTTATTTCCCAAGATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAGA 3726259 Query 62457 CTATTTCTAAGACC 62470 || ||||| | ||| Sbjct 3726258 CTGTTTCTTATACC 3726245 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 63216 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGT 63275 ||||||||||| |||||||| ||||||||||| || | || |||||||||| | || Sbjct 3714759 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGATCTCTGGCACGCTGC 3714700 Query 63276 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 63335 || || |||||||| ||||| || | ||| || ||| | | || || ||||||| || Sbjct 3714699 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCAAGGC 3714640 Query 63336 TCCAAGTATATGGC 63349 |||| ||| || || Sbjct 3714639 TCCAGGTAAATAGC 3714626 >seq64 Length=12756018 Score = 123 bits (136), Expect = 3e-23 Identities = 217/315 (69%), Gaps = 1/315 (0%) Strand=Plus/Minus Query 33565 TCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 33624 ||| | | ||| ||||| || | | || ||||| || || |||| || || ||| Sbjct 2273454 TCTCTGATATAGGTATCTATGAGCAAGCTGTACATCTCTGAGTGAACATTCTCGATGAGG 2273395 Query 33625 ATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCC 33684 ||||| || |||||||| || | ||||| | | ||| || || | || || ||| Sbjct 2273394 ATCTGGAAGCCGTAGAAGCAGCGGGCCTCAGGGACCTGCACCTCCTGGCTGAAGCGCTCC 2273335 Query 33685 GCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA-ACGCCAATACATGTTTTAT 33743 |||| |||||||| || ||||| ||| | |||||||||| | || || || || || Sbjct 2273334 ACCAAGTTTTCATTTACAATTCCATCATTTGCTGCAAAAAGAGGCTAAGACGTGAGAAAT 2273275 Query 33744 AAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTAC 33803 ||| ||||| || || || | || |||| ||| | | | ||| || |||| ||| || Sbjct 2273274 AAAGTATTTCTCATCCGGCTTGAGCTTATGCCAGTGAGGCAGATCCTTTGATAGATCAAC 2273215 Query 33804 TTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATA 33863 || || | ||||| || |||| || ||| || ||||| ||||||||||| || Sbjct 2273214 CTCCTCTGCCGTCCAGAAGGATGTCTGCACCTGCTTGTACATCTTCCAGATGTCGGGGTA 2273155 Query 33864 TTGGATTGGGAAAAT 33878 ||||| ||||| || Sbjct 2273154 CTGGATGGGGAAGAT 2273140 >seq151 Length=7174217 Score = 120 bits (132), Expect = 4e-22 Identities = 99/121 (82%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||||||||| ||||| |||||||||||||| ||||| || ||||| || || || || | Sbjct 1182556 CCTCGTCTCTGCTAATGAGTTCGTTGGAAAAGGTGAGGCCAGGCATGAGTCCTCGTTTCT 1182497 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | ||||| || || || || || || |||||||||||||| ||||| || || ||||||| Sbjct 1182496 TGAGCCAGAAGATTGACGCAAAAGAACCAGAAAAGAAGATGCCTTCCACAGCGGCAAAGG 1182437 Query 33446 C 33446 | Sbjct 1182436 C 1182436 Score = 102 bits (112), Expect = 1e-16 Identities = 97/124 (78%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 33564 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33623 |||||||| ||||| || || | ||||| |||||||||||||| |||||||| || || Sbjct 1180952 ATCTTTAATGTAAGTGTCAATAAGCAGACTGTACATTTCCGAATGTATGTTTTCCATAGC 1180893 Query 33624 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33683 ||||| || ||||||||||| | || || ||||| || |||||| | |||||| || Sbjct 1180892 AATCTGGAAGCCGTAGAAACAACGGGCTTCTGTAATTTGAACTTCTTGGCTAAATCGCTC 1180833 Query 33684 CGCC 33687 | || Sbjct 1180832 CACC 1180829 >seq6919 Length=1122 Score = 82.4 bits (90), Expect = 1e-10 Identities = 102/139 (73%), Gaps = 3/139 (2%) Strand=Plus/Minus Query 32957 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTT 33013 |||| |||||| |||| |||| |||| ||| ||| | |||||||||||||| Sbjct 625 TTTAGAAGTCAGCATCCAAAGTAAAAGAATTCTCTGTGGGGCTGGACATAACTCCCATCC 566 Query 33014 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 33073 | || || || ||||| | || || || || || || || ||||||| || ||||| | Sbjct 565 TCTGATACTCGCCCACTCTCTTCTCAAAGAAGTTTGTCTTCCCTTCCAGAGAAATATTCT 506 Query 33074 CCATGAAATCAAACGGATT 33092 ||||||| ||||| ||||| Sbjct 505 CCATGAAGTCAAATGGATT 487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622891640896600