Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octodon_20degus_20[refseq_20GCF_5F000260255.1_202012-05-01] 7,135 sequences; 2,995,889,303 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq288 452 5e-122 seq187 226 4e-54 seq206 196 6e-45 seq146 129 7e-25 seq151 120 4e-22 seq64 109 7e-19 >seq288 Length=2168581 Score = 452 bits (500), Expect = 5e-122 Identities = 942/1394 (68%), Gaps = 18/1394 (1%) Strand=Plus/Plus Query 62426 CCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCA 62485 ||| |||| | || ||||| || || || ||||| ||||| || || || | || Sbjct 510321 CCTTCATAGATTTCATATGGGCCAAGCTCCTTGGCTAGCTCACAGCTGGCTTCCAGGGCT 510380 Query 62486 CCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAAT 62545 || |||||||| ||||| | ||| | ||||||| || || || | || ||||| Sbjct 510381 CCATAATAAATAGTTTCAAGGATTTATTTATTTAATAACTGGGCCTCTATACTCTCAAAA 510440 Query 62546 GGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTA 62605 ||||| | | || ||||| | ||| | | ||||| || ||||| || || |||||| Sbjct 510441 GGATATCTCATCAGGATAAAGGTATCTACCAGCCCTTGTACTCCAATTCCAATGGGTCTA 510500 Query 62606 TGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTA 62665 || | ||||| || | | || ||||| | |||||| | | ||||| ||||||||| Sbjct 510501 TGGCATTTATTTGATAAATGTGCCTCTGGGACAGGATAGT---TTATATCGATAATTTTA 510557 Query 62666 TTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCA 62725 || | ||||| |||||| ||||| || || || ||| ||| || || Sbjct 510558 TTCAAATTTCGGACAATAGCTTTGGTGACTTCTGCCAATTTCTCAAAGTCGTATGTGTGT 510617 Query 62726 TCTATT---ACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTA 62782 ||| | ||| |||| |||| || | || |||| |||||||| || |||||||| Sbjct 510618 TCTGGTGTAACATACATATTCAGGGCCAGGGAAGCCAAGTTACAAACTGCAACCTCATTT 510677 Query 62783 GCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTT 62842 | ||||| | ||| || ||||| || || || || ||||| ||||| | || Sbjct 510678 TTGCTGGTATATTCAACTATTTCTGTGCACAGGTTGCTGCATTTGATTGTTCCCAGGTTC 510737 Query 62843 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCA 62902 || || || ||||| ||||| | ||| || || || ||| | | ||||| | || Sbjct 510738 TGCTGGTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACAGGGTACCCGGCTCT 510797 Query 62903 ATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGATTTGT---- 62957 ||||||| || | || | | ||| | | || |||| |||| | |||| Sbjct 510798 GTCTGAGACTCAGTGATGGTGTACCAAAGCTGCT-GAGCTTTTACAAC---TTTGCGAAC 510853 Query 62958 ATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGT 63017 || | || | |||| || | ||| || || || || ||||||||||| | | Sbjct 510854 ATGACCTTGTT-TTTCATAACTTTCATATAACTTCTCAAATTCCTCTCCCCAAACCTCAT 510912 Query 63018 CCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63077 |||| |||||||| |||| ||||||| ||| ||||| || | | || ||||||| Sbjct 510913 CCAGGCCAGGACACTCATTTGGACACAGCAAAGACCAGTCCTGATTAGTCTCTACTCGTT 510972 Query 63078 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGT 63137 |||| ||||||| |||||||||| || | || |||| |||| | || || || | Sbjct 510973 TCATGAAGAGATTCAGAATCCAAAGGGCAAAGAAAAGATTCCTGGCACGCTGCTCTTCTT 511032 Query 63138 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 63197 ||||||| |||||||| | ||| || ||| | | || || ||||||| || |||| || Sbjct 511033 TTCCTGTGTTCTTTTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCAAGGCTCCAGGT 511092 Query 63198 ATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 63257 | || || | | ||||| | |||||||| || ||||| | || | ||| ||||| | Sbjct 511093 AAATAGCAAATGCCCCAGGGCACTTGTTTCCACCTTGATCAACATAACGAGCTGTGTTGT 511152 Query 63258 TATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGC 63317 |||| ||||||| |||||| | || ||||| || | ||||||||||| | || |||| Sbjct 511153 TATACACTCTCAGCATTGGTACAAGGCCATTAGAATTGCCATTGGTCCCAGCTATGTAGC 511212 Query 63318 TTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63377 | ||| | || | |||| ||| | | | ||| ||||| || || |||||| || | Sbjct 511213 TGCCAGTAGCCCAAATACAACTCACAGTGACACCAATTCCTCCAGCGGATTTAGAAATCA 511272 Query 63378 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 63437 |||| || | || | || ||||| ||||| || | || ||||| |||| | || | Sbjct 511273 ATGCACACTGCTTCAGAGTGTCATAAATGCCTTCGGTGCTGTCATCTTTCATACTCAGAA 511332 Query 63438 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63497 | |||||||| || | ||| | | | || | ||||| || | | |||||||| | Sbjct 511333 GGAAACAGCTTGAAAGTTGTGGGCAGTTGGTACTAGCATTGAAGAGAGAGGGAGAAGCAT 511392 Query 63498 GAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATT 63557 |||||||||| || | ||||| || ||||| || ||||| || | ||||| || || Sbjct 511393 GAGTAAACCACTTCTGGGAAAGAAGGTTGTATGTTTCAATTGCAGCCTCTATGTCTTCTT 511452 Query 63558 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGT 63617 ||||| || || | || | ||| ||||| ||||| || |||||| | | || | Sbjct 511453 TGTGAATCCCCACAGACACCCTCATCAACATATGCTGCGGCCTTTCAGCCACTTTTCCAT 511512 Query 63618 TTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 63677 | || |||||||| ||||| | |||| ||| ||||| ||||| || || || || || | Sbjct 511513 TGATCTTCAACAAATAGGACCTCTCCAGAGTCTTAAAGCCAAAGTAATTATAAGAGAAAT 511572 Query 63678 CTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGG 63737 ||| || || || || | || || || ||| |||| ||| | ||||| | Sbjct 511573 CTCAGTCATAGATGATGGCAGAATTCAGGCGATCTTTATGGGCCAAAACAATATCCAGTG 511632 Query 63738 TAATACTT-GAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAA 63796 | |||| | | || ||| ||||||| ||||| | ||||| | ||||||||| | Sbjct 511633 T-TGACTTGGCCACCATGGGAGAATGTTTGCCATTATGTGGATTTATATAGTTGAAGAGG 511691 Query 63797 TCCTCCATCACTTC 63810 |||||||| || || Sbjct 511692 TCCTCCATTACATC 511705 Score = 161 bits (178), Expect = 1e-34 Identities = 297/430 (69%), Gaps = 9/430 (2%) Strand=Plus/Plus Query 61874 GGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGC 61933 ||| | || | || ||| ||||| || || || | | | || |||| | || || || Sbjct 508938 GGTCTTGTCCTTAAATAATACATCCCAGTCTTCAAATCCAGCTTCCAAGCATAGAAGTGT 508997 Query 61934 ATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGA 61993 |||| || || ||| || | || || || || ||||| |||| | | || || ||| Sbjct 508998 GTACTGGTGAGCTTGTG-TAGTTGGGCTCAGCAATGTGGATGTTCAAAAACTGGCTCTGA 509056 Query 61994 TCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAA 62053 || ||||| || || | || |||||||| || | | || || || | |||||||| Sbjct 509057 TCAATGAAAGCACCACGATCAGCAGCCATCTTCAGGACAGTTTTCTGAGAGATTTCCCAT 509116 Query 62054 ATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TAT--TCTGAATGGATC 62108 | || ||||||| | || | || || |||| ||| ||| |||| || || | Sbjct 509117 ACTGTCTTATAAAGCTGGTTCAGGTCATCGGGAA--TTTCCACTATGCTCTGGATAGAGC 509174 Query 62109 CACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAA 62168 || || |||||| ||| || || || ||||||||||| | |||||| | | Sbjct 509175 CATTGCAGGCAATAATCTGATTTTTCATTTCTTCATTCCATAAGCCCCGCTCGGTAAGAT 509234 Query 62169 CTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAA 62228 || | | || || ||||| || | ||||||||||| || || ||||| ||||||| | Sbjct 509235 CTTTCAATAG-TGAGGATTTACAATCTGAAATTCTCCTGATAAGACTCTTAGAGTGTAGA 509293 Query 62229 TATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAG 62288 | || |||||||| ||||| | ||||||||| |||| ||| || ||||||||||| |||| Sbjct 509294 TGTTGCTGGTATAAGGTTCAATAGACTCATTTTTTCTCAAGATCTGAGCAGTTGAAGCAG 509353 Query 62289 TCGGCATAGG 62298 | | ||| || Sbjct 509354 TAGTCATGGG 509363 >seq187 Length=5094135 Score = 226 bits (250), Expect = 4e-54 Identities = 600/913 (66%), Gaps = 25/913 (3%) Strand=Plus/Plus Query 32314 TTTAAAAGTCAACATCTAGAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 32370 ||||||||||| |||| || |||| ||| || || |||||||||||||| Sbjct 4782 TTTAAAAGTCAGCATCCCAAGTAAAAGAATTCTCCATAGGAATGGACATAACTCCCATAG 4841 Query 32371 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT- 32429 | || || ||||| || || || || || || || || ||||| || || |||||| Sbjct 4842 TCTGATACTCACCAACTATCTTCTCAAAGAAGTTTGTCTTCCCTTCCAAAGAAATATTTC 4901 Query 32430 TCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 32489 || ||||| || |||||||| || ||| || | || || | ||| || Sbjct 4902 TCTATGAAGTCAAATGGATTTTCCACTCGGAAAACCTTGCTGAAGCCTAGTTCCAGCATG 4961 Query 32490 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 32549 | || || || ||||| | || | |||||||| | | ||||| || ||| | Sbjct 4962 AGCCTGTCAGCCACAAACTTGATGCACTGTTTCATCAAATTGGAGTTCATCCCGATAGGC 5021 Query 32550 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 32609 || || || | || | || || || || || ||||| || |||| | | ||| Sbjct 5022 TTCACCGGCAAGCCCTCCGTGAGGAACTCCTGCTCAATGCCGATGGCGTTGATGACAATC 5081 Query 32610 GATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAA 32669 || || | | || ||| | || | || || ||||||| || |||| Sbjct 5082 TCCCTCACCCTCTGCTCCAACGGCTTGTGCACCAGGTGCTTGAACATCAGGCACACGAAG 5141 Query 32670 TCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATT 32729 || || | | ||||||| ||| ||||| | |||||||||||| ||||| || ||||| Sbjct 5142 TCACAACGCAAGCCCTCGTATCTGCTAATGAGTTCGTTGGAAAAGGTGAGGCCAGGCATG 5201 Query 32730 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCT 32789 ||||| || || || ||||| || || ||||||| || |||||||||||||||||||| Sbjct 5202 AGGCCCCGTTTCTTGAGCCAGAAGATCAACGCAAAAGAACCAGAAAAGAAAATTCCTTCC 5261 Query 32790 ACTGCCGCAAAGGCAATAA-GTCTCTCTCCATAACCGGCGC---TGTCATGTATCCACTT 32845 || | ||||||| | || | |||||||| ||| |||| |||||| Sbjct 5262 ACAGTGACAAAGGCCACCGTGTGT-TCTCCATATGTGGCCTCTTTGTCCCCTATCCAGCG 5320 Query 32846 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATA 32905 ||||| || |||||||| || ||||| | || ||||| | ||||| |||||| | Sbjct 5321 CAACGCCCAGTCTGCCTTCTTCTTCACACAGGCCACGGTCTCAGTGGCATTGAAGAGAAA 5380 Query 32906 GtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATG 32965 | |||| | |||| ||| || || || || | || | |||||||||||||| Sbjct 5381 CTCCCTTTCTTGGGAATCTCTAATGTAAGTGTCCATAAGGAGTGTGTACATTTCCGAATG 5440 Query 32966 AATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTC 33025 | |||||| ||||| || || || |||||||| || | || || ||||| || ||||| Sbjct 5441 CAGGTTTTCCATGGCAATCTGGAAGCCGTAGAAACACCGGGCTTCTGTAATTTGAACTTC 5500 Query 33026 TGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA---- 33081 | |||||| || | | ||| ||| | ||||| || || ||||| | ||||| Sbjct 5501 TTGGTTAAATCGCTCCACCAGATTCTCACTGACTATGCCATCGCTGGCAGGAAAAAAAAA 5560 Query 33082 -ACGCCAATACA-----------TGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTAT 33129 | |||| | ||| |||||| ||| | || || | | || | Sbjct 5561 TATAATAATAAAAAGTTAGAATGTGTGATATAAAGTATCTCTCTTCAGCCTTCAGGGCTT 5620 Query 33130 TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTG 33189 ||| | | || ||||| || | ||| ||||| ||| |||||||||| || ||||| | Sbjct 5621 CCCAGTGCTGAATGTCTTTGGAAAGATCGACTTCCTCCGCTGTCCAAAAAGAAGCCTCGG 5680 Query 33190 CCTTTTTATACAT 33202 | || ||| |||| Sbjct 5681 CTTTCTTACACAT 5693 >seq206 Length=4534510 Score = 196 bits (216), Expect = 6e-45 Identities = 720/1106 (65%), Gaps = 24/1106 (2%) Strand=Plus/Plus Query 62423 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 62482 || ||| |||| || || ||||| || | || || ||||| ||||| || || || || Sbjct 2975816 GAGCCTTCATAGGTTTCATATGGGCCATGCTCCTTGGCTAGATCACAGCTGGCTTCCAAG 2975875 Query 62483 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCA 62542 || || ||||||| || | | ||| | |||||| | || | || | || ||| Sbjct 2975876 GCTCCATAATAAACAGTCACAATGATTTGGTTATTTCAAAACTGGGACTCTGGACTCTCA 2975935 Query 62543 AATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGT 62602 || | || | | || ||||| || |||| | | ||| || |||| | || || Sbjct 2975936 AAATGTTATCTCATCAGGATAAAAGCATCTGTGAGCCGTTGTACTCCAACTTCAATGGGG 2975995 Query 62603 CTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 62662 ||| ||||| || | | || |||| | ||| || || || || || |||||| Sbjct 2975996 AAATGATGTTTATTTGATAAGTGTGCCTCTGAGACAGGGTAGTATTTTATGTCAATAATT 2976055 Query 62663 TTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATC-G 62721 ||||| |||||| |||||| ||| || || ||| ||| | | ||| || | Sbjct 2976056 TTATTCAGATTTTGGACAATATCTTCCGTGACTTCTGTCAATTTCTCATAGTCATATGTG 2976115 Query 62722 CCCATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCAT- 62780 | | | ||| |||| |||| || | || |||| ||||||| || ||||||| Sbjct 2976116 TTCTGATGTAACATACATATTCAGGGCCAGGGAAGCCAAGATACAAACTGCAACCTCATC 2976175 Query 62781 -TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAA 62839 | || | |||| || || || ||| || || || || ||||| ||||| | Sbjct 2976176 TTTGCTG--GTCTATTCTACCATTTCTGTGTGCAGGTTGCTGCATTTGATTGTTCCCAGG 2976233 Query 62840 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTT 62899 || | || || ||||| |||| | | || ||| || || |||||||| ||||| || Sbjct 2976234 TTCTTCTGGTTGCTCTTCCAGTTATAAGAATGCTTGTAGAGCATGAATGGGGTACCCGTC 2976293 Query 62900 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGT-A 62958 | ||||||| || || || | | ||| | | || | ||| | | | ||| | Sbjct 2976294 TG--TCTGAGACTCAATGATGACATACCA-ATG-CTGCTGAATTT-TCACAACTTTACGA 2976348 Query 62959 TCTCTT--TTCTCTTTCGTATAGTGT-ATACAATCGTTCGAACTCGTCTCCCCAAACATT 63015 | | || | |||| || | | | ||| || || || || ||||||||||| | Sbjct 2976349 ACACGACCTTGTTTTTCATA-ACTCTCATATAAGGTATCAAATTCCTCTCCCCAAACCTC 2976407 Query 63016 GTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTC-TCCGTCATCCTTCACTC 63074 |||||| |||||||| ||| | |||||||| || || || | | || | | || Sbjct 2976408 GTCCAGACCAGGACACCCATTTTG-CACATCAAAGATCAGTCCTGAATAGTCTCTGA-TC 2976465 Query 63075 GTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCT 63134 |||||| |||||||| |||||||| | || | || ||||| || | ||||| Sbjct 2976466 ATTTCATGAAGAGATCCAGAATCCAAGGTGCAAAGAAAAGATCCCTAGCATGCTGTTCTC 2976525 Query 63135 CGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCA 63194 | ||||||||||||||| | ||| || ||| | | || || ||||| | |||| Sbjct 2976526 CCTTTCCTGTATTCTTT---AAATCAAGAAACTCAAGCATTTCTAAATGCTGAGCCTCCA 2976582 Query 63195 AGTATATGGC-CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 63253 || | || | || || ||| | | || ||||| | |||| | || ||| | ||| Sbjct 2976583 AGGAAATAACAAATGAC-CCAAGGCACTTATTTCCACTTTGATGAACATAACTATCTGTG 2976641 Query 63254 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATA 63313 || ||||| ||||||| |||||| |||| |||||| || | |||||||||| | || Sbjct 2976642 TTGTTATACACTCTCAGCATTGGTATAAGACCATT-AATATTCCATTGGTCCAAGCTATG 2976700 Query 63314 TAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAG 63373 |||| || | || |||| | ||| | | | ||| ||||| || || |||||| Sbjct 2976701 CAGCTATCAGTAGCCTGAATGTAACTCACAGCAACACCAATTCCACCAGCAGATTTAGAA 2976760 Query 63374 ATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTA 63433 || ||||| | | || | || | || ||||| | || || ||||| |||| | Sbjct 2976761 ATCAATGCATACTGCTTCAGAGTGTAGTAAATGCCTTTGATGCTGTCATCTTTCATAATC 2976820 Query 63434 AGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAA 63493 || |||||| |||| || ||||| | | | || | | ||| || | || |||||| Sbjct 2976821 AGAAGAAAAAAGCTTGAAATTTGTGGGCAGTTGGTATCAGAATTGAAGAGAGTGGGAGAA 2976880 Query 63494 GCGTGAGTAAACCATTTTTCAGAAAG 63519 || |||||||| || || | | |||| Sbjct 2976881 GCATGAGTAAAGCACTTATTAAAAAG 2976906 Score = 109 bits (120), Expect = 7e-19 Identities = 252/375 (67%), Gaps = 5/375 (1%) Strand=Plus/Plus Query 61917 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 61976 |||| || || || |||||||| || || | | |||| | || || || || ||||| | Sbjct 2975273 TCCAACCATAGAAGTGCATACTGGTGAGCTCGCTATAATTGGGCTCAGCCATGTGGATGT 2975332 Query 61977 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCT 62036 ||| ||| || | ||||| | || || || || | |||||| || | | || | Sbjct 2975333 TCAAAGACTGGATCTGATCAACCAAAGCACCATGATCAGAAGCCATCTTGAGGACAGTTT 2975392 Query 62037 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTT-TGTA 62095 | || | |||||||| | ||||||| |||| | || || |||| | | || Sbjct 2975393 TCTGAGAGATTTCCCATCCGATCTTATAAAGCTGCTTCAGGTCATCAGGAATTTCCTCTA 2975452 Query 62096 T--TCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATT 62153 | |||| || || ||| || |||||| ||| || || | | ||||||||| Sbjct 2975453 TGCTCTGGATAGAGCCATTGCAGGCAATAATCTGATTTTTCATTCCTTTATTCCATAAGC 2975512 Query 62154 TTCTCTCGGTTAAAACTCT-AAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAAT 62212 ||| | | | || | || ||| | ||||| || | | ||||||| | ||||| Sbjct 2975513 CCTGCTCCATAAGATCTTTCAATAAGA-GAGGATTTACAATCTTAAATTCTTCTGACAAG 2975571 Query 62213 ACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATT 62272 ||| | | |||||| || || |||||||| |||| | ||||| |||||| ||||| || Sbjct 2975572 ACTTTTCAAGTGTAGATGTTGCTGGTATAAAGTTCAATAGACTTATTATTCCCCAAGATC 2975631 Query 62273 TGAGCAGTTGATGCA 62287 ||||||||||| ||| Sbjct 2975632 TGAGCAGTTGAAGCA 2975646 >seq146 Length=7541600 Score = 129 bits (142), Expect = 7e-25 Identities = 109/134 (81%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 62192 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 62251 || ||||||||||| ||||| ||||| |||||||| || || |||||||| ||||| | | Sbjct 3726378 ACCTGAAATTCTCCTGACAAGACTCTTCGAGTGTAGATGTTGCTGGTATAAGGTTCAATA 3726319 Query 62252 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62311 ||||| ||||||||||| || ||||||||||| ||||| ||||| || || | | || | Sbjct 3726318 GACTCGTTATTTCCCAAGATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAGA 3726259 Query 62312 CTATTTCTAAGACC 62325 || ||||| | ||| Sbjct 3726258 CTGTTTCTTATACC 3726245 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 63071 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGT 63130 ||||||||||| |||||||| ||||||||||| || | || |||||||||| | || Sbjct 3714759 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGATCTCTGGCACGCTGC 3714700 Query 63131 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 63190 || || |||||||| ||||| || | ||| || ||| | | || || ||||||| || Sbjct 3714699 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCAAGGC 3714640 Query 63191 TCCAAGTATATGGC 63204 |||| ||| || || Sbjct 3714639 TCCAGGTAAATAGC 3714626 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 63467 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTG 63526 || || ||||| || | || |||||||| ||||||||||| || || ||||| || ||| Sbjct 3706552 GTGCCAGCATTGAAGAGAGTGGGAGAAGCATGAGTAAACCACTTCTCGGAAAGAAGGTTG 3706493 Query 63527 TACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 63586 || || ||||| || | ||||| || || ||||| || || | || | ||| ||| Sbjct 3706492 TATGTTTCAATTGCAGCCTCTATGTCTTCTTTGTGAATCCCCACAGACACCCTCATCAAC 3706433 Query 63587 ATGTGCTGAGGTCTTTCA 63604 || ||||| || |||||| Sbjct 3706432 ATATGCTGCGGCCTTTCA 3706415 >seq151 Length=7174217 Score = 120 bits (132), Expect = 4e-22 Identities = 99/121 (82%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 32683 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 32742 |||||||||| ||||| | |||||||||||| ||||| || ||||| || || || || | Sbjct 1182556 CCTCGTCTCTGCTAATGAGTTCGTTGGAAAAGGTGAGGCCAGGCATGAGTCCTCGTTTCT 1182497 Query 32743 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 32802 | ||||| || || |||||||| || ||||||||||| || ||||| || || ||||||| Sbjct 1182496 TGAGCCAGAAGATTGACGCAAAAGAACCAGAAAAGAAGATGCCTTCCACAGCGGCAAAGG 1182437 Query 32803 C 32803 | Sbjct 1182436 C 1182436 Score = 91.5 bits (100), Expect = 2e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 32921 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 32980 |||||||| || || ||||| | ||||| |||||||||||||| |||||||| || || Sbjct 1180952 ATCTTTAATGTAAGTGTCAATAAGCAGACTGTACATTTCCGAATGTATGTTTTCCATAGC 1180893 Query 32981 CATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33040 || || || |||||||| || | || || ||||| || |||||| | |||||| || Sbjct 1180892 AATCTGGAAGCCGTAGAAACAACGGGCTTCTGTAATTTGAACTTCTTGGCTAAATCGCTC 1180833 >seq64 Length=12756018 Score = 109 bits (120), Expect = 7e-19 Identities = 214/315 (68%), Gaps = 1/315 (0%) Strand=Plus/Minus Query 32922 TCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 32981 ||| | | ||| ||||| || | | || ||||| || || |||| || || ||| Sbjct 2273454 TCTCTGATATAGGTATCTATGAGCAAGCTGTACATCTCTGAGTGAACATTCTCGATGAGG 2273395 Query 32982 ATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCT 33041 || || || ||||||||||| | ||||| | | ||| || || | || || || Sbjct 2273394 ATCTGGAAGCCGTAGAAGCAGCGGGCCTCAGGGACCTGCACCTCCTGGCTGAAGCGCTCC 2273335 Query 33042 GCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA-ACGCCAATACATGTTTTAT 33100 | || |||||||| || ||||| ||| | |||||||||| | || || || || || Sbjct 2273334 ACCAAGTTTTCATTTACAATTCCATCATTTGCTGCAAAAAGAGGCTAAGACGTGAGAAAT 2273275 Query 33101 AAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCAC 33160 ||| ||||| || || || | || |||| ||| | | | ||| || |||| ||| || Sbjct 2273274 AAAGTATTTCTCATCCGGCTTGAGCTTATGCCAGTGAGGCAGATCCTTTGATAGATCAAC 2273215 Query 33161 TTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATA 33220 || || | ||||| || |||| || ||| || ||||| ||||||||||| | || Sbjct 2273214 CTCCTCTGCCGTCCAGAAGGATGTCTGCACCTGCTTGTACATCTTCCAGATGTCGGGGTA 2273155 Query 33221 TTGAATTGGAAAAAT 33235 || || || || || Sbjct 2273154 CTGGATGGGGAAGAT 2273140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633575487946000