Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octodon_20degus_20[refseq_20GCF_5F000260255.1_202012-05-01] 7,135 sequences; 2,995,889,303 total letters Query= NC_009334.1 Length=172764 Score E Sequences producing significant alignments: (Bits) Value seq131 91.5 2e-13 >seq131 Length=8239869 Score = 91.5 bits (100), Expect = 2e-13 Identities = 70/83 (84%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 10080 AGCTGCAGGAAAAAGGAATTTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTACA 10139 |||| || |||||||| | ||||||||||||||||| |||||||| || || ||||| | Sbjct 2012235 AGCTCCAAGAAAAAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTATA 2012176 Query 10140 TAGAAGCATACATGACAATTAAA 10162 ||||||| ||||||||| | ||| Sbjct 2012175 TAGAAGCCTACATGACACTGAAA 2012153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552667504570400