Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octodon_20degus_20[refseq_20GCF_5F000260255.1_202012-05-01] 7,135 sequences; 2,995,889,303 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq74 390 9e-104 seq107 255 5e-63 seq109 232 5e-56 seq82 210 2e-49 seq75 138 9e-28 seq11 129 5e-25 seq26 118 9e-22 seq10 118 9e-22 seq94 109 4e-19 seq125 107 2e-18 seq126 105 5e-18 seq20 104 2e-17 seq18 104 2e-17 seq3487 96.9 3e-15 seq129 96.9 3e-15 seq111 96.9 3e-15 seq7 96.9 3e-15 seq272 95.1 1e-14 seq12 84.2 2e-11 >seq74 Length=13126430 Score = 390 bits (432), Expect = 9e-104 Identities = 463/624 (74%), Gaps = 5/624 (1%) Strand=Plus/Plus Query 29765 TGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGT 29824 ||||||||| || || || | | ||||||||||||||||| | | ||||| ||||| Sbjct 9227889 TGGGAAAGGC-CTTGGTTCTCGTTGAAGCTGAGTCTTCAGCGGCTTGATGTGATTCAGGT 9227947 Query 29825 AGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAG 29884 ||| || |||||||||| ||||| || || ||||| || | || || |||||||| | Sbjct 9227948 AGATATGTGCGTCTCCCAAAGTGTGCACGAAGTCTCCTGGCTTCAGGCCTGTGACGTGCG 9228007 Query 29885 CCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGT 29944 | | |||||| ||||| || | | ||||||||||||| |||||||| || || ||||||| Sbjct 9228008 CGACCATGTAGGTGAGCAGCGCGCAGCTGGCGATGTTGAAGGGTACGCCCAGGCCCATGT 9228067 Query 29945 CCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACA 30004 |||| |||| |||||| ||||| || || ||||| |||| |||||| ||||| |||| Sbjct 9228068 CCCCTGACCGCTGGTACAGCTGGCAGGACAGCTCCCCGTTCACCACGTAGAACTGGCACA 9228127 Query 30005 TGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGA 30064 ||||||||| ||||| || ||||| || | ||||| ||||||||||| |||| || Sbjct 9228128 GGGTGTGGCAGGGAGGCAGCGCCATCAGAGGGAGATCTTTTGGGTTCCAGGCACACATGA 9228187 Query 30065 TGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCA 30124 |||| | ||||| | |||| | | ||||| || | |||| |||||||| || | Sbjct 9228188 TGATCCTTCTGTCGTTAGGGTCGGTTTTGATGGTGTTGATCACGTTCTGCAGCTGGTCAA 9228247 Query 30125 CCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACT 30184 | || |||||||| |||| | | || |||| ||||| |||||||||||||||| Sbjct 9228248 CTCCTTGACCCGAGTAATCTGAGTCCGTATCTTTGTAGTCTGCCCCGAAATGCCTCCACT 9228307 Query 30185 GGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCG--AAGCCCCTCTTGTC 30242 |||| || || || || |||||||| || |||| | ||| | || ||| |||| Sbjct 9228308 GGAAGCCATAGACGGGGCCCAGGTCCCCTTCTTTGC--GGCTAGAAAACCCCAGGCTGTC 9228365 Query 30243 CAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTT 30302 || || || | ||| || ||||| ||||||||||| || || || || ||||| || Sbjct 9228366 CAGGAAATCCCGGGACCCATTGGCATCCCAGATCTTCACTCCTTTGGATGACAGCTCCTT 9228425 Query 30303 GGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGAC 30362 || ||||| || || ||| |||||||||||||| |||| | ||||||| || || Sbjct 9228426 GGCATTTGTAGATCCCTTGATAAACCACAGCAGCTCTTCCAGAATACCCTTCCAGAATAC 9228485 Query 30363 CCTCTTGGTCGTGAGGAGGGGAAA 30386 | |||||| || || |||||||| Sbjct 9228486 ACGCTTGGTGGTCAGCAGGGGAAA 9228509 >seq107 Length=10030941 Score = 255 bits (282), Expect = 5e-63 Identities = 392/558 (70%), Gaps = 21/558 (4%) Strand=Plus/Minus Query 29791 AGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGG 29850 |||||||| |||||| | || | ||||| |||||||| || || ||||||| || || Sbjct 3003366 AGCTGAGTTTTCAGCAGCTCAATGTGATTCAGGTAGATATGTGCATCTCCCAAAGTATGC 3003307 Query 29851 ACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAG 29910 ||||| |||| |||| || || | || ||| ||||| || | |||| Sbjct 3003306 ACAAAGCCTCC--------------TGACATGCGCGACCAAGTAGGTGAGCAGCGCGTAG 3003261 Query 29911 CTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTG--GTAGAGCTGAC 29968 ||| ||||||| ||||| || || || ||||| ||||| |||| ||| ||| |||| | Sbjct 3003260 CTGACGATGTTGAAGGGCACTCCCAGGCCCATATCCCCTGACCACTGTGGTACGGCTGGC 3003201 Query 29969 ACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCA 30028 | || ||||| || | ||||||||||| |||| ||||||||| ||||| ||||||| Sbjct 3003200 AGGACAGCTCCCCATTCACCACGTAAAACTAGCACAGGGTGTGGCAGGGAGGCAGAGCCA 3003141 Query 30029 TGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGT 30088 | || | ||||| |||| ||||| |||| |||||| | ||||| || |||||| Sbjct 3003140 TCAGAGGGAGATCTTTCAGGTTTCAGGCACACATGATGATCCTTCTGTCATCAGGGTTGG 3003081 Query 30089 TCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCC 30148 | ||||| || | |||| |||||||| || | || || ||||| |||| Sbjct 3003080 TTTTGATGGTGTTGATCACGTTCTGCAGCTGGTCATCTCCTTGACCTGAGTAATCTGAGT 3003021 Query 30149 TCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGT 30208 ||| | ||| || || | |||||||||||||||||| || | || || |||||| Sbjct 3003020 CCATACCTTCGTAGTCAGCCCTGAAATGCCTCCACTGGAAGCCACAGACGGGGCCCAGG- 3002962 Query 30209 CTCCCTCTTCCCTGT-GCTCG--AAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGG 30265 |||| ||||| || ||| | || ||| | |||| || || | ||| || |||| Sbjct 3002961 -TCCCCCTTCCTGGTGGCTAGAAAACCCCAGGCTATCCAGGAAATCCCGGGACCCATTGG 3002903 Query 30266 CGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGA 30325 | ||||||||||| || || || || ||||| |||| |||| | || ||| | Sbjct 3002902 CATCCCAGATCTTCACTCCTTTGGATGACAGCTCCTTGGCATTTGCATATCCCTTGATAA 3002843 Query 30326 ACCACAGCAGCTCCTCCA 30343 |||||||||| ||||||| Sbjct 3002842 ACCACAGCAGTTCCTCCA 3002825 >seq109 Length=10228628 Score = 232 bits (256), Expect = 5e-56 Identities = 431/625 (69%), Gaps = 17/625 (3%) Strand=Plus/Plus Query 29765 TGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGT 29824 ||||||||| || || || | || |||||||| |||||| | || ||||| |||| Sbjct 4836432 TGGGAAAGGC-CTTGGTTCTCGCTGAAGCTGAGTTTTCAGCTGCTCAGTGTGATTTAGGT 4836490 Query 29825 AGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGG-TTCTAGCCCGGTGACGTGA 29883 ||| | || |||| || || || ||||| || || || ||| |||| | |||||| Sbjct 4836491 AGATAGGTGCATCTCTCAAAGTATGCACAAAGTCACCTGGCTTCAGGCCCCGCGACGTGC 4836550 Query 29884 GCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATG 29943 || | || ||| ||||| | |||||||| || | | |||| || || || |||||| Sbjct 4836551 GCGA-CAAGTAGGTGAGCCCCGCGTAGCTGGTGAGGCTGCAGGGCACGCCCAGGCCCATG 4836609 Query 29944 TCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACAC 30003 ||||| |||| ||| || ||||| || || ||||| | | |||| | | ||| Sbjct 4836610 TCCCCTGACCGCTGCTACAGCTGGCAGGACAGCTCCCTAT---TCACC-AGAGCTG---- 4836661 Query 30004 ATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACG 30063 ||||||||| ||||| || |||| || | ||||| |||||||||| | ||| | Sbjct 4836662 --GGTGTGGCAGGGAGGCAGCGCCACCAGAGGGAGATCTTTCGGGTTCCAGGAGTACATG 4836719 Query 30064 ATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCC 30123 ||||| | || || || |||||| | ||| || | ||| |||||||| | Sbjct 4836720 ATGATCCTTCTATCATCAGGGTTGGTTTTGACAGCGTTGATCATGTTCTGCAGCTGGCCT 4836779 Query 30124 ACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCAC 30183 || || |||| | | |||| |||||| |||| || || |||||||||||||| Sbjct 4836780 ACTCCTTGACCCGGGCAATCTGAGTCCATGTCTTTGTAGTCAGCCCCGAAATGCCTCCAG 4836839 Query 30184 TGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCT--TGT 30241 |||| || || || || ||||||| ||||| | ||| || ||| ||| ||| Sbjct 4836840 GGGAAGCCATAGACGGGGCCCAGGTGCCCCTCCTGGCTG--CTAGAACACCCCAGGCTGT 4836897 Query 30242 CCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTT 30301 ||| || | | ||| ||| |||| ||||||||||| || || || || ||||||| Sbjct 4836898 CCAGGAAACCCCAGGACCCGCTGGCATCCCAGATCTTCACTCCTTTGGATGACAGCTCTT 4836957 Query 30302 TGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGA 30361 || || || || | ||| |||||||| |||| |||| ||| ||||||| || | Sbjct 4836958 TGACATTAGTAGATACCTTGATAAACCACAGTGGCTCGTCCAGGACACCCTTCCAGAACA 4837017 Query 30362 CCCTCTTGGTCGTGAGGAGGGGAAA 30386 | | |||||| || || |||||||| Sbjct 4837018 CACACTTGGTTGTCAGCAGGGGAAA 4837042 >seq82 Length=12555031 Score = 210 bits (232), Expect = 2e-49 Identities = 480/715 (67%), Gaps = 18/715 (3%) Strand=Plus/Plus Query 29677 ATGGCGGGATGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGG 29736 |||||||| || || || || || ||||| |||| | || | | ||||| || | Sbjct 10556077 ATGGCGGGGTGGGGATCATACCCTTCCAGTTGGAAACCTTCAACTGTGAAGTCATCGATT 10556136 Query 29737 TTCTCCACCCTCCTGTTTATCCTCAG-TGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTG 29795 ||||| || | | || | || | ||||||||| || | || | | | ||| Sbjct 10556137 TTCTCAACTTTTCAAAGGATTTTGAGCTTTGGGAAAGGC-CTCAGTTCTCATTGAATCTG 10556195 Query 29796 AGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAA 29855 || |||||| | || | ||||| || ||||| || |||||| ||| || || || || Sbjct 10556196 GGTTTTCAGCAGCTCAATGTGATTCAAGTAGATATGTGCGTCTGCCAATGTATGCACCAA 10556255 Query 29856 CTCTCCCGG-TTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGG 29914 || || | ||| |||||| || ||| | | |||||| ||| || |||||||| Sbjct 10556256 GTCACCTGCCTTCAAGCCCGC-GATGTGCGTGACCATGTAGTGGAGCAGCCCGTAGCTGG 10556314 Query 29915 CGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGA 29974 ||||||| ||||| || || || |||| || | | |||| |||||| ||||| | | Sbjct 10556315 CGATGTTGAAGGGCACACCCAGGCCCACGTTCTCTGACCGCTGGTATAGCTGGCTC---- 10556370 Query 29975 GCTCTCCGTCGCTCACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGC 30034 ||| || | |||||| ||||| |||| || |||||| ||||| || ||||| || Sbjct 10556371 ---CTCGTTCAC-CACGTAGAACTGGCACAGGGCGTGGCAGGGAGGCAGGGCCATCAGAG 10556426 Query 30035 CCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA 30094 | ||| | ||||||||||| |||| |||||| | |||| || ||||| ||| Sbjct 10556427 GGAGATCTGTTGGGTTCCAGGCACACATGATGATACTTCTGTTGTCAGGGTTAACTTTGA 10556486 Query 30095 TGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGT 30154 | || | || || |||||||| | || || || |||| |||| ||| | Sbjct 10556487 CGGTGTTGATCGCATTCTGCAGCTGGTTAACTCCTTGACCTAAGTAATCTGAGTCCATAT 10556546 Query 30155 CCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCT 30214 | |||| || || | |||| || ||||||||| | || || || ||||||| || Sbjct 10556547 CTTTGTAGTCAGCACAAAAATACCACCACTGGAAGTCATAGACAGGGCCCAGGT---CCC 10556603 Query 30215 CTTCCCTGTGCT---CGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCC 30271 || || ||| | || ||| ||| || || ||| || ||||| |||| Sbjct 10556604 CTGCCTGGTGGTTAGAAAACCCCAGGCAGTCTGGGAAATCCTGGGACCCATTGGCATCCC 10556663 Query 30272 AGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACA 30331 ||||||| || ||||| | |||||||||| || | || || ||| ||||||| Sbjct 10556664 AGATCTTCACTCCCTTGGATGGCAGCTCTTTGGCACTTATAGATCCCTTGATAAACCACA 10556723 Query 30332 GCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30386 |||||||||||| || ||||||| || || | ||||| || || |||||||| Sbjct 10556724 GCAGCTCCTCCAGGATACCCTTCCAGAACACACGTTTGGTTGTCAGCAGGGGAAA 10556778 Score = 129 bits (142), Expect = 5e-25 Identities = 186/260 (72%), Gaps = 8/260 (3%) Strand=Plus/Minus Query 112080 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 112139 ||||||||| || || || || || || || ||||| |||| || || |||||| | Sbjct 3134537 ATGAGCTCCTTGGGGAGGTTCCTTGAGTTCTCTACTGAGTACTATATTAATTCTGTCTTT 3134478 Query 112140 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 112199 || ||| | |||||| || || ||||||||||| ||||| |||||||||| ||||| || Sbjct 3134477 CAAAGGGCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCTACCCATTACCACCAGATT 3134418 Query 112200 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 112258 ||| || ||| ||||| | || | |||| | ||| | |||| || || || || | Sbjct 3134417 CTGTTTACCTTCCACTGAGGTGGTTGTGGTC-ATTCTCTGGAAGTAGTTGAATTCATTCC 3134359 Query 112259 AAAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATGTCTGGACACA 112318 || || |||| |||| |||||||| | ||||| ||||||| || ||| Sbjct 3134358 TGAG------CGGGGGCCAGGGCAAGTCTCCGTTCCTGCCGATACCCATGTTCTGAGACA 3134305 Query 112319 CGGCCACGATACCGTTCAGA 112338 |||| ||||| | ||||||| Sbjct 3134304 CGGCGACGATGCAGTTCAGA 3134285 >seq75 Length=11870250 Score = 138 bits (152), Expect = 9e-28 Identities = 129/164 (79%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 29869 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 29928 || || |||||||| || | |||||| ||||| || | |||||||||||||| ||||| Sbjct 4085023 AGGCCCGTGACGTGCGCGACCATGTAGGTGAGCAGCGCATAGCTGGCGATGTTGAAGGGC 4084964 Query 29929 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 29988 || || || ||||||||||| |||| |||||| ||||| || || ||||| || | | Sbjct 4084963 ACGCCCAGGCCCATGTCCCCTGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATTCACC 4084904 Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAG 30032 ||||| ||||| |||| || |||||| ||||| || ||||| || Sbjct 4084903 ACGTAGAACTGGCACAGGGCGTGGCAGGGAGGCAGCGCCATCAG 4084860 Score = 89.7 bits (98), Expect = 4e-13 Identities = 123/170 (72%), Gaps = 4/170 (2%) Strand=Plus/Minus Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209 ||| || |||| || || |||||||||||||||||||| || || || || |||||||| Sbjct 4081483 CATATCTTTGTAATCAGCCCCGAAATGCCTCCACTGGAAGCCATAGACGGGGCCCAGGTC 4081424 Query 30210 TCCCTCTTCCCTGTGCTCG--AAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCG 30267 || || | | ||| | || ||| |||||| || || | ||| || ||||| Sbjct 4081423 CCCTTCCTGGC--GGCTAGAAAACCCCAGGCTGTCCAGGAAATCCCGGGACCCATTGGCA 4081366 Query 30268 TCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 30317 |||||||||||||| || || || ||||| |||| ||||| || || Sbjct 4081365 TCCCAGATCTTTACTCCTTTGGATGACAGCTCCTTGGCATTTGTAGATCC 4081316 >seq11 Length=28182674 Score = 129 bits (142), Expect = 5e-25 Identities = 188/261 (72%), Gaps = 10/261 (4%) Strand=Plus/Minus Query 112080 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 112139 ||||||||| || || || || || || || ||||| |||| || || |||||| | Sbjct 11213749 ATGAGCTCCTTGGGGAGGTTCCTTGAGTTCTCTACTGAGTACTATATTAATTCTGTCTTT 11213690 Query 112140 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 112199 || ||| | |||||| || || ||||||||||||||||| |||||||||| ||||| || Sbjct 11213689 CAAAGGGCGATTCTTCTCAGGAATGGAGAACCAAGTCTTCCTACCCATTACCACCAGATT 11213630 Query 112200 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 112258 ||| || ||| ||||| | || | |||| | ||| | |||| || || || || | Sbjct 11213629 CTGTTTACCTTCCACTGAGGTGGTTGTGGTC-ATTCTCTGGAAGTAGTTGAATTCATTCC 11213571 Query 112259 AAAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACAC 112317 || || |||| |||| || ||||| | ||||| |||||| ||||| || Sbjct 11213570 TGAG------CGGGGGCCAGGGCAAGTCCCCGTTCCTGCCGATACCCATGTTCTGG-GAC 11213518 Query 112318 ACGGCCACGATACCGTTCAGA 112338 ||||| ||||| | ||||||| Sbjct 11213517 ACGGCGACGATGCAGTTCAGA 11213497 >seq26 Length=19343008 Score = 118 bits (130), Expect = 9e-22 Identities = 185/260 (71%), Gaps = 10/260 (4%) Strand=Plus/Plus Query 112081 TGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTC 112140 |||||||| || || | || ||||| || ||||| |||| || | |||||| || Sbjct 10932912 TGAGCTCCTTGGGGAGGTCCCTTGAGCTCTCTACTGAGTACTATATTAAGTCTGTCTTTC 10932971 Query 112141 AGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTC 112200 | ||||| |||||| || || ||||||||||| ||||| |||||||||| ||||| ||| Sbjct 10932972 AAAGGTCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCTACCCATTACCACCAGTTTC 10933031 Query 112201 TGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGCA 112259 || || ||| ||||| | || | |||| | ||| | || | || || || || | Sbjct 10933032 TGTTTACCTTCCACTGAGGTGGTTGTGGTC-ATTCTCTGGAAATAGTTGAATTCATTCCT 10933090 Query 112260 AAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACACA 112318 ||| ||| ||| |||| || ||||| | ||||| |||||| ||||| ||| Sbjct 10933091 GAGT------GGAGACCAGGGCAAGTCCCCGTTCCTGCCGATACCCATGTTCTGG-GACA 10933143 Query 112319 CGGCCACGATACCGTTCAGA 112338 ||| ||||| | ||||||| Sbjct 10933144 TGGCGACGATGCAGTTCAGA 10933163 >seq10 Length=29551940 Score = 118 bits (130), Expect = 9e-22 Identities = 179/248 (72%), Gaps = 10/248 (4%) Strand=Plus/Minus Query 112093 GGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTC 112152 || || || || || || || ||||| |||| || || |||||| ||| ||| | |||| Sbjct 24703272 GGAGGTTCCTTGAGTTCTCTACTGAGTACTATATTAATTCTGTCTTTCAAAGGGCGATTC 24703213 Query 112153 TTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCTCTG 112212 || || || ||||||||||| |||||||||| ||||| ||||| ||||| || ||| Sbjct 24703212 TTCTCAGGAATGGAGAACCAGGTCTTTCTACTCATTACCACCAGATTCTGTTTACCTTCC 24703153 Query 112213 ACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGCAAAGTCTCGCAGG 112271 ||||| | || | |||| | ||| | |||| || || || || | | ||||| Sbjct 24703152 ACTGAGGTGGTTGTGGTC-ATTCTCTGGAAGTAGTTGAATTCATTCCTGA-----GCAGG 24703099 Query 112272 ATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACACACGGCCACGATAC 112330 |||| |||| || ||||| | ||||| |||||| ||||| ||||||| || || | Sbjct 24703098 -GGCCAGGGCAAGTCCCCGTTCCTGCCGATACCCATGTTCTGG-GACACGGCGACAATGC 24703041 Query 112331 CGTTCAGA 112338 ||||||| Sbjct 24703040 AGTTCAGA 24703033 >seq94 Length=11208488 Score = 109 bits (120), Expect = 4e-19 Identities = 184/260 (71%), Gaps = 10/260 (4%) Strand=Plus/Plus Query 112081 TGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTC 112140 |||||||| || || || || || | || ||||| |||| || || |||||| || Sbjct 6850001 TGAGCTCCTTGGGGAGGTTCCTTGAGTTTGCTACTGAGTACTATATTAATTCTGTCTTTC 6850060 Query 112141 AGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTC 112200 | ||||| |||||| || || ||||||||||| ||||| |||||||||| ||||| ||| Sbjct 6850061 AAAGGTCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCTACCCATTACCACCAGATTC 6850120 Query 112201 TGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGCA 112259 ||||| ||| ||||| | || | |||| | ||| | || | || || || || | Sbjct 6850121 TGCTTACCTTCCACTGAGGTGGTTGTGGTC-ATTCTCTGGAAATAGTTGAATTCATTCCT 6850179 Query 112260 AAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACACA 112318 | || || | ||| |||| || | || | ||||| |||||| ||||| ||| Sbjct 6850180 GA-----GCGGGGT-CCAGGGCAAGTCCCTATTCCTGCCGATACCCATGTTCTGG-GACA 6850232 Query 112319 CGGCCACGATACCGTTCAGA 112338 | || ||||| | ||||||| Sbjct 6850233 CAGCGACGATGCAGTTCAGA 6850252 >seq125 Length=9353109 Score = 107 bits (118), Expect = 2e-18 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 112080 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 112139 ||||||||| || || || || || || || ||||| |||| || || |||||| | Sbjct 7288467 ATGAGCTCCTTGGGGAGGTTCCTTGAGTTCTCTACTGAGTACTATATTAATTCTGTCTTT 7288526 Query 112140 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 112199 || ||| | |||||| || || ||||||||||||||||| |||||||||| ||||| || Sbjct 7288527 CAAAGGGCGATTCTTCTCAGGAATGGAGAACCAAGTCTTCCTACCCATTACCACCAGATT 7288586 Query 112200 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCA 112231 ||| || ||| ||||| | || | ||||| Sbjct 7288587 CTGTTTACCTTCCACTGAGGTGGTTGTGGTCA 7288618 >seq126 Length=8042663 Score = 105 bits (116), Expect = 5e-18 Identities = 181/259 (70%), Gaps = 9/259 (3%) Strand=Plus/Plus Query 112081 TGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTC 112140 |||||||| || || || | || || || ||||| ||| || || |||||| || Sbjct 3548731 TGAGCTCCTTGGGGAGGTTCCTCGAGTTCTCTACTGAGTCCTATATTAATTCTGTCTTTC 3548790 Query 112141 AGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTC 112200 | ||||| ||||| || || ||||||||||| ||||| ||||||||| ||||| ||| Sbjct 3548791 AAAGGTCACTTCTTCTCAGGAATGGAGAACCAGGTCTTCTTACCCATTACCACCAGATTC 3548850 Query 112201 TGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTCGAAAGTGTTTAAAATCTTTGCAA 112260 || || ||| ||||| | || | |||| || | |||| || || || || | Sbjct 3548851 TGTTTACCTTCCACTGAGGTGGTTGTGGTCTTCTCT-GGAAGTAGTTGAATTCATTCCTG 3548909 Query 112261 AGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACACAC 112319 ||| || |||| |||| || ||||| | | ||| |||||| ||||| |||| Sbjct 3548910 AGT------GGGGGCCAGGGCAAGTCCCCGTTCCTGCTGATACCCATGTTCTGG-GACAC 3548962 Query 112320 GGCCACGATACCGTTCAGA 112338 ||| ||||| | ||||||| Sbjct 3548963 GGCGACGATGCAGTTCAGA 3548981 >seq20 Length=23447253 Score = 104 bits (114), Expect = 2e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 112080 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 112139 ||||||||| || || || || || || || ||||| |||| || || |||||| | Sbjct 11127143 ATGAGCTCCTTGGGGAGGTTCCTTGAGTTCTCTACTGAGTACTATATTAATTCTGTCTTT 11127202 Query 112140 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 112199 || ||| | |||||| || || ||||||||||| ||||| |||||||||| ||||| || Sbjct 11127203 CAAAGGGCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCTACCCATTACCACCAGATT 11127262 Query 112200 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCA 112231 ||| || ||| ||||| | || | ||||| Sbjct 11127263 CTGTTTACCTTCCACTGAGGTGGTTGTGGTCA 11127294 >seq18 Length=24717988 Score = 104 bits (114), Expect = 2e-17 Identities = 101/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 112102 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 112161 || ||||| || ||||| |||| || || |||||| ||| ||||| |||||| || || Sbjct 8895610 TTGAGCTCTCTACTGAGTACTATATTAATTCTGTCTTTCAAAGGTCAATTCTTCTCAGGA 8895669 Query 112162 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCTCTGACTGAAGAC 112221 ||||||||||| || || |||||||||| ||| | ||||| |||||| |||||| | Sbjct 8895670 ATGGAGAACCAGGTATTCCTACCCATTACCACAAGATTCTGTTTGCCTTCGACTGAGGTG 8895729 Query 112222 GTAGCGGTCA 112231 || | ||||| Sbjct 8895730 GTTGTGGTCA 8895739 >seq3487 Length=3565 Score = 96.9 bits (106), Expect = 3e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 30241 TCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCT 30300 |||| || || | ||| || |||| ||||||||||| || || || ||| | |||| Sbjct 1451 TCCAGGAAATCCCGGGACCCACTGGCTTCCCAGATCTTCACTCCTTTGGAGGACAACTCT 1392 Query 30301 TTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAG 30360 |||| ||||| || || ||| ||||||||||||||||||| || ||||||| | Sbjct 1391 TTGGCATTTGTAGATCCCTTGATAAACCACAGCAGCTCCTCCAGAACACCCTTCCAGAGC 1332 Query 30361 ACCCTCTTGGTCGTGAGGAGGGGAAA 30386 || | || |||||| || |||||||| Sbjct 1331 ACACGCTAGGTCGTCAGCAGGGGAAA 1306 >seq129 Length=8405773 Score = 96.9 bits (106), Expect = 3e-15 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 112102 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 112161 || || || || ||||| |||| || || |||||| ||| ||| | |||||| || || Sbjct 1120959 TTGAGTTCTCTACTGAGTACTATATTAATTCTGTCTTTCAAAGGGCGATTCTTCTCAGGA 1121018 Query 112162 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209 ||||||||||||||||| |||||||||| ||||| ||||| || ||| Sbjct 1121019 ATGGAGAACCAAGTCTTCCTACCCATTACCACCAGATTCTGTTTACCT 1121066 >seq111 Length=10255479 Score = 96.9 bits (106), Expect = 3e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 112081 TGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTC 112140 |||||||| || || || || || || | ||||| |||| || || |||||| || Sbjct 169013 TGAGCTCCTTGGGGAGGTTCCTTGAGTTCTCCACTGAGTACTATATTAATTCTGTCTTTC 169072 Query 112141 AGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTC 112200 | ||| | |||||| || || ||||||||||| ||||| |||| ||||| ||||| ||| Sbjct 169073 AAAGGGCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCTACTCATTACCACCAGATTC 169132 Query 112201 TGCTTGCCTCTGACTGAAGACGTAGCGGTCA 112231 || || ||| ||||||| || | ||||| Sbjct 169133 TGTTTACCTTCCACTGAAGTGGTTGTGGTCA 169163 >seq7 Length=34356042 Score = 96.9 bits (106), Expect = 3e-15 Identities = 166/236 (70%), Gaps = 10/236 (4%) Strand=Plus/Plus Query 112105 AGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATG 112164 || || || ||||| |||| || || |||||| ||| ||| | |||||| || | ||| Sbjct 4878621 AGTTCTCTACTGAGTACTATATTAATTCTGTCTTTCAAAGGGCGATTCTTCTCAAGAATG 4878680 Query 112165 GAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCTCTGACTGAAGACGTA 112224 |||||||| ||||| |||||||||| ||||| ||||| || ||| ||||| | || Sbjct 4878681 GAGAACCAGGTCTTCCTACCCATTACCACCAGATTCTGTTTACCTTCCACTGAGGTGGTT 4878740 Query 112225 GCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGCAAAGTCTCGCAGGATGCCACGGCAG 112283 | |||| | ||| | |||| || || || || | ||| || |||| | || Sbjct 4878741 GTGGTC-ATTCTCTGGAAGTAGTTGAATTCATTCCTGAGT------GGGGGCCAAGACAA 4878793 Query 112284 ATCTCCGTTGTTCCCGATGCCCATG-TCTGGACACACGGCCACGATACCGTTCAGA 112338 || | ||| | ||||| |||||| ||||| |||| || || || | ||||||| Sbjct 4878794 GTCCCTGTTCCTGCCGATACCCATGATCTGG-GACACAGCGACAATGCAGTTCAGA 4878848 >seq272 Length=2648510 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 112081 TGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTC 112140 |||||||| || || || || || || || ||||| |||| || || |||||| || Sbjct 1736428 TGAGCTCCTTGGGGAGGTTCCTTGAGTTCTCTACTGAGTACTATATTAATTCTGTCTTTC 1736487 Query 112141 AGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTC 112200 | ||| | |||||| || || ||||||||||| ||||| |||||||||| ||||| ||| Sbjct 1736488 AAAGGGCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCTACCCATTACCACCAGATTC 1736547 Query 112201 TGCTT 112205 || || Sbjct 1736548 TGTTT 1736552 >seq12 Length=28755977 Score = 84.2 bits (92), Expect = 2e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 112081 TGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTC 112140 |||||||| || || || || || || || ||||| | | || | |||||| || Sbjct 14868336 TGAGCTCCTTGGGGAGGTTCCTTGAGTTCTCTACTGAGTATTTTATTAAGTCTGTCTTTC 14868395 Query 112141 AGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTC 112200 | ||||| |||||| || || ||||||||||| | ||| || ||||||| ||||| ||| Sbjct 14868396 AAAGGTCAATTCTTCTCAGGAATGGAGAACCAGGGCTTCCTGCCCATTACCACCAGATTC 14868455 Query 112201 TGCTTGCCTCTGACTGAAGACGTAGCGGTCA 112231 || || ||| ||||| | || | ||||| Sbjct 14868456 TGTTTACCTTCCACTGAGGTGGTTGTGGTCA 14868486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408582067507355