Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Octodon_20degus_20[refseq_20GCF_5F000260255.1_202012-05-01]
7,135 sequences; 2,995,889,303 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq74 390 9e-104
seq107 255 5e-63
seq109 232 5e-56
seq82 210 2e-49
seq75 138 9e-28
seq11 129 5e-25
seq26 118 9e-22
seq10 118 9e-22
seq94 109 4e-19
seq125 107 2e-18
seq126 105 5e-18
seq20 104 2e-17
seq18 104 2e-17
seq3487 96.9 3e-15
seq129 96.9 3e-15
seq111 96.9 3e-15
seq7 96.9 3e-15
seq272 95.1 1e-14
seq12 84.2 2e-11
>seq74
Length=13126430
Score = 390 bits (432), Expect = 9e-104
Identities = 463/624 (74%), Gaps = 5/624 (1%)
Strand=Plus/Plus
Query 29765 TGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGT 29824
||||||||| || || || | | ||||||||||||||||| | | ||||| |||||
Sbjct 9227889 TGGGAAAGGC-CTTGGTTCTCGTTGAAGCTGAGTCTTCAGCGGCTTGATGTGATTCAGGT 9227947
Query 29825 AGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAG 29884
||| || |||||||||| ||||| || || ||||| || | || || |||||||| |
Sbjct 9227948 AGATATGTGCGTCTCCCAAAGTGTGCACGAAGTCTCCTGGCTTCAGGCCTGTGACGTGCG 9228007
Query 29885 CCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGT 29944
| | |||||| ||||| || | | ||||||||||||| |||||||| || || |||||||
Sbjct 9228008 CGACCATGTAGGTGAGCAGCGCGCAGCTGGCGATGTTGAAGGGTACGCCCAGGCCCATGT 9228067
Query 29945 CCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACA 30004
|||| |||| |||||| ||||| || || ||||| |||| |||||| ||||| ||||
Sbjct 9228068 CCCCTGACCGCTGGTACAGCTGGCAGGACAGCTCCCCGTTCACCACGTAGAACTGGCACA 9228127
Query 30005 TGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGA 30064
||||||||| ||||| || ||||| || | ||||| ||||||||||| |||| ||
Sbjct 9228128 GGGTGTGGCAGGGAGGCAGCGCCATCAGAGGGAGATCTTTTGGGTTCCAGGCACACATGA 9228187
Query 30065 TGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCA 30124
|||| | ||||| | |||| | | ||||| || | |||| |||||||| || |
Sbjct 9228188 TGATCCTTCTGTCGTTAGGGTCGGTTTTGATGGTGTTGATCACGTTCTGCAGCTGGTCAA 9228247
Query 30125 CCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACT 30184
| || |||||||| |||| | | || |||| ||||| ||||||||||||||||
Sbjct 9228248 CTCCTTGACCCGAGTAATCTGAGTCCGTATCTTTGTAGTCTGCCCCGAAATGCCTCCACT 9228307
Query 30185 GGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCG--AAGCCCCTCTTGTC 30242
|||| || || || || |||||||| || |||| | ||| | || ||| ||||
Sbjct 9228308 GGAAGCCATAGACGGGGCCCAGGTCCCCTTCTTTGC--GGCTAGAAAACCCCAGGCTGTC 9228365
Query 30243 CAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTT 30302
|| || || | ||| || ||||| ||||||||||| || || || || ||||| ||
Sbjct 9228366 CAGGAAATCCCGGGACCCATTGGCATCCCAGATCTTCACTCCTTTGGATGACAGCTCCTT 9228425
Query 30303 GGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGAC 30362
|| ||||| || || ||| |||||||||||||| |||| | ||||||| || ||
Sbjct 9228426 GGCATTTGTAGATCCCTTGATAAACCACAGCAGCTCTTCCAGAATACCCTTCCAGAATAC 9228485
Query 30363 CCTCTTGGTCGTGAGGAGGGGAAA 30386
| |||||| || || ||||||||
Sbjct 9228486 ACGCTTGGTGGTCAGCAGGGGAAA 9228509
>seq107
Length=10030941
Score = 255 bits (282), Expect = 5e-63
Identities = 392/558 (70%), Gaps = 21/558 (4%)
Strand=Plus/Minus
Query 29791 AGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGG 29850
|||||||| |||||| | || | ||||| |||||||| || || ||||||| || ||
Sbjct 3003366 AGCTGAGTTTTCAGCAGCTCAATGTGATTCAGGTAGATATGTGCATCTCCCAAAGTATGC 3003307
Query 29851 ACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAG 29910
||||| |||| |||| || || | || ||| ||||| || | ||||
Sbjct 3003306 ACAAAGCCTCC--------------TGACATGCGCGACCAAGTAGGTGAGCAGCGCGTAG 3003261
Query 29911 CTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTG--GTAGAGCTGAC 29968
||| ||||||| ||||| || || || ||||| ||||| |||| ||| ||| |||| |
Sbjct 3003260 CTGACGATGTTGAAGGGCACTCCCAGGCCCATATCCCCTGACCACTGTGGTACGGCTGGC 3003201
Query 29969 ACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCA 30028
| || ||||| || | ||||||||||| |||| ||||||||| ||||| |||||||
Sbjct 3003200 AGGACAGCTCCCCATTCACCACGTAAAACTAGCACAGGGTGTGGCAGGGAGGCAGAGCCA 3003141
Query 30029 TGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGT 30088
| || | ||||| |||| ||||| |||| |||||| | ||||| || ||||||
Sbjct 3003140 TCAGAGGGAGATCTTTCAGGTTTCAGGCACACATGATGATCCTTCTGTCATCAGGGTTGG 3003081
Query 30089 TCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCC 30148
| ||||| || | |||| |||||||| || | || || ||||| ||||
Sbjct 3003080 TTTTGATGGTGTTGATCACGTTCTGCAGCTGGTCATCTCCTTGACCTGAGTAATCTGAGT 3003021
Query 30149 TCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGT 30208
||| | ||| || || | |||||||||||||||||| || | || || ||||||
Sbjct 3003020 CCATACCTTCGTAGTCAGCCCTGAAATGCCTCCACTGGAAGCCACAGACGGGGCCCAGG- 3002962
Query 30209 CTCCCTCTTCCCTGT-GCTCG--AAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGG 30265
|||| ||||| || ||| | || ||| | |||| || || | ||| || ||||
Sbjct 3002961 -TCCCCCTTCCTGGTGGCTAGAAAACCCCAGGCTATCCAGGAAATCCCGGGACCCATTGG 3002903
Query 30266 CGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGA 30325
| ||||||||||| || || || || ||||| |||| |||| | || ||| |
Sbjct 3002902 CATCCCAGATCTTCACTCCTTTGGATGACAGCTCCTTGGCATTTGCATATCCCTTGATAA 3002843
Query 30326 ACCACAGCAGCTCCTCCA 30343
|||||||||| |||||||
Sbjct 3002842 ACCACAGCAGTTCCTCCA 3002825
>seq109
Length=10228628
Score = 232 bits (256), Expect = 5e-56
Identities = 431/625 (69%), Gaps = 17/625 (3%)
Strand=Plus/Plus
Query 29765 TGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGT 29824
||||||||| || || || | || |||||||| |||||| | || ||||| ||||
Sbjct 4836432 TGGGAAAGGC-CTTGGTTCTCGCTGAAGCTGAGTTTTCAGCTGCTCAGTGTGATTTAGGT 4836490
Query 29825 AGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGG-TTCTAGCCCGGTGACGTGA 29883
||| | || |||| || || || ||||| || || || ||| |||| | ||||||
Sbjct 4836491 AGATAGGTGCATCTCTCAAAGTATGCACAAAGTCACCTGGCTTCAGGCCCCGCGACGTGC 4836550
Query 29884 GCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATG 29943
|| | || ||| ||||| | |||||||| || | | |||| || || || ||||||
Sbjct 4836551 GCGA-CAAGTAGGTGAGCCCCGCGTAGCTGGTGAGGCTGCAGGGCACGCCCAGGCCCATG 4836609
Query 29944 TCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACAC 30003
||||| |||| ||| || ||||| || || ||||| | | |||| | | |||
Sbjct 4836610 TCCCCTGACCGCTGCTACAGCTGGCAGGACAGCTCCCTAT---TCACC-AGAGCTG---- 4836661
Query 30004 ATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACG 30063
||||||||| ||||| || |||| || | ||||| |||||||||| | ||| |
Sbjct 4836662 --GGTGTGGCAGGGAGGCAGCGCCACCAGAGGGAGATCTTTCGGGTTCCAGGAGTACATG 4836719
Query 30064 ATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCC 30123
||||| | || || || |||||| | ||| || | ||| |||||||| |
Sbjct 4836720 ATGATCCTTCTATCATCAGGGTTGGTTTTGACAGCGTTGATCATGTTCTGCAGCTGGCCT 4836779
Query 30124 ACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCAC 30183
|| || |||| | | |||| |||||| |||| || || ||||||||||||||
Sbjct 4836780 ACTCCTTGACCCGGGCAATCTGAGTCCATGTCTTTGTAGTCAGCCCCGAAATGCCTCCAG 4836839
Query 30184 TGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCT--TGT 30241
|||| || || || || ||||||| ||||| | ||| || ||| ||| |||
Sbjct 4836840 GGGAAGCCATAGACGGGGCCCAGGTGCCCCTCCTGGCTG--CTAGAACACCCCAGGCTGT 4836897
Query 30242 CCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTT 30301
||| || | | ||| ||| |||| ||||||||||| || || || || |||||||
Sbjct 4836898 CCAGGAAACCCCAGGACCCGCTGGCATCCCAGATCTTCACTCCTTTGGATGACAGCTCTT 4836957
Query 30302 TGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGA 30361
|| || || || | ||| |||||||| |||| |||| ||| ||||||| || |
Sbjct 4836958 TGACATTAGTAGATACCTTGATAAACCACAGTGGCTCGTCCAGGACACCCTTCCAGAACA 4837017
Query 30362 CCCTCTTGGTCGTGAGGAGGGGAAA 30386
| | |||||| || || ||||||||
Sbjct 4837018 CACACTTGGTTGTCAGCAGGGGAAA 4837042
>seq82
Length=12555031
Score = 210 bits (232), Expect = 2e-49
Identities = 480/715 (67%), Gaps = 18/715 (3%)
Strand=Plus/Plus
Query 29677 ATGGCGGGATGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGG 29736
|||||||| || || || || || ||||| |||| | || | | ||||| || |
Sbjct 10556077 ATGGCGGGGTGGGGATCATACCCTTCCAGTTGGAAACCTTCAACTGTGAAGTCATCGATT 10556136
Query 29737 TTCTCCACCCTCCTGTTTATCCTCAG-TGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTG 29795
||||| || | | || | || | ||||||||| || | || | | | |||
Sbjct 10556137 TTCTCAACTTTTCAAAGGATTTTGAGCTTTGGGAAAGGC-CTCAGTTCTCATTGAATCTG 10556195
Query 29796 AGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAA 29855
|| |||||| | || | ||||| || ||||| || |||||| ||| || || || ||
Sbjct 10556196 GGTTTTCAGCAGCTCAATGTGATTCAAGTAGATATGTGCGTCTGCCAATGTATGCACCAA 10556255
Query 29856 CTCTCCCGG-TTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGG 29914
|| || | ||| |||||| || ||| | | |||||| ||| || ||||||||
Sbjct 10556256 GTCACCTGCCTTCAAGCCCGC-GATGTGCGTGACCATGTAGTGGAGCAGCCCGTAGCTGG 10556314
Query 29915 CGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGA 29974
||||||| ||||| || || || |||| || | | |||| |||||| ||||| | |
Sbjct 10556315 CGATGTTGAAGGGCACACCCAGGCCCACGTTCTCTGACCGCTGGTATAGCTGGCTC---- 10556370
Query 29975 GCTCTCCGTCGCTCACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGC 30034
||| || | |||||| ||||| |||| || |||||| ||||| || ||||| ||
Sbjct 10556371 ---CTCGTTCAC-CACGTAGAACTGGCACAGGGCGTGGCAGGGAGGCAGGGCCATCAGAG 10556426
Query 30035 CCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA 30094
| ||| | ||||||||||| |||| |||||| | |||| || ||||| |||
Sbjct 10556427 GGAGATCTGTTGGGTTCCAGGCACACATGATGATACTTCTGTTGTCAGGGTTAACTTTGA 10556486
Query 30095 TGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGT 30154
| || | || || |||||||| | || || || |||| |||| ||| |
Sbjct 10556487 CGGTGTTGATCGCATTCTGCAGCTGGTTAACTCCTTGACCTAAGTAATCTGAGTCCATAT 10556546
Query 30155 CCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCT 30214
| |||| || || | |||| || ||||||||| | || || || ||||||| ||
Sbjct 10556547 CTTTGTAGTCAGCACAAAAATACCACCACTGGAAGTCATAGACAGGGCCCAGGT---CCC 10556603
Query 30215 CTTCCCTGTGCT---CGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCC 30271
|| || ||| | || ||| ||| || || ||| || ||||| ||||
Sbjct 10556604 CTGCCTGGTGGTTAGAAAACCCCAGGCAGTCTGGGAAATCCTGGGACCCATTGGCATCCC 10556663
Query 30272 AGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACA 30331
||||||| || ||||| | |||||||||| || | || || ||| |||||||
Sbjct 10556664 AGATCTTCACTCCCTTGGATGGCAGCTCTTTGGCACTTATAGATCCCTTGATAAACCACA 10556723
Query 30332 GCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30386
|||||||||||| || ||||||| || || | ||||| || || ||||||||
Sbjct 10556724 GCAGCTCCTCCAGGATACCCTTCCAGAACACACGTTTGGTTGTCAGCAGGGGAAA 10556778
Score = 129 bits (142), Expect = 5e-25
Identities = 186/260 (72%), Gaps = 8/260 (3%)
Strand=Plus/Minus
Query 112080 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 112139
||||||||| || || || || || || || ||||| |||| || || |||||| |
Sbjct 3134537 ATGAGCTCCTTGGGGAGGTTCCTTGAGTTCTCTACTGAGTACTATATTAATTCTGTCTTT 3134478
Query 112140 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 112199
|| ||| | |||||| || || ||||||||||| ||||| |||||||||| ||||| ||
Sbjct 3134477 CAAAGGGCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCTACCCATTACCACCAGATT 3134418
Query 112200 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 112258
||| || ||| ||||| | || | |||| | ||| | |||| || || || || |
Sbjct 3134417 CTGTTTACCTTCCACTGAGGTGGTTGTGGTC-ATTCTCTGGAAGTAGTTGAATTCATTCC 3134359
Query 112259 AAAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATGTCTGGACACA 112318
|| || |||| |||| |||||||| | ||||| ||||||| || |||
Sbjct 3134358 TGAG------CGGGGGCCAGGGCAAGTCTCCGTTCCTGCCGATACCCATGTTCTGAGACA 3134305
Query 112319 CGGCCACGATACCGTTCAGA 112338
|||| ||||| | |||||||
Sbjct 3134304 CGGCGACGATGCAGTTCAGA 3134285
>seq75
Length=11870250
Score = 138 bits (152), Expect = 9e-28
Identities = 129/164 (79%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 29869 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 29928
|| || |||||||| || | |||||| ||||| || | |||||||||||||| |||||
Sbjct 4085023 AGGCCCGTGACGTGCGCGACCATGTAGGTGAGCAGCGCATAGCTGGCGATGTTGAAGGGC 4084964
Query 29929 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 29988
|| || || ||||||||||| |||| |||||| ||||| || || ||||| || | |
Sbjct 4084963 ACGCCCAGGCCCATGTCCCCTGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATTCACC 4084904
Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAG 30032
||||| ||||| |||| || |||||| ||||| || ||||| ||
Sbjct 4084903 ACGTAGAACTGGCACAGGGCGTGGCAGGGAGGCAGCGCCATCAG 4084860
Score = 89.7 bits (98), Expect = 4e-13
Identities = 123/170 (72%), Gaps = 4/170 (2%)
Strand=Plus/Minus
Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209
||| || |||| || || |||||||||||||||||||| || || || || ||||||||
Sbjct 4081483 CATATCTTTGTAATCAGCCCCGAAATGCCTCCACTGGAAGCCATAGACGGGGCCCAGGTC 4081424
Query 30210 TCCCTCTTCCCTGTGCTCG--AAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCG 30267
|| || | | ||| | || ||| |||||| || || | ||| || |||||
Sbjct 4081423 CCCTTCCTGGC--GGCTAGAAAACCCCAGGCTGTCCAGGAAATCCCGGGACCCATTGGCA 4081366
Query 30268 TCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 30317
|||||||||||||| || || || ||||| |||| ||||| || ||
Sbjct 4081365 TCCCAGATCTTTACTCCTTTGGATGACAGCTCCTTGGCATTTGTAGATCC 4081316
>seq11
Length=28182674
Score = 129 bits (142), Expect = 5e-25
Identities = 188/261 (72%), Gaps = 10/261 (4%)
Strand=Plus/Minus
Query 112080 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 112139
||||||||| || || || || || || || ||||| |||| || || |||||| |
Sbjct 11213749 ATGAGCTCCTTGGGGAGGTTCCTTGAGTTCTCTACTGAGTACTATATTAATTCTGTCTTT 11213690
Query 112140 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 112199
|| ||| | |||||| || || ||||||||||||||||| |||||||||| ||||| ||
Sbjct 11213689 CAAAGGGCGATTCTTCTCAGGAATGGAGAACCAAGTCTTCCTACCCATTACCACCAGATT 11213630
Query 112200 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 112258
||| || ||| ||||| | || | |||| | ||| | |||| || || || || |
Sbjct 11213629 CTGTTTACCTTCCACTGAGGTGGTTGTGGTC-ATTCTCTGGAAGTAGTTGAATTCATTCC 11213571
Query 112259 AAAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACAC 112317
|| || |||| |||| || ||||| | ||||| |||||| ||||| ||
Sbjct 11213570 TGAG------CGGGGGCCAGGGCAAGTCCCCGTTCCTGCCGATACCCATGTTCTGG-GAC 11213518
Query 112318 ACGGCCACGATACCGTTCAGA 112338
||||| ||||| | |||||||
Sbjct 11213517 ACGGCGACGATGCAGTTCAGA 11213497
>seq26
Length=19343008
Score = 118 bits (130), Expect = 9e-22
Identities = 185/260 (71%), Gaps = 10/260 (4%)
Strand=Plus/Plus
Query 112081 TGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTC 112140
|||||||| || || | || ||||| || ||||| |||| || | |||||| ||
Sbjct 10932912 TGAGCTCCTTGGGGAGGTCCCTTGAGCTCTCTACTGAGTACTATATTAAGTCTGTCTTTC 10932971
Query 112141 AGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTC 112200
| ||||| |||||| || || ||||||||||| ||||| |||||||||| ||||| |||
Sbjct 10932972 AAAGGTCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCTACCCATTACCACCAGTTTC 10933031
Query 112201 TGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGCA 112259
|| || ||| ||||| | || | |||| | ||| | || | || || || || |
Sbjct 10933032 TGTTTACCTTCCACTGAGGTGGTTGTGGTC-ATTCTCTGGAAATAGTTGAATTCATTCCT 10933090
Query 112260 AAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACACA 112318
||| ||| ||| |||| || ||||| | ||||| |||||| ||||| |||
Sbjct 10933091 GAGT------GGAGACCAGGGCAAGTCCCCGTTCCTGCCGATACCCATGTTCTGG-GACA 10933143
Query 112319 CGGCCACGATACCGTTCAGA 112338
||| ||||| | |||||||
Sbjct 10933144 TGGCGACGATGCAGTTCAGA 10933163
>seq10
Length=29551940
Score = 118 bits (130), Expect = 9e-22
Identities = 179/248 (72%), Gaps = 10/248 (4%)
Strand=Plus/Minus
Query 112093 GGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTC 112152
|| || || || || || || ||||| |||| || || |||||| ||| ||| | ||||
Sbjct 24703272 GGAGGTTCCTTGAGTTCTCTACTGAGTACTATATTAATTCTGTCTTTCAAAGGGCGATTC 24703213
Query 112153 TTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCTCTG 112212
|| || || ||||||||||| |||||||||| ||||| ||||| ||||| || |||
Sbjct 24703212 TTCTCAGGAATGGAGAACCAGGTCTTTCTACTCATTACCACCAGATTCTGTTTACCTTCC 24703153
Query 112213 ACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGCAAAGTCTCGCAGG 112271
||||| | || | |||| | ||| | |||| || || || || | | |||||
Sbjct 24703152 ACTGAGGTGGTTGTGGTC-ATTCTCTGGAAGTAGTTGAATTCATTCCTGA-----GCAGG 24703099
Query 112272 ATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACACACGGCCACGATAC 112330
|||| |||| || ||||| | ||||| |||||| ||||| ||||||| || || |
Sbjct 24703098 -GGCCAGGGCAAGTCCCCGTTCCTGCCGATACCCATGTTCTGG-GACACGGCGACAATGC 24703041
Query 112331 CGTTCAGA 112338
|||||||
Sbjct 24703040 AGTTCAGA 24703033
>seq94
Length=11208488
Score = 109 bits (120), Expect = 4e-19
Identities = 184/260 (71%), Gaps = 10/260 (4%)
Strand=Plus/Plus
Query 112081 TGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTC 112140
|||||||| || || || || || | || ||||| |||| || || |||||| ||
Sbjct 6850001 TGAGCTCCTTGGGGAGGTTCCTTGAGTTTGCTACTGAGTACTATATTAATTCTGTCTTTC 6850060
Query 112141 AGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTC 112200
| ||||| |||||| || || ||||||||||| ||||| |||||||||| ||||| |||
Sbjct 6850061 AAAGGTCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCTACCCATTACCACCAGATTC 6850120
Query 112201 TGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGCA 112259
||||| ||| ||||| | || | |||| | ||| | || | || || || || |
Sbjct 6850121 TGCTTACCTTCCACTGAGGTGGTTGTGGTC-ATTCTCTGGAAATAGTTGAATTCATTCCT 6850179
Query 112260 AAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACACA 112318
| || || | ||| |||| || | || | ||||| |||||| ||||| |||
Sbjct 6850180 GA-----GCGGGGT-CCAGGGCAAGTCCCTATTCCTGCCGATACCCATGTTCTGG-GACA 6850232
Query 112319 CGGCCACGATACCGTTCAGA 112338
| || ||||| | |||||||
Sbjct 6850233 CAGCGACGATGCAGTTCAGA 6850252
>seq125
Length=9353109
Score = 107 bits (118), Expect = 2e-18
Identities = 115/152 (76%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 112080 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 112139
||||||||| || || || || || || || ||||| |||| || || |||||| |
Sbjct 7288467 ATGAGCTCCTTGGGGAGGTTCCTTGAGTTCTCTACTGAGTACTATATTAATTCTGTCTTT 7288526
Query 112140 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 112199
|| ||| | |||||| || || ||||||||||||||||| |||||||||| ||||| ||
Sbjct 7288527 CAAAGGGCGATTCTTCTCAGGAATGGAGAACCAAGTCTTCCTACCCATTACCACCAGATT 7288586
Query 112200 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCA 112231
||| || ||| ||||| | || | |||||
Sbjct 7288587 CTGTTTACCTTCCACTGAGGTGGTTGTGGTCA 7288618
>seq126
Length=8042663
Score = 105 bits (116), Expect = 5e-18
Identities = 181/259 (70%), Gaps = 9/259 (3%)
Strand=Plus/Plus
Query 112081 TGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTC 112140
|||||||| || || || | || || || ||||| ||| || || |||||| ||
Sbjct 3548731 TGAGCTCCTTGGGGAGGTTCCTCGAGTTCTCTACTGAGTCCTATATTAATTCTGTCTTTC 3548790
Query 112141 AGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTC 112200
| ||||| ||||| || || ||||||||||| ||||| ||||||||| ||||| |||
Sbjct 3548791 AAAGGTCACTTCTTCTCAGGAATGGAGAACCAGGTCTTCTTACCCATTACCACCAGATTC 3548850
Query 112201 TGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTCGAAAGTGTTTAAAATCTTTGCAA 112260
|| || ||| ||||| | || | |||| || | |||| || || || || |
Sbjct 3548851 TGTTTACCTTCCACTGAGGTGGTTGTGGTCTTCTCT-GGAAGTAGTTGAATTCATTCCTG 3548909
Query 112261 AGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACACAC 112319
||| || |||| |||| || ||||| | | ||| |||||| ||||| ||||
Sbjct 3548910 AGT------GGGGGCCAGGGCAAGTCCCCGTTCCTGCTGATACCCATGTTCTGG-GACAC 3548962
Query 112320 GGCCACGATACCGTTCAGA 112338
||| ||||| | |||||||
Sbjct 3548963 GGCGACGATGCAGTTCAGA 3548981
>seq20
Length=23447253
Score = 104 bits (114), Expect = 2e-17
Identities = 114/152 (75%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 112080 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 112139
||||||||| || || || || || || || ||||| |||| || || |||||| |
Sbjct 11127143 ATGAGCTCCTTGGGGAGGTTCCTTGAGTTCTCTACTGAGTACTATATTAATTCTGTCTTT 11127202
Query 112140 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 112199
|| ||| | |||||| || || ||||||||||| ||||| |||||||||| ||||| ||
Sbjct 11127203 CAAAGGGCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCTACCCATTACCACCAGATT 11127262
Query 112200 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCA 112231
||| || ||| ||||| | || | |||||
Sbjct 11127263 CTGTTTACCTTCCACTGAGGTGGTTGTGGTCA 11127294
>seq18
Length=24717988
Score = 104 bits (114), Expect = 2e-17
Identities = 101/130 (78%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 112102 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 112161
|| ||||| || ||||| |||| || || |||||| ||| ||||| |||||| || ||
Sbjct 8895610 TTGAGCTCTCTACTGAGTACTATATTAATTCTGTCTTTCAAAGGTCAATTCTTCTCAGGA 8895669
Query 112162 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCTCTGACTGAAGAC 112221
||||||||||| || || |||||||||| ||| | ||||| |||||| |||||| |
Sbjct 8895670 ATGGAGAACCAGGTATTCCTACCCATTACCACAAGATTCTGTTTGCCTTCGACTGAGGTG 8895729
Query 112222 GTAGCGGTCA 112231
|| | |||||
Sbjct 8895730 GTTGTGGTCA 8895739
>seq3487
Length=3565
Score = 96.9 bits (106), Expect = 3e-15
Identities = 109/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 30241 TCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCT 30300
|||| || || | ||| || |||| ||||||||||| || || || ||| | ||||
Sbjct 1451 TCCAGGAAATCCCGGGACCCACTGGCTTCCCAGATCTTCACTCCTTTGGAGGACAACTCT 1392
Query 30301 TTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAG 30360
|||| ||||| || || ||| ||||||||||||||||||| || ||||||| |
Sbjct 1391 TTGGCATTTGTAGATCCCTTGATAAACCACAGCAGCTCCTCCAGAACACCCTTCCAGAGC 1332
Query 30361 ACCCTCTTGGTCGTGAGGAGGGGAAA 30386
|| | || |||||| || ||||||||
Sbjct 1331 ACACGCTAGGTCGTCAGCAGGGGAAA 1306
>seq129
Length=8405773
Score = 96.9 bits (106), Expect = 3e-15
Identities = 86/108 (80%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 112102 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 112161
|| || || || ||||| |||| || || |||||| ||| ||| | |||||| || ||
Sbjct 1120959 TTGAGTTCTCTACTGAGTACTATATTAATTCTGTCTTTCAAAGGGCGATTCTTCTCAGGA 1121018
Query 112162 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209
||||||||||||||||| |||||||||| ||||| ||||| || |||
Sbjct 1121019 ATGGAGAACCAAGTCTTCCTACCCATTACCACCAGATTCTGTTTACCT 1121066
>seq111
Length=10255479
Score = 96.9 bits (106), Expect = 3e-15
Identities = 112/151 (74%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 112081 TGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTC 112140
|||||||| || || || || || || | ||||| |||| || || |||||| ||
Sbjct 169013 TGAGCTCCTTGGGGAGGTTCCTTGAGTTCTCCACTGAGTACTATATTAATTCTGTCTTTC 169072
Query 112141 AGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTC 112200
| ||| | |||||| || || ||||||||||| ||||| |||| ||||| ||||| |||
Sbjct 169073 AAAGGGCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCTACTCATTACCACCAGATTC 169132
Query 112201 TGCTTGCCTCTGACTGAAGACGTAGCGGTCA 112231
|| || ||| ||||||| || | |||||
Sbjct 169133 TGTTTACCTTCCACTGAAGTGGTTGTGGTCA 169163
>seq7
Length=34356042
Score = 96.9 bits (106), Expect = 3e-15
Identities = 166/236 (70%), Gaps = 10/236 (4%)
Strand=Plus/Plus
Query 112105 AGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATG 112164
|| || || ||||| |||| || || |||||| ||| ||| | |||||| || | |||
Sbjct 4878621 AGTTCTCTACTGAGTACTATATTAATTCTGTCTTTCAAAGGGCGATTCTTCTCAAGAATG 4878680
Query 112165 GAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCTCTGACTGAAGACGTA 112224
|||||||| ||||| |||||||||| ||||| ||||| || ||| ||||| | ||
Sbjct 4878681 GAGAACCAGGTCTTCCTACCCATTACCACCAGATTCTGTTTACCTTCCACTGAGGTGGTT 4878740
Query 112225 GCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGCAAAGTCTCGCAGGATGCCACGGCAG 112283
| |||| | ||| | |||| || || || || | ||| || |||| | ||
Sbjct 4878741 GTGGTC-ATTCTCTGGAAGTAGTTGAATTCATTCCTGAGT------GGGGGCCAAGACAA 4878793
Query 112284 ATCTCCGTTGTTCCCGATGCCCATG-TCTGGACACACGGCCACGATACCGTTCAGA 112338
|| | ||| | ||||| |||||| ||||| |||| || || || | |||||||
Sbjct 4878794 GTCCCTGTTCCTGCCGATACCCATGATCTGG-GACACAGCGACAATGCAGTTCAGA 4878848
>seq272
Length=2648510
Score = 95.1 bits (104), Expect = 1e-14
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 112081 TGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTC 112140
|||||||| || || || || || || || ||||| |||| || || |||||| ||
Sbjct 1736428 TGAGCTCCTTGGGGAGGTTCCTTGAGTTCTCTACTGAGTACTATATTAATTCTGTCTTTC 1736487
Query 112141 AGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTC 112200
| ||| | |||||| || || ||||||||||| ||||| |||||||||| ||||| |||
Sbjct 1736488 AAAGGGCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCTACCCATTACCACCAGATTC 1736547
Query 112201 TGCTT 112205
|| ||
Sbjct 1736548 TGTTT 1736552
>seq12
Length=28755977
Score = 84.2 bits (92), Expect = 2e-11
Identities = 109/151 (72%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 112081 TGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTC 112140
|||||||| || || || || || || || ||||| | | || | |||||| ||
Sbjct 14868336 TGAGCTCCTTGGGGAGGTTCCTTGAGTTCTCTACTGAGTATTTTATTAAGTCTGTCTTTC 14868395
Query 112141 AGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTC 112200
| ||||| |||||| || || ||||||||||| | ||| || ||||||| ||||| |||
Sbjct 14868396 AAAGGTCAATTCTTCTCAGGAATGGAGAACCAGGGCTTCCTGCCCATTACCACCAGATTC 14868455
Query 112201 TGCTTGCCTCTGACTGAAGACGTAGCGGTCA 112231
|| || ||| ||||| | || | |||||
Sbjct 14868456 TGTTTACCTTCCACTGAGGTGGTTGTGGTCA 14868486
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408582067507355
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |