Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octodon_20degus_20[refseq_20GCF_5F000260255.1_202012-05-01] 7,135 sequences; 2,995,889,303 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq61 93.3 8e-14 >seq61 Length=12690915 Score = 93.3 bits (102), Expect = 8e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 58379 GCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATA 58438 ||| | |||||||||| | |||||||| | || || || ||||||||||| || || Sbjct 8076595 GCACTGTGGTGGTACTTCGTGTCTAAAGGAGTGGAGTATTTGGATACAGTGTTCTTTATC 8076536 Query 58439 CTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTT 58498 || ||||| || || || ||| ||| | ||||| ||||| || | ||| ||||| Sbjct 8076535 CTGAGGAAGAAAAACAACCAAGTTTCCTTCTTGCACGTGTATCACCACTGTACCATGTTC 8076476 Query 58499 ACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 ||| | | ||| | || ||||| ||| |||||||||| || Sbjct 8076475 ACTCTGTGGTGGATTGGAATTAAGTGGGTTGCAGGAGGACA 8076435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903330627013600