Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Octodon_20degus_20[refseq_20GCF_5F000260255.1_202012-05-01]
7,135 sequences; 2,995,889,303 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq48 187 4e-41
seq119 170 3e-36
seq23 170 3e-36
seq310 161 1e-33
seq45 131 2e-24
seq187 116 5e-20
seq145 100 4e-15
seq142 86.0 9e-11
seq98 86.0 9e-11
>seq48
Length=14429822
Score = 187 bits (206), Expect = 4e-41
Identities = 182/232 (78%), Gaps = 12/232 (5%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| |||| |||| || |||| |||||
Sbjct 11557701 TACAAGGTGCTGAAGCAGGTGCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 11557754
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| | |||||| |||
Sbjct 11557755 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCGTCGCGC 11557814
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACG---CGCGAGATCCAGACCGCCGTG 725090
||||||| || ||||||||| | ||| || |||| |||||||||||||| ||||||
Sbjct 11557815 CTGGCGCACTACAACAAGCG---CTCGACCGTCACGTCCCGCGAGATCCAGACGGCCGTG 11557871
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|||||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 11557872 CGCCTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 11557923
Score = 187 bits (206), Expect = 4e-41
Identities = 182/232 (78%), Gaps = 12/232 (5%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| |||| |||| || |||| |||||
Sbjct 11565962 TACAAGGTGCTGAAGCAGGTGCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 11565909
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| | |||||| |||
Sbjct 11565908 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCGTCGCGC 11565849
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACG---CGCGAGATCCAGACCGCCGTG 725090
||||||| || |||||||||| ||| || |||| |||||||||||||| ||||||
Sbjct 11565848 CTGGCGCACTACAACAAGCGCT---CGACCGTCACGTCCCGCGAGATCCAGACGGCCGTG 11565792
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|||||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 11565791 CGCCTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 11565740
Score = 185 bits (204), Expect = 1e-40
Identities = 179/229 (78%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| |||| |||| || |||| |||||
Sbjct 11535875 TACAAGGTGCTGAAGCAGGTGCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 11535928
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| | |||||| |||
Sbjct 11535929 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCGTCGCGC 11535988
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | |||||||||||||| |||||||||
Sbjct 11535989 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGCGAGATCCAGACGGCCGTGCGC 11536048
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 11536049 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 11536097
Score = 183 bits (202), Expect = 4e-40
Identities = 180/231 (78%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 724912 TCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCA 724971
||||||||||||| |||||||| |||||| |||| |||| || |||| |||
Sbjct 11594571 TCTACAAGGTGCTGAAGCAGGTACACCCCGACACCGG-----CATC-TCGTCCAAGGCCA 11594624
Query 724972 TGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC 725031
|| ||||||||||| || ||||||||||| |||| ||||||| | |||||| |
Sbjct 11594625 TGGGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCGTCGC 11594684
Query 725032 GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091
||||||||| || |||||||||| || ||| | |||||||||||||| |||||||
Sbjct 11594685 GCCTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGCGAGATCCAGACGGCCGTGC 11594744
Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||||| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 11594745 GCCTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 11594795
>seq119
Length=9167744
Score = 170 bits (188), Expect = 3e-36
Identities = 176/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
|||||||||||||||||||||||||| || || |||| || |||| |||||
Sbjct 765635 TACAAGGTGCTCAAGCAGGTGCACCCGGACAC-----GGGCATC-TCGTCCAAGGCCATG 765582
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 765581 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 765522
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | | || ||||||||||| |||||| |
Sbjct 765521 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCTCGGGAGATCCAGACGGCCGTGAGG 765462
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||| || || ||||||||||
Sbjct 765461 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCTGTGTCTGAGGGCACCA 765413
Score = 167 bits (184), Expect = 3e-35
Identities = 175/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
|||||||||||||||||||||||||| || || |||| || |||| |||||
Sbjct 696131 TACAAGGTGCTCAAGCAGGTGCACCCGGACAC-----GGGCATC-TCGTCCAAGGCCATG 696078
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 696077 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 696018
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | | || ||||||||||| || ||| |
Sbjct 696017 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCCGAGAGATCCAGACGGCAGTGAGG 695958
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||| || || ||||||||||
Sbjct 695957 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCTGTGTCTGAGGGCACCA 695909
Score = 167 bits (184), Expect = 3e-35
Identities = 175/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
|||||||||||||||||||||||||| || || |||| || |||| |||||
Sbjct 758171 TACAAGGTGCTCAAGCAGGTGCACCCGGACAC-----GGGCATC-TCGTCCAAGGCCATG 758224
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 758225 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 758284
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | | || ||||||||||| ||||| |
Sbjct 758285 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCCGGGAGATCCAGACGGCCGTCAGG 758344
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||| || || ||||||||||
Sbjct 758345 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCTGTGTCTGAGGGCACCA 758393
Score = 167 bits (184), Expect = 3e-35
Identities = 175/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
|||||||||||||||||||||||||| || || |||| || |||| |||||
Sbjct 773547 TACAAGGTGCTCAAGCAGGTGCACCCGGACAC-----GGGCATC-TCGTCCAAGGCCATG 773494
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 773493 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 773434
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | | || ||||||||||| ||||| |
Sbjct 773433 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCCGGGAGATCCAGACGGCCGTCAGG 773374
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||| || || ||||||||||
Sbjct 773373 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCTGTGTCTGAGGGCACCA 773325
Score = 167 bits (184), Expect = 3e-35
Identities = 175/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
|||||||||||||||||||||||||| || || |||| || |||| |||||
Sbjct 836631 TACAAGGTGCTCAAGCAGGTGCACCCGGACAC-----GGGCATC-TCGTCCAAGGCCATG 836684
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 836685 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 836744
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | | || ||||||||||| ||||| |
Sbjct 836745 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCCGGGAGATCCAGACGGCCGTCAGG 836804
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||| || || ||||||||||
Sbjct 836805 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCTGTGTCTGAGGGCACCA 836853
Score = 167 bits (184), Expect = 3e-35
Identities = 175/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
|||||||||||||||||||||||||| || || |||| || |||| |||||
Sbjct 901014 TACAAGGTGCTCAAGCAGGTGCACCCGGACAC-----GGGCATC-TCGTCCAAGGCCATG 901067
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 901068 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 901127
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | | || ||||||||||| ||||| |
Sbjct 901128 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCTCGGGAGATCCAGACGGCCGTCAGG 901187
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||| || || ||||||||||
Sbjct 901188 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCTGTGTCTGAGGGCACCA 901236
Score = 138 bits (152), Expect = 2e-26
Identities = 171/231 (74%), Gaps = 10/231 (4%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||||||||| || || |||| || |||| |||||
Sbjct 722129 TACAAGGTGCTGAAGCAGGTGCACCCTGACAC-----GGGCATC-TCGTCCAAGGCCATG 722076
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCG- 725032
|||||||||||||| ||||| ||||| |||| ||||||| | |||| ||||
Sbjct 722075 GGCATCATGAACTCGTTCGTCAATGACATCTTCGAGCGCATCGCGGGCAAGGC--GTCGC 722018
Query 725033 -CCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091
|||||||| || ||||||||| ||| ||| | | | ||||||||| | | |||
Sbjct 722017 ACCTGGCGCACTACAACAAGCGATCCACCATCACCTCTTGGGAGATCCAGTCGGTTGTGT 721958
Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
| ||||| ||| ||| || ||||||| |||||| || || ||||||||||
Sbjct 721957 GGCTGATGCTGCCCGGGGAGCTGGCCAAGCACGCTGTGTCTGAGGGCACCA 721907
Score = 104 bits (114), Expect = 3e-16
Identities = 166/235 (71%), Gaps = 10/235 (4%)
Strand=Plus/Minus
Query 724910 TATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTC 724969
||| ||||||||||| |||||||| || || || || |||| ||| ||| |
Sbjct 1489709 TATTTACAAGGTGCTAAAGCAGGTTCATCCAGACAC-----GGGCATC-TCCTCAAAGGC 1489656
Query 724970 CATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGC--ATCGGCACCGAGGCC 725027
||| |||||||| || |||||| ||||| | || || ||| | |||||
Sbjct 1489655 TATGAGCATCATGAATTCCTTTGTCTCTGACATATTTGAACGTGTATCTGGT--GAGGCG 1489598
Query 725028 GGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCC 725087
|||||||||| || |||||||||| || ||| | || ||||||||||| ||
Sbjct 1489597 TCGCGCCTGGCGCACTACAACAAGCGCTCAACCATCTCATCACGGGAGATCCAGACGGCG 1489538
Query 725088 GTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| | ||| | ||| |||||| ||||||| ||| ||||| |||||||||||||
Sbjct 1489537 GTTAGGCTGCTGCTGCCCGGCGAGCTGGCCAAGCATGCCGTGTCCGAGGGCACCA 1489483
>seq23
Length=20549582
Score = 170 bits (188), Expect = 3e-36
Identities = 176/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 19816766 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 19816713
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 19816712 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 19816653
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| |||| ||||||||||| ||||||||
Sbjct 19816652 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCGCGGGAGATCCAGACGGCCGTGCGG 19816593
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||| || || ||||||||||
Sbjct 19816592 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCGGTGTCGGAGGGCACCA 19816544
Score = 167 bits (184), Expect = 3e-35
Identities = 175/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 19511083 TACAAGGTGCTAAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 19511030
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| |||||| |||
Sbjct 19511029 GGCATCATGAACTCTTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 19510970
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| |||| ||||||||||| ||||||||
Sbjct 19510969 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCGCGGGAGATCCAGACGGCCGTGCGG 19510910
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||| || || ||||||||||
Sbjct 19510909 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCGGTGTCGGAGGGCACCA 19510861
Score = 167 bits (184), Expect = 3e-35
Identities = 175/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 19774782 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 19774835
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| |||||| |||
Sbjct 19774836 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 19774895
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| |||| ||||||||||| ||||||||
Sbjct 19774896 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCGCGGGAGATCCAGACGGCCGTGCGG 19774955
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||| || || ||||| ||||
Sbjct 19774956 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCGGTGTCGGAGGGTACCA 19775004
Score = 147 bits (162), Expect = 3e-29
Identities = 140/179 (78%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 724964 CAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGA 725023
|||| ||||| |||||||||||||| ||||||||||| |||| ||||||| |||
Sbjct 19495867 CAAGGCCATGGGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGA 19495808
Query 725024 GGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGAC 725083
||| |||||||||| || |||||||||| || ||| |||| |||||||||||
Sbjct 19495807 GGCGTCGCGCCTGGCGCACTACAACAAGCGCTCGACCATCACGTCGCGGGAGATCCAGAC 19495748
Query 725084 CGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|||||||| ||| | ||| ||| || ||||||| |||||| || || ||||||||||
Sbjct 19495747 GGCCGTGCGGCTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCGGTGTCGGAGGGCACCA 19495689
Score = 147 bits (162), Expect = 3e-29
Identities = 140/179 (78%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 724964 CAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGA 725023
|||| ||||| |||||||||||||| ||||||||||| |||| ||||||| |||
Sbjct 19834652 CAAGGCCATGGGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGA 19834711
Query 725024 GGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGAC 725083
||| |||||||||| || |||||||||| || ||| |||| |||||||||||
Sbjct 19834712 GGCGTCGCGCCTGGCGCACTACAACAAGCGCTCGACCATCACGTCGCGGGAGATCCAGAC 19834771
Query 725084 CGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|||||||| ||| | ||| ||| || ||||||| |||||| || || ||||||||||
Sbjct 19834772 GGCCGTGCGGCTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCGGTGTCGGAGGGCACCA 19834830
Score = 114 bits (126), Expect = 2e-19
Identities = 114/148 (77%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 724995 AACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGC 725054
|||||||| |||| ||||||| |||||| |||||||||| || ||||||||||
Sbjct 19767705 AACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGCCTGGCGCACTACAACAAGCGC 19767646
Query 725055 AACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTG 725114
|| ||| |||| ||||||||||| |||||||| ||| | ||| ||| || |||
Sbjct 19767645 TCGACCATCACGTCGCGGGAGATCCAGACGGCCGTGCGGCTGCTGCTGCCCGGGGAGCTG 19767586
Query 725115 GCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|||| |||||| || || ||||||||||
Sbjct 19767585 GCCAAGCACGCGGTGTCGGAGGGCACCA 19767558
Score = 107 bits (118), Expect = 3e-17
Identities = 110/144 (76%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 724999 ACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACA 725058
|||| |||| ||||||| |||||| |||||||||| || |||||||||| |
Sbjct 19793836 ACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGCCTGGCGCACTACAACAAGCGCTCGA 19793895
Query 725059 CGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCA 725118
| ||| |||| ||||||||||| |||||||| ||| | ||| ||| || |||||||
Sbjct 19793896 CCATCACGTCGCGGGAGATCCAGACGGCCGTGCGGCTGCTGCTGCCCGGGGAGCTGGCCA 19793955
Query 725119 GGCACGCCGTCTCCGAGGGCACCA 725142
|||||| || || ||||||||||
Sbjct 19793956 AGCACGCGGTGTCGGAGGGCACCA 19793979
>seq310
Length=1398298
Score = 161 bits (178), Expect = 1e-33
Identities = 175/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||| ||| || ||| |||| || |||| |||||
Sbjct 1308290 TACAAGGTGCTGAAGCAGGTGCATCCCGACAC---TGG--CATC-TCGTCCAAGGCCATG 1308237
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| | |||||| |||
Sbjct 1308236 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCTAGCGAGGCGTCGCGC 1308177
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
|||||| || |||||||||| || ||| | |||||| | ||||| |||||||||
Sbjct 1308176 TTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGCGAGGTGCAGACTGCCGTGCGC 1308117
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| |||||||| ||||
Sbjct 1308116 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGTACCA 1308068
>seq45
Length=14289500
Score = 131 bits (144), Expect = 2e-24
Identities = 169/232 (73%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|| |||||| |||| |||||||||||||| || || |||| || |||| ||
Sbjct 12766677 ATGTACAAGATGCTGAAGCAGGTGCACCCTGACAC-----GGGCATC-TCGTCCAAGGCC 12766624
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||| |||||||||| ||| || |||||||| |||| |||||| ||||||
Sbjct 12766623 ATGGGTATCATGAACTTGTTCGTGAACGACATCTTCGAGTGCATCGCAGGCGAGGCATCG 12766564
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|||||||||| || || |||| || ||| ||| ||| ||||||||||| ||| ||
Sbjct 12766563 CGCCTGGCGCACTACAGCAAGTGCTCCACCATCACGTCGCAGGAGATCCAGACGGCCATG 12766504
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
| ||| | ||| ||| || ||||||| |||||| || || ||||||||||
Sbjct 12766503 CAGCTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCAGTGTCAGAGGGCACCA 12766452
>seq187
Length=5094135
Score = 116 bits (128), Expect = 5e-20
Identities = 271/400 (68%), Gaps = 13/400 (3%)
Strand=Plus/Minus
Query 1455906 TTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGA 1455965
||||||| | |||||||||||||| || ||||| |||| | || |||| ||||
Sbjct 5557 TTTTTTC-CTGCCAGCGATGGCATAGTCAGTGAGAATCTGGTGGAGCGATTTAACCAAGA 5499
Query 1455966 GGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCA 1456025
|| ||| | |||| || || | || ||||| |||||||| ||||| |||||| | ||
Sbjct 5498 AGTTCAAATTACAGAAGCCCGGTGTTTCTACGGCTTCCAGATTGCCATGGAAAACCTGCA 5439
Query 1456026 CTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCA 1456085
|| |||| ||| | ||||| || ||||| ||| | | || | || | |||
Sbjct 5438 TTCGGAAATGTACACACTCCTTATGGACACTTACATTAGAGATTCCCAAGAAAGGGAGTT 5379
Query 1456086 CCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAA 1456145
||||| |||| || || ||| | | |||| ||| ||||| ||||||||| ||
Sbjct 5378 TCTCTTCAATGCCACTGAGACCGTGGCCTGTGTGAAGAAGAAGGCAGACTGGGCGTTGCG 5319
Query 1456146 GTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGC- 1456201
||||| |||| |||| | ||| | || || | || | ||||| | |
Sbjct 5318 CTGGATAGGGGACAAAGAGG----CCACA-TATGGAGAACACACGGTGGCCTTTGTCACT 5264
Query 1456202 GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CCATCTTTTGGCTCAAGAAGCGCGG 1456260
|| || || || || || || || ||| |||| ||||| ||||||||||| || ||
Sbjct 5263 GTGGAAGGAATTTTCTTTTCTGGTTCTTT-TGCGTTGATCTTCTGGCTCAAGAAACGGGG 5205
Query 1456261 CCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAG 1456300
||||||||| || | || |||| ||||||| | || ||
Sbjct 5204 CCTCATGCCTGG-CCTCACCTTTTCCAACGAACTCATTAG 5166
>seq145
Length=7964734
Score = 100 bits (110), Expect = 4e-15
Identities = 249/374 (67%), Gaps = 3/374 (1%)
Strand=Plus/Minus
Query 332874 AGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTGCAGG 332933
|||||| | ||| || || ||| | || ||| |||| | | ||| | ||||||||
Sbjct 10101 AGCGCAACACGGCGCAGTGGGACTGGATGGGCTCTATGATCTTGTTCGAGGCGTTGCAGG 10042
Query 332934 CCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGGG 332993
|||| | || || || || |||| | | ||||||||| ||| |||||||| || |
Sbjct 10041 CCAGTGTGAAGCGGGTGGTCTTGGAGTAGATCTCCATGGTCTTCCGTAGGGCCTGCTGCG 9982
Query 332994 CCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGCGGCA 333053
| | ||| | || || ||||||||| ||||||||||||| ||| || || || |
Sbjct 9981 CGCCATCCGTCATGCTGTTGGCCTCGTCAAGGATGATGATCTCGTGCCGGCCTCTGGGAA 9922
Query 333054 GATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCACGACGTCCACGCCGCGCT 333113
| || | | | ||| | ||| || | || ||||| || || | ||| | |
Sbjct 9921 GCGTCACTTTCTGCTGGGCAAAATCTTT-ATTTTATTCCGCACAACATCGATGCCCCTGT 9863
Query 333114 CGTCCGACGCGTTGAGTTCGAGCACGGCCT-CGTCGGCGGCCGCACCCAAGAGGACGCGC 333172
| | || || ||||| || || || | | | || || || | |||| |||| | ||
Sbjct 9862 CATTGGATGCATTGAGCTCCAGAACTGTATCCTTCAGC-GCGGGGCCCAGGAGGGCTCGT 9804
Query 333173 GCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGGCGGACCCGCCAGCAAGAGGTTG 333232
|||| |||| ||||| ||||| ||||| || || || || || || | | || |||
Sbjct 9803 GCCAAGCACAGTATGCTGGTGGTTTTGCCAGTTCCAGGGGGCCCAGCAATGATGATATTG 9744
Query 333233 GGCATGTTGCCGTC 333246
||||||| || ||
Sbjct 9743 TGCATGTTCCCTTC 9730
>seq142
Length=8229870
Score = 86.0 bits (94), Expect = 9e-11
Identities = 138/195 (71%), Gaps = 10/195 (5%)
Strand=Plus/Plus
Query 837219 GTCGACTCTTTTTGGATGCCGTAAAAAGAGAGCGAGAGTCGGTCGTCTAAAGGTCGGCCG 837278
|| ||||||||||||||| ||| |||||||| | | || || | || ||||
Sbjct 4403848 GTGGACTCTTTTTGGATGTTGTAGTCAGAGAGCGTTCGACCATCCTCCAGTTGTTTGCCG 4403907
Query 837279 GCAAATGTCATCTTCTGTTGGTCCGCGGGGATACCCTCCTTGTCATAGA--CAAGCCACT 837336
|||||| ||| ||| ||||| | |||||| ||||||||||| | || | || |
Sbjct 4403908 GCAAATATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATTCTGGC--TT 4403965
Query 837337 TGA---TCTCGAGTATGGTGTCGCCGTGCCGCGCCTCGATCGTGATCGTCTTGCCCGTCA 837393
||| ||||| |||||||| | | || |||||| ||||| ||||||||| |||
Sbjct 4403966 TGACATTCTCG---ATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTGCCCATCA 4404022
Query 837394 GCGTCTTTAAAAAGA 837408
| ||||| | |||||
Sbjct 4404023 GGGTCTTCACAAAGA 4404037
>seq98
Length=10222197
Score = 86.0 bits (94), Expect = 9e-11
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 1818122 GGGCACGCCCACCTCGTCAATGTCAATCTCGGGGTCGGGGCTGATGACGGCGCGCGCGGT 1818181
||||||||| |||| ||||||| | | |||||||||| ||||||| | || || |
Sbjct 5099424 GGGCACGCCAACCTGGTCAATGGACAGGTTGGGGTCGGGGGTGATGACAGTACGGGCTGA 5099365
Query 1818182 AAAGTTGACGCGCTTGCCCATGCAATTGCCGCGGATCCTGCCCTCCTTGCCCTTGAACCG 1818241
||||| || ||||||||||| || || || | || ||| ||||||||||| | |||
Sbjct 5099364 AAAGTCCACTCGCTTGCCCATCAGGTTCCCTCGCACCCGGCCTTCCTTGCCCTTCAGCCG 5099305
Query 1818242 CT 1818243
||
Sbjct 5099304 CT 5099303
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177123016135870
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |