Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octodon_20degus_20[refseq_20GCF_5F000260255.1_202012-05-01] 7,135 sequences; 2,995,889,303 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq61 113 5e-20 >seq61 Length=12690915 Score = 113 bits (124), Expect = 5e-20 Identities = 119/157 (76%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 32674 TGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCATAATGA 32733 |||||| || || | |||||||| | || ||| | ||||| | ||||| || ||| Sbjct 8076591 TGTGGTGGTACTTCGTGTCTAAAGGAGTGGAGTATTTGGATACAGTGTTCTTTATCCTGA 8076532 Query 32734 GAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGTTTACTT 32793 | |||||| ||||||||| ||| |||||||| || ||||| | ||||||||| ||| Sbjct 8076531 GGAAGAAAAACAACCAAGTTTCCTTCTTGCACGTGTATCACCACTGTACCATGTTCACTC 8076472 Query 32794 TAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACA 32830 | | ||||| || ||||| ||| ||||||||||||| Sbjct 8076471 TGTGGTGGATTGGAATTAAGTGGGTTGCAGGAGGACA 8076435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603127003812400