Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octodon_20degus_20[refseq_20GCF_5F000260255.1_202012-05-01] 7,135 sequences; 2,995,889,303 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq74 381 5e-101 seq107 241 1e-58 seq109 219 3e-52 seq82 205 8e-48 seq75 143 2e-29 seq11 123 2e-23 seq10 114 1e-20 seq26 113 4e-20 seq125 107 2e-18 seq94 105 5e-18 seq20 104 2e-17 seq18 104 2e-17 seq126 102 7e-17 seq129 96.9 3e-15 seq111 96.9 3e-15 seq272 95.1 1e-14 seq3487 93.3 3e-14 seq7 93.3 3e-14 seq12 84.2 2e-11 >seq74 Length=13126430 Score = 381 bits (422), Expect = 5e-101 Identities = 526/731 (72%), Gaps = 6/731 (1%) Strand=Plus/Plus Query 29732 ACTGCCATCCTCATCCTTATGGCGGGATGAGGGTCGTAACCCTCCAGGGAGAAATCCTCT 29791 || |||||| | || | |||| ||| || || | ||| || ||||| ||| || || Sbjct 9227782 ACAGCCATCTCCTTCTTAATGGAGGGGTGGGGATTGTACCCTTCCAGCTGGAAGTCTTCA 9227841 Query 29792 GCCTTAAAGTCGTCCAGGCTCTCCACCCTCCTGTTTATCCTCAG-TGTGGGAAAGGGTCT 29850 || | ||||| || | |||| || | | || | || | ||||||||| || Sbjct 9227842 GCTGTGAAGTCATCGATTGTCTCAACTTTTCGAAGGATTTTGAGCTTTGGGAAAGGC-CT 9227900 Query 29851 GGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTC 29910 || || | | ||||||||||||||||| | | || || |||||||| || ||||| Sbjct 9227901 TGGTTCTCGTTGAAGCTGAGTCTTCAGCGGCTTGATGTGATTCAGGTAGATATGTGCGTC 9227960 Query 29911 TCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 29970 ||||| |||| || || ||||| || | || || |||||||| || | |||||| || Sbjct 9227961 TCCCAAAGTGTGCACGAAGTCTCCTGGCTTCAGGCCTGTGACGTGCGCGACCATGTAGGT 9228020 Query 29971 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTG 30030 ||| || | | ||||||||||||| |||||||| || || ||||||||||| |||| ||| Sbjct 9228021 GAGCAGCGCGCAGCTGGCGATGTTGAAGGGTACGCCCAGGCCCATGTCCCCTGACCGCTG 9228080 Query 30031 GTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGCGTGGCACGG 30090 ||| ||||| || || ||||| |||| |||||| ||||| |||| || |||||| || Sbjct 9228081 GTACAGCTGGCAGGACAGCTCCCCGTTCACCACGTAGAACTGGCACAGGGTGTGGCAGGG 9228140 Query 30091 AGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTC 30150 ||| || ||||| || | ||||| ||||||||||| |||| |||||| | ||||| Sbjct 9228141 AGGCAGCGCCATCAGAGGGAGATCTTTTGGGTTCCAGGCACACATGATGATCCTTCTGTC 9228200 Query 30151 TTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGA 30210 | |||| | | ||||| || | |||| |||||||| || || || ||||| Sbjct 9228201 GTTAGGGTCGGTTTTGATGGTGTTGATCACGTTCTGCAGCTGGTCAACTCCTTGACCCGA 9228260 Query 30211 GTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACAC 30270 ||| |||| | | || |||| ||||| |||||||||||||||||||| || || || Sbjct 9228261 GTAATCTGAGTCCGTATCTTTGTAGTCTGCCCCGAAATGCCTCCACTGGAAGCCATAGAC 9228320 Query 30271 CGGTCCCAGGTCTCCCTCTTCCCTGTGCTCG--AAGCCCCTCTTGTCCAAAAAGTCTCTG 30328 || |||||||| || |||| | ||| | || ||| |||||| || || | | Sbjct 9228321 GGGGCCCAGGTCCCCTTCTTTGC--GGCTAGAAAACCCCAGGCTGTCCAGGAAATCCCGG 9228378 Query 30329 GAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGAC 30388 || || ||||| ||||||||||| || || || || ||||| |||| ||||| || Sbjct 9228379 GACCCATTGGCATCCCAGATCTTCACTCCTTTGGATGACAGCTCCTTGGCATTTGTAGAT 9228438 Query 30389 CCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTG 30448 || ||| |||||||||||||| |||| | ||||||| || || | |||||| || Sbjct 9228439 CCCTTGATAAACCACAGCAGCTCTTCCAGAATACCCTTCCAGAATACACGCTTGGTGGTC 9228498 Query 30449 AGGAGGGGAAA 30459 || |||||||| Sbjct 9228499 AGCAGGGGAAA 9228509 >seq107 Length=10030941 Score = 241 bits (266), Expect = 1e-58 Identities = 389/558 (70%), Gaps = 21/558 (4%) Strand=Plus/Minus Query 29864 AGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTGG 29923 |||||||| |||||| | || | || || |||||||| || || ||||||| | || Sbjct 3003366 AGCTGAGTTTTCAGCAGCTCAATGTGATTCAGGTAGATATGTGCATCTCCCAAAGTATGC 3003307 Query 29924 ACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAG 29983 ||||| |||| |||| || || | || ||| ||||| || | |||| Sbjct 3003306 ACAAAGCCTCC--------------TGACATGCGCGACCAAGTAGGTGAGCAGCGCGTAG 3003261 Query 29984 CTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTG--GTAGAGCTGAC 30041 ||| ||||||| ||||| || || || ||||| ||||| |||| ||| ||| |||| | Sbjct 3003260 CTGACGATGTTGAAGGGCACTCCCAGGCCCATATCCCCTGACCACTGTGGTACGGCTGGC 3003201 Query 30042 ACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCA 30101 | || ||||| || | ||||||||||| |||| || |||||| ||||| ||||||| Sbjct 3003200 AGGACAGCTCCCCATTCACCACGTAAAACTAGCACAGGGTGTGGCAGGGAGGCAGAGCCA 3003141 Query 30102 TGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGT 30161 | || | ||||| |||| ||||| |||| |||||| | ||||| || |||||| Sbjct 3003140 TCAGAGGGAGATCTTTCAGGTTTCAGGCACACATGATGATCCTTCTGTCATCAGGGTTGG 3003081 Query 30162 TCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCC 30221 | ||||| || | |||| |||||||| || | || || ||||| |||| Sbjct 3003080 TTTTGATGGTGTTGATCACGTTCTGCAGCTGGTCATCTCCTTGACCTGAGTAATCTGAGT 3003021 Query 30222 TCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGT 30281 ||| | ||| || || | |||||||||||||||||| || | || || |||||| Sbjct 3003020 CCATACCTTCGTAGTCAGCCCTGAAATGCCTCCACTGGAAGCCACAGACGGGGCCCAGG- 3002962 Query 30282 CTCCCTCTTCCCTGT-GCTCG--AAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGG 30338 |||| ||||| || ||| | || ||| | |||| || || | ||| || |||| Sbjct 3002961 -TCCCCCTTCCTGGTGGCTAGAAAACCCCAGGCTATCCAGGAAATCCCGGGACCCATTGG 3002903 Query 30339 CGTCCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGA 30398 | ||||||||||| || || || || ||||| |||| |||| | || ||| | Sbjct 3002902 CATCCCAGATCTTCACTCCTTTGGATGACAGCTCCTTGGCATTTGCATATCCCTTGATAA 3002843 Query 30399 ACCACAGCAGCTCCTCCA 30416 |||||||||| ||||||| Sbjct 3002842 ACCACAGCAGTTCCTCCA 3002825 >seq109 Length=10228628 Score = 219 bits (242), Expect = 3e-52 Identities = 428/625 (68%), Gaps = 17/625 (3%) Strand=Plus/Plus Query 29838 TGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGT 29897 ||||||||| || || || | || |||||||| |||||| | || || || |||| Sbjct 4836432 TGGGAAAGGC-CTTGGTTCTCGCTGAAGCTGAGTTTTCAGCTGCTCAGTGTGATTTAGGT 4836490 Query 29898 AGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGG-TTCTAGCCCGGTGACGTGA 29956 ||| | || |||| || | || ||||| || || || ||| |||| | |||||| Sbjct 4836491 AGATAGGTGCATCTCTCAAAGTATGCACAAAGTCACCTGGCTTCAGGCCCCGCGACGTGC 4836550 Query 29957 GCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATG 30016 || | || ||| ||||| | |||||||| || | | |||| || || || |||||| Sbjct 4836551 GCGA-CAAGTAGGTGAGCCCCGCGTAGCTGGTGAGGCTGCAGGGCACGCCCAGGCCCATG 4836609 Query 30017 TCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACAC 30076 ||||| |||| ||| || ||||| || || ||||| | | |||| | | ||| Sbjct 4836610 TCCCCTGACCGCTGCTACAGCTGGCAGGACAGCTCCCTAT---TCACC-AGAGCTG---- 4836661 Query 30077 ATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACG 30136 || |||||| ||||| || |||| || | ||||| |||||||||| | ||| | Sbjct 4836662 --GGTGTGGCAGGGAGGCAGCGCCACCAGAGGGAGATCTTTCGGGTTCCAGGAGTACATG 4836719 Query 30137 ATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCC 30196 ||||| | || || || |||||| | ||| || | ||| |||||||| | Sbjct 4836720 ATGATCCTTCTATCATCAGGGTTGGTTTTGACAGCGTTGATCATGTTCTGCAGCTGGCCT 4836779 Query 30197 ACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCAC 30256 || || |||| | | |||| |||||| |||| || || |||||||||||||| Sbjct 4836780 ACTCCTTGACCCGGGCAATCTGAGTCCATGTCTTTGTAGTCAGCCCCGAAATGCCTCCAG 4836839 Query 30257 TGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCT--TGT 30314 |||| || || || || ||||||| ||||| | ||| || ||| ||| ||| Sbjct 4836840 GGGAAGCCATAGACGGGGCCCAGGTGCCCCTCCTGGCTG--CTAGAACACCCCAGGCTGT 4836897 Query 30315 CCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGAGAGCTCTT 30374 ||| || | | ||| ||| |||| ||||||||||| || || || || ||||||| Sbjct 4836898 CCAGGAAACCCCAGGACCCGCTGGCATCCCAGATCTTCACTCCTTTGGATGACAGCTCTT 4836957 Query 30375 TGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGA 30434 || || || || | ||| |||||||| |||| |||| ||| ||||||| || | Sbjct 4836958 TGACATTAGTAGATACCTTGATAAACCACAGTGGCTCGTCCAGGACACCCTTCCAGAACA 4837017 Query 30435 CCCTCTTGGTCGTGAGGAGGGGAAA 30459 | | |||||| || || |||||||| Sbjct 4837018 CACACTTGGTTGTCAGCAGGGGAAA 4837042 >seq82 Length=12555031 Score = 205 bits (226), Expect = 8e-48 Identities = 407/598 (68%), Gaps = 16/598 (3%) Strand=Plus/Plus Query 29866 CTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTGGAC 29925 ||| || |||||| | || | || || || ||||| || |||||| ||| | || || Sbjct 10556193 CTGGGTTTTCAGCAGCTCAATGTGATTCAAGTAGATATGTGCGTCTGCCAATGTATGCAC 10556252 Query 29926 AAACTCTCCCGG-TTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGC 29984 || || || | ||| |||||| || ||| | | |||||| ||| || ||||| Sbjct 10556253 CAAGTCACCTGCCTTCAAGCCCGC-GATGTGCGTGACCATGTAGTGGAGCAGCCCGTAGC 10556311 Query 29985 TGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACG 30044 |||||||||| ||||| || || || |||| || | | |||| |||||| ||||| | | Sbjct 10556312 TGGCGATGTTGAAGGGCACACCCAGGCCCACGTTCTCTGACCGCTGGTATAGCTGGCTC- 10556370 Query 30045 AGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGA 30104 ||| || | |||||| ||||| |||| ||||||||| ||||| || ||||| | Sbjct 10556371 ------CTCGTTCAC-CACGTAGAACTGGCACAGGGCGTGGCAGGGAGGCAGGGCCATCA 10556423 Query 30105 GGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCC 30164 | | ||| | ||||||||||| |||| |||||| | |||| || ||||| Sbjct 10556424 GAGGGAGATCTGTTGGGTTCCAGGCACACATGATGATACTTCTGTTGTCAGGGTTAACTT 10556483 Query 30165 TGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCA 30224 ||| | || | || || |||||||| | || || || |||| |||| || Sbjct 10556484 TGACGGTGTTGATCGCATTCTGCAGCTGGTTAACTCCTTGACCTAAGTAATCTGAGTCCA 10556543 Query 30225 TGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTC 30284 | || |||| || || | |||| || ||||||||| | || || || ||||||| Sbjct 10556544 TATCTTTGTAGTCAGCACAAAAATACCACCACTGGAAGTCATAGACAGGGCCCAGGT--- 10556600 Query 30285 CCTCTTCCCTGTGCT---CGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 30341 || || || ||| | || ||| ||| || || ||| || ||||| | Sbjct 10556601 CCCCTGCCTGGTGGTTAGAAAACCCCAGGCAGTCTGGGAAATCCTGGGACCCATTGGCAT 10556660 Query 30342 CCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 30401 |||||||||| || ||||| | |||||||||| || | || || ||| |||| Sbjct 10556661 CCCAGATCTTCACTCCCTTGGATGGCAGCTCTTTGGCACTTATAGATCCCTTGATAAACC 10556720 Query 30402 ACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30459 ||||||||||||||| || ||||||| || || | ||||| || || |||||||| Sbjct 10556721 ACAGCAGCTCCTCCAGGATACCCTTCCAGAACACACGTTTGGTTGTCAGCAGGGGAAA 10556778 Score = 125 bits (138), Expect = 6e-24 Identities = 185/260 (71%), Gaps = 8/260 (3%) Strand=Plus/Minus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438 ||||||||| || || || || || || || ||||| |||| || || |||||| | Sbjct 3134537 ATGAGCTCCTTGGGGAGGTTCCTTGAGTTCTCTACTGAGTACTATATTAATTCTGTCTTT 3134478 Query 110439 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 110498 || ||| | |||||| || || ||||||||||| ||||| |||||||||| ||||| || Sbjct 3134477 CAAAGGGCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCTACCCATTACCACCAGATT 3134418 Query 110499 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 110557 ||| || ||| ||||| | || | |||| | ||| | |||| || || || || | Sbjct 3134417 CTGTTTACCTTCCACTGAGGTGGTTGTGGTC-ATTCTCTGGAAGTAGTTGAATTCATTCC 3134359 Query 110558 AAAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATGTCTGGACACG 110617 || || |||| |||| |||||||| | ||||| ||||||| || || Sbjct 3134358 TGAG------CGGGGGCCAGGGCAAGTCTCCGTTCCTGCCGATACCCATGTTCTGAGACA 3134305 Query 110618 CGGCCACGATACCGTTCAGA 110637 |||| ||||| | ||||||| Sbjct 3134304 CGGCGACGATGCAGTTCAGA 3134285 >seq75 Length=11870250 Score = 143 bits (158), Expect = 2e-29 Identities = 130/164 (79%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 29942 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 30001 || || |||||||| || | |||||| ||||| || | |||||||||||||| ||||| Sbjct 4085023 AGGCCCGTGACGTGCGCGACCATGTAGGTGAGCAGCGCATAGCTGGCGATGTTGAAGGGC 4084964 Query 30002 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 30061 || || || ||||||||||| |||| |||||| ||||| || || ||||| || | | Sbjct 4084963 ACGCCCAGGCCCATGTCCCCTGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATTCACC 4084904 Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAG 30105 ||||| ||||| |||| ||||||||| ||||| || ||||| || Sbjct 4084903 ACGTAGAACTGGCACAGGGCGTGGCAGGGAGGCAGCGCCATCAG 4084860 Score = 89.7 bits (98), Expect = 4e-13 Identities = 123/170 (72%), Gaps = 4/170 (2%) Strand=Plus/Minus Query 30223 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30282 ||| || |||| || || |||||||||||||||||||| || || || || |||||||| Sbjct 4081483 CATATCTTTGTAATCAGCCCCGAAATGCCTCCACTGGAAGCCATAGACGGGGCCCAGGTC 4081424 Query 30283 TCCCTCTTCCCTGTGCTCG--AAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCG 30340 || || | | ||| | || ||| |||||| || || | ||| || ||||| Sbjct 4081423 CCCTTCCTGGC--GGCTAGAAAACCCCAGGCTGTCCAGGAAATCCCGGGACCCATTGGCA 4081366 Query 30341 TCCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCC 30390 |||||||||||||| || || || ||||| |||| ||||| || || Sbjct 4081365 TCCCAGATCTTTACTCCTTTGGATGACAGCTCCTTGGCATTTGTAGATCC 4081316 >seq11 Length=28182674 Score = 123 bits (136), Expect = 2e-23 Identities = 187/261 (72%), Gaps = 10/261 (4%) Strand=Plus/Minus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438 ||||||||| || || || || || || || ||||| |||| || || |||||| | Sbjct 11213749 ATGAGCTCCTTGGGGAGGTTCCTTGAGTTCTCTACTGAGTACTATATTAATTCTGTCTTT 11213690 Query 110439 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 110498 || ||| | |||||| || || ||||||||||||||||| |||||||||| ||||| || Sbjct 11213689 CAAAGGGCGATTCTTCTCAGGAATGGAGAACCAAGTCTTCCTACCCATTACCACCAGATT 11213630 Query 110499 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 110557 ||| || ||| ||||| | || | |||| | ||| | |||| || || || || | Sbjct 11213629 CTGTTTACCTTCCACTGAGGTGGTTGTGGTC-ATTCTCTGGAAGTAGTTGAATTCATTCC 11213571 Query 110558 AAAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACAC 110616 || || |||| |||| || ||||| | ||||| |||||| ||||| || Sbjct 11213570 TGAG------CGGGGGCCAGGGCAAGTCCCCGTTCCTGCCGATACCCATGTTCTGG-GAC 11213518 Query 110617 GCGGCCACGATACCGTTCAGA 110637 |||| ||||| | ||||||| Sbjct 11213517 ACGGCGACGATGCAGTTCAGA 11213497 >seq10 Length=29551940 Score = 114 bits (126), Expect = 1e-20 Identities = 178/248 (72%), Gaps = 10/248 (4%) Strand=Plus/Minus Query 110392 GGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTC 110451 || || || || || || || ||||| |||| || || |||||| ||| ||| | |||| Sbjct 24703272 GGAGGTTCCTTGAGTTCTCTACTGAGTACTATATTAATTCTGTCTTTCAAAGGGCGATTC 24703213 Query 110452 TTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCTCTG 110511 || || || ||||||||||| |||||||||| ||||| ||||| ||||| || ||| Sbjct 24703212 TTCTCAGGAATGGAGAACCAGGTCTTTCTACTCATTACCACCAGATTCTGTTTACCTTCC 24703153 Query 110512 ACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGCAAAGTCTCGCAGG 110570 ||||| | || | |||| | ||| | |||| || || || || | | ||||| Sbjct 24703152 ACTGAGGTGGTTGTGGTC-ATTCTCTGGAAGTAGTTGAATTCATTCCTGA-----GCAGG 24703099 Query 110571 ATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACACGCGGCCACGATAC 110629 |||| |||| || ||||| | ||||| |||||| ||||| || |||| || || | Sbjct 24703098 -GGCCAGGGCAAGTCCCCGTTCCTGCCGATACCCATGTTCTGG-GACACGGCGACAATGC 24703041 Query 110630 CGTTCAGA 110637 ||||||| Sbjct 24703040 AGTTCAGA 24703033 >seq26 Length=19343008 Score = 113 bits (124), Expect = 4e-20 Identities = 184/260 (71%), Gaps = 10/260 (4%) Strand=Plus/Plus Query 110380 TGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTC 110439 |||||||| || || | || ||||| || ||||| |||| || | |||||| || Sbjct 10932912 TGAGCTCCTTGGGGAGGTCCCTTGAGCTCTCTACTGAGTACTATATTAAGTCTGTCTTTC 10932971 Query 110440 AGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTC 110499 | ||||| |||||| || || ||||||||||| ||||| |||||||||| ||||| ||| Sbjct 10932972 AAAGGTCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCTACCCATTACCACCAGTTTC 10933031 Query 110500 TGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGCA 110558 || || ||| ||||| | || | |||| | ||| | || | || || || || | Sbjct 10933032 TGTTTACCTTCCACTGAGGTGGTTGTGGTC-ATTCTCTGGAAATAGTTGAATTCATTCCT 10933090 Query 110559 AAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACACG 110617 ||| ||| ||| |||| || ||||| | ||||| |||||| ||||| || Sbjct 10933091 GAGT------GGAGACCAGGGCAAGTCCCCGTTCCTGCCGATACCCATGTTCTGG-GACA 10933143 Query 110618 CGGCCACGATACCGTTCAGA 110637 ||| ||||| | ||||||| Sbjct 10933144 TGGCGACGATGCAGTTCAGA 10933163 >seq125 Length=9353109 Score = 107 bits (118), Expect = 2e-18 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438 ||||||||| || || || || || || || ||||| |||| || || |||||| | Sbjct 7288467 ATGAGCTCCTTGGGGAGGTTCCTTGAGTTCTCTACTGAGTACTATATTAATTCTGTCTTT 7288526 Query 110439 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 110498 || ||| | |||||| || || ||||||||||||||||| |||||||||| ||||| || Sbjct 7288527 CAAAGGGCGATTCTTCTCAGGAATGGAGAACCAAGTCTTCCTACCCATTACCACCAGATT 7288586 Query 110499 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCA 110530 ||| || ||| ||||| | || | ||||| Sbjct 7288587 CTGTTTACCTTCCACTGAGGTGGTTGTGGTCA 7288618 >seq94 Length=11208488 Score = 105 bits (116), Expect = 5e-18 Identities = 114/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 110380 TGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTC 110439 |||||||| || || || || || | || ||||| |||| || || |||||| || Sbjct 6850001 TGAGCTCCTTGGGGAGGTTCCTTGAGTTTGCTACTGAGTACTATATTAATTCTGTCTTTC 6850060 Query 110440 AGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTC 110499 | ||||| |||||| || || ||||||||||| ||||| |||||||||| ||||| ||| Sbjct 6850061 AAAGGTCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCTACCCATTACCACCAGATTC 6850120 Query 110500 TGCTTGCCTCTGACTGAAGACGTAGCGGTCA 110530 ||||| ||| ||||| | || | ||||| Sbjct 6850121 TGCTTACCTTCCACTGAGGTGGTTGTGGTCA 6850151 >seq20 Length=23447253 Score = 104 bits (114), Expect = 2e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438 ||||||||| || || || || || || || ||||| |||| || || |||||| | Sbjct 11127143 ATGAGCTCCTTGGGGAGGTTCCTTGAGTTCTCTACTGAGTACTATATTAATTCTGTCTTT 11127202 Query 110439 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 110498 || ||| | |||||| || || ||||||||||| ||||| |||||||||| ||||| || Sbjct 11127203 CAAAGGGCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCTACCCATTACCACCAGATT 11127262 Query 110499 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCA 110530 ||| || ||| ||||| | || | ||||| Sbjct 11127263 CTGTTTACCTTCCACTGAGGTGGTTGTGGTCA 11127294 >seq18 Length=24717988 Score = 104 bits (114), Expect = 2e-17 Identities = 101/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 110401 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 110460 || ||||| || ||||| |||| || || |||||| ||| ||||| |||||| || || Sbjct 8895610 TTGAGCTCTCTACTGAGTACTATATTAATTCTGTCTTTCAAAGGTCAATTCTTCTCAGGA 8895669 Query 110461 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCTCTGACTGAAGAC 110520 ||||||||||| || || |||||||||| ||| | ||||| |||||| |||||| | Sbjct 8895670 ATGGAGAACCAGGTATTCCTACCCATTACCACAAGATTCTGTTTGCCTTCGACTGAGGTG 8895729 Query 110521 GTAGCGGTCA 110530 || | ||||| Sbjct 8895730 GTTGTGGTCA 8895739 >seq126 Length=8042663 Score = 102 bits (112), Expect = 7e-17 Identities = 180/259 (69%), Gaps = 9/259 (3%) Strand=Plus/Plus Query 110380 TGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTC 110439 |||||||| || || || | || || || ||||| ||| || || |||||| || Sbjct 3548731 TGAGCTCCTTGGGGAGGTTCCTCGAGTTCTCTACTGAGTCCTATATTAATTCTGTCTTTC 3548790 Query 110440 AGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTC 110499 | ||||| ||||| || || ||||||||||| ||||| ||||||||| ||||| ||| Sbjct 3548791 AAAGGTCACTTCTTCTCAGGAATGGAGAACCAGGTCTTCTTACCCATTACCACCAGATTC 3548850 Query 110500 TGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTCGAAAGTGTTTAAAATCTTTGCAA 110559 || || ||| ||||| | || | |||| || | |||| || || || || | Sbjct 3548851 TGTTTACCTTCCACTGAGGTGGTTGTGGTCTTCTCT-GGAAGTAGTTGAATTCATTCCTG 3548909 Query 110560 AGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACACGC 110618 ||| || |||| |||| || ||||| | | ||| |||||| ||||| || | Sbjct 3548910 AGT------GGGGGCCAGGGCAAGTCCCCGTTCCTGCTGATACCCATGTTCTGG-GACAC 3548962 Query 110619 GGCCACGATACCGTTCAGA 110637 ||| ||||| | ||||||| Sbjct 3548963 GGCGACGATGCAGTTCAGA 3548981 >seq129 Length=8405773 Score = 96.9 bits (106), Expect = 3e-15 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 110401 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 110460 || || || || ||||| |||| || || |||||| ||| ||| | |||||| || || Sbjct 1120959 TTGAGTTCTCTACTGAGTACTATATTAATTCTGTCTTTCAAAGGGCGATTCTTCTCAGGA 1121018 Query 110461 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 110508 ||||||||||||||||| |||||||||| ||||| ||||| || ||| Sbjct 1121019 ATGGAGAACCAAGTCTTCCTACCCATTACCACCAGATTCTGTTTACCT 1121066 >seq111 Length=10255479 Score = 96.9 bits (106), Expect = 3e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 110380 TGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTC 110439 |||||||| || || || || || || | ||||| |||| || || |||||| || Sbjct 169013 TGAGCTCCTTGGGGAGGTTCCTTGAGTTCTCCACTGAGTACTATATTAATTCTGTCTTTC 169072 Query 110440 AGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTC 110499 | ||| | |||||| || || ||||||||||| ||||| |||| ||||| ||||| ||| Sbjct 169073 AAAGGGCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCTACTCATTACCACCAGATTC 169132 Query 110500 TGCTTGCCTCTGACTGAAGACGTAGCGGTCA 110530 || || ||| ||||||| || | ||||| Sbjct 169133 TGTTTACCTTCCACTGAAGTGGTTGTGGTCA 169163 >seq272 Length=2648510 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 110380 TGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTC 110439 |||||||| || || || || || || || ||||| |||| || || |||||| || Sbjct 1736428 TGAGCTCCTTGGGGAGGTTCCTTGAGTTCTCTACTGAGTACTATATTAATTCTGTCTTTC 1736487 Query 110440 AGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTC 110499 | ||| | |||||| || || ||||||||||| ||||| |||||||||| ||||| ||| Sbjct 1736488 AAAGGGCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCTACCCATTACCACCAGATTC 1736547 Query 110500 TGCTT 110504 || || Sbjct 1736548 TGTTT 1736552 >seq3487 Length=3565 Score = 93.3 bits (102), Expect = 3e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 30314 TCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGAGAGCTCT 30373 |||| || || | ||| || |||| ||||||||||| || || || || | |||| Sbjct 1451 TCCAGGAAATCCCGGGACCCACTGGCTTCCCAGATCTTCACTCCTTTGGAGGACAACTCT 1392 Query 30374 TTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAG 30433 |||| ||||| || || ||| ||||||||||||||||||| || ||||||| | Sbjct 1391 TTGGCATTTGTAGATCCCTTGATAAACCACAGCAGCTCCTCCAGAACACCCTTCCAGAGC 1332 Query 30434 ACCCTCTTGGTCGTGAGGAGGGGAAA 30459 || | || |||||| || |||||||| Sbjct 1331 ACACGCTAGGTCGTCAGCAGGGGAAA 1306 >seq7 Length=34356042 Score = 93.3 bits (102), Expect = 3e-14 Identities = 165/236 (70%), Gaps = 10/236 (4%) Strand=Plus/Plus Query 110404 AGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATG 110463 || || || ||||| |||| || || |||||| ||| ||| | |||||| || | ||| Sbjct 4878621 AGTTCTCTACTGAGTACTATATTAATTCTGTCTTTCAAAGGGCGATTCTTCTCAAGAATG 4878680 Query 110464 GAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCTCTGACTGAAGACGTA 110523 |||||||| ||||| |||||||||| ||||| ||||| || ||| ||||| | || Sbjct 4878681 GAGAACCAGGTCTTCCTACCCATTACCACCAGATTCTGTTTACCTTCCACTGAGGTGGTT 4878740 Query 110524 GCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGCAAAGTCTCGCAGGATGCCACGGCAG 110582 | |||| | ||| | |||| || || || || | ||| || |||| | || Sbjct 4878741 GTGGTC-ATTCTCTGGAAGTAGTTGAATTCATTCCTGAGT------GGGGGCCAAGACAA 4878793 Query 110583 ATCTCCGTTGTTCCCGATGCCCATG-TCTGGACACGCGGCCACGATACCGTTCAGA 110637 || | ||| | ||||| |||||| ||||| || | || || || | ||||||| Sbjct 4878794 GTCCCTGTTCCTGCCGATACCCATGATCTGG-GACACAGCGACAATGCAGTTCAGA 4878848 >seq12 Length=28755977 Score = 84.2 bits (92), Expect = 2e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 110380 TGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTC 110439 |||||||| || || || || || || || ||||| | | || | |||||| || Sbjct 14868336 TGAGCTCCTTGGGGAGGTTCCTTGAGTTCTCTACTGAGTATTTTATTAAGTCTGTCTTTC 14868395 Query 110440 AGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTC 110499 | ||||| |||||| || || ||||||||||| | ||| || ||||||| ||||| ||| Sbjct 14868396 AAAGGTCAATTCTTCTCAGGAATGGAGAACCAGGGCTTCCTGCCCATTACCACCAGATTC 14868455 Query 110500 TGCTTGCCTCTGACTGAAGACGTAGCGGTCA 110530 || || ||| ||||| | || | ||||| Sbjct 14868456 TGTTTACCTTCCACTGAGGTGGTTGTGGTCA 14868486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406275068136420