Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octodon_20degus_20[refseq_20GCF_5F000260255.1_202012-05-01] 7,135 sequences; 2,995,889,303 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq7 165 7e-36 seq26 152 4e-32 seq94 143 2e-29 seq10 141 8e-29 seq20 140 3e-28 seq11 140 3e-28 seq272 134 1e-26 seq74 132 4e-26 seq125 131 1e-25 seq18 122 7e-23 seq12 113 4e-20 seq97 109 5e-19 >seq7 Length=34356042 Score = 165 bits (182), Expect = 7e-36 Identities = 204/275 (74%), Gaps = 7/275 (3%) Strand=Plus/Minus Query 1255 TTAAG-TGTTTTTTAGAAACGCCACAAGAAGTTGTCATTGTAACATGGCA--AAAAGTTA 1311 ||||| |||| | || | || | || |||| | ||||| || ||||| ||||| Sbjct 746285 TTAAGATGTTCTCTACAGACTTCCCAGGAAGCCTTAATTGTGACCTGGCAGAAAAAG--- 746229 Query 1312 AAGCATC-AAGCCCAGAAAACATGGCCACTTTTAGTAATGACCACGGGGTTGTTGTTCAG 1370 ||| || |||||| ||||||||| ||| | ||| | |||| |||||||| |||||| Sbjct 746228 AAGGTTCTAAGCCCGGAAAACATGATCACCTACAGTGAGAACCATGGGGTTGTGGTTCAG 746169 Query 1371 CCAGCATACAAAGATAAAATGAACATAACTGAGCTTGGACTACAAAACACAACTATAACC 1430 || || || | | | ||||||| |||||||| ||||| || || || | || ||| Sbjct 746168 CCCGCCTATGAGAACAGGGTGAACATTACTGAGCTGGGACTTCAGAAATCAGCCATCACC 746109 Query 1431 TTCTGGAACACAACATTGGATGATGAAGGGTGCTACAAGTGTTTATTTAACACTTTTGGA 1490 |||||||| ||||| |||| |||||||| || |||| |||| | || ||||| ||||| Sbjct 746108 TTCTGGAATGCAACACTGGAGGATGAAGGATGTTACATGTGTCTCTTCAACACCTTTGGC 746049 Query 1491 TCTGGGAAGATGTCAGGAATAGGGTGTCTAACCCT 1525 ||||||||||| ||||||| || || || ||||| Sbjct 746048 TCTGGGAAGATCTCAGGAACAGCCTGCCTTACCCT 746014 >seq26 Length=19343008 Score = 152 bits (168), Expect = 4e-32 Identities = 372/556 (67%), Gaps = 22/556 (4%) Strand=Plus/Minus Query 2138 CTCTAAACTGTATTGCAGCTGTCTCTGAAAATATGGGCATTGGAAACAAGGGAAAACTGC 2197 |||| ||||| || | || | || | || ||||| || || | || || | ||| Sbjct 10933164 CTCTGAACTGCATCGTCGCCATGTCCCAGAACATGGGTATCGGCAGGAACGGGGACTTGC 10933105 Query 2198 CATGGCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAAATGACATCTTCTTCCACTG 2257 | ||| |||| || | |||||||| || |||| || | |||||| | | || | | Sbjct 10933104 CCTGGTCTCCACTCAGGAATGAATTCAACTATTTCCAGAGAATGACCACAACCACCTCAG 10933045 Query 2258 ACTTA---AAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTA 2314 | |||||||| | || | ||||| || ||||| ||||| || |||| | | Sbjct 10933044 TGGAAGGTAAACAGAAACTGGTGGTAATGGGTAGGAAGACCTGGTTCTCCATTCC--TGA 10932987 Query 2315 AAAGCA--GGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCC 2372 ||| | | |||||||| ||||| | ||| | || ||||||||| | || || | || Sbjct 10932986 GAAGAATCGACCTTTGAAAGACAGACTTAATATAGTACTCAGTAGAGAGCTCAAGGGACC 10932927 Query 2373 ACCACGTGGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTATAATAGG 2432 || | || ||||||||| |||| ||||| | ||| |||| ||| | |||| || Sbjct 10932926 TCCCCAAGGAGCTCACTTTCTTGCCCAAAGTCTGGATGACGCCCTGAAGCTTATTG-AGC 10932868 Query 2433 ACCAGAATTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGA 2492 |||||||||| || ||| || | | ||| | || ||||| || |||| || | Sbjct 10932867 ACCAGAATTAGCCAGCAAGGTAGACCTGGTGTGGGTCATGGGTGGCAGCGCTGTTTACAA 10932808 Query 2493 GGAGAGC-----ATTA-CAAGATCTTG-CAAACAGATGCTGTTTTTAACAAGGATTCTGC 2545 ||| ||| ||| | || | || ||||| |||| | |||||||| ||| Sbjct 10932807 GGA-AGCCATGGATTGGCCAGGCCATGTCAAAC------TGTTCGTGACAAGGATCATGC 10932755 Query 2546 AAAAATTTGAATGTGATACATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTA 2605 | |||||||| |||| |||| || ||||||||| || | | ||||||| | || Sbjct 10932754 CAGAATTTGAAAGTGACACATGTTTTCCAGAAATTGATTTGAAGAAATACAGGCTCCTCC 10932695 Query 2606 CTGAATTTCCAGGTGTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTG 2665 | ||| |||||||| | |||| || || || || || || |||| |||||||||| Sbjct 10932694 CGAAATACCCAGGTGTGCTTTCTGAGGTCCAGGAGGAGAAAGGCATTAAGTACAAATTTG 10932635 Query 2666 AGATATATGaaaaaaa 2681 | |||||||||| || Sbjct 10932634 AAGTATATGAAAAGAA 10932619 >seq94 Length=11208488 Score = 143 bits (158), Expect = 2e-29 Identities = 368/555 (66%), Gaps = 19/555 (3%) Strand=Plus/Minus Query 2138 CTCTAAACTGTATTGCAGCTGTCTCTGAAAATATGGGCATTGGAAACAAGGGAAAACTGC 2197 |||| ||||| || | ||||| || | || ||||| || || | || | | ||| Sbjct 6850253 CTCTGAACTGCATCGTCGCTGTGTCCCAGAACATGGGTATCGGCAGGAATAGGGACTTGC 6850194 Query 2198 CATGGCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAAATGACATCTTCTTCCACTG 2257 | ||| | || || | |||||||| || |||| || | |||||| | | || | | Sbjct 6850193 CCTGGACCCCGCTCAGGAATGAATTCAACTATTTCCAGAGAATGACCACAACCACCTCAG 6850134 Query 2258 ACTTA---AAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTA 2314 | || |||||| | || | ||||| || ||||| ||||| || |||| | | Sbjct 6850133 TGGAAGGTAAGCAGAATCTGGTGGTAATGGGTAGGAAGACCTGGTTCTCCATTCC--TGA 6850076 Query 2315 AAAGCA--GGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCC 2372 ||| | | |||||||| ||||||| ||| | || |||||||| | || || || || Sbjct 6850075 GAAGAATCGACCTTTGAAAGACAGAATTAATATAGTACTCAGTAGCAAACTCAAGGAACC 6850016 Query 2373 ACCACGTGGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTATAATAGG 2432 || | || ||||||||| |||| ||||| | ||| | || || | |||| Sbjct 6850015 TCCCCAAGGAGCTCACTTTCTTGCCCAAAGTCTGGATGATGCCCTAAAGCTTATTGAGCA 6849956 Query 2433 ACCAGAATTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGA 2492 |||||||||| ||| |||||| | | ||| | | ||||| || |||| || | Sbjct 6849955 ACCAGAATTAGCCAACAAGGTGGACCTGGTGTGGGTCGTGGGTGGCAGCGCTGTTTACAA 6849896 Query 2493 GGAGAGC-----ATTA-CAAGATCTTGCAAACAGATGCTGTTTTTAACAAGGATTCTGCA 2546 ||| ||| || | | || || || || |||||| | |||||||| |||| Sbjct 6849895 GGA-AGCCATGGATCAGCCAGGTCATGTCAA-----GCTGTTCATGACAAGGATCATGCA 6849842 Query 2547 AAAATTTGAATGTGATACATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTAC 2606 |||||||| ||| |||| || ||||||||| || | | ||||||| | || | Sbjct 6849841 GGAATTTGAAAATGACACATTTTTTCCAGAAATTGATTTGAAGAAATACAGGCTTCTCCC 6849782 Query 2607 TGAATTTCCAGGTGTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGA 2666 ||| |||||||| | |||| || | || || || || |||| ||||||||||| Sbjct 6849781 GAAATACCCAGGTGTGCTTTCTGAGGTCTAGGAGGAGAAAGGCATTAAGTACAAATTTGA 6849722 Query 2667 GATATATGaaaaaaa 2681 |||||||||| || Sbjct 6849721 AGTATATGAAAAGAA 6849707 >seq10 Length=29551940 Score = 141 bits (156), Expect = 8e-29 Identities = 365/551 (66%), Gaps = 9/551 (2%) Strand=Plus/Plus Query 2137 ACTCTAAACTGTATTGCAGCTGTCTCTGAAAATATGGGCATTGGAAACAAGGGAAAACTG 2196 ||||| ||||| |||| || || || | || ||||| || || | || || | || Sbjct 24703031 ACTCTGAACTGCATTGTCGCCGTGTCCCAGAACATGGGTATCGGCAGGAACGGGGACTTG 24703090 Query 2197 CCATGGCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAAATGACATCTTCTTCCACT 2256 || ||||| | || | |||||||| || | || || | |||||| | | || | Sbjct 24703091 CCCTGGCCCCTGCTCAGGAATGAATTCAACTACTTCCAGAGAATGACCACAACCACCTCA 24703150 Query 2257 GACTTA---AAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATT 2313 | | ||||||||| | || | ||| | |||||||| ||||| || |||| | Sbjct 24703151 GTGGAAGGTAAACAGAATCTGGTGGTAATGAGTAGAAAGACCTGGTTCTCCATTCC--TG 24703208 Query 2314 AAAAGCA--GGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGC 2371 | ||| | | |||||||| ||||||| ||| | || ||||||||| | || || || | Sbjct 24703209 AGAAGAATCGCCCTTTGAAAGACAGAATTAATATAGTACTCAGTAGAGAACTCAAGGAAC 24703268 Query 2372 CACCACGTGGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTATAATAG 2431 | || | || ||| ||||| |||| |||| | ||| | || ||| | |||| || Sbjct 24703269 CTCCCCAAGGAGCTGACTTTCTTGCCCCAAGTCTGGATGATGCCCTGAAGCTTATCG-AG 24703327 Query 2432 GA-CCAGAATTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTAT 2490 | ||||||||| || |||||| | | || | | ||||| || |||| || Sbjct 24703328 CAGCCAGAATTAGCCAGCAAGGTGGACCTGGTGGGGGTTGTGGGTGGCAGCGCTGTTTAC 24703387 Query 2491 GAGGAGAGCATTACAAGATCTTGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAA 2550 |||| ||| | | || | | ||||| | |||||||| |||| || Sbjct 24703388 AAGGAAGCCATGGATCGGCCGGGCCATGTCAAACTGTTCGTGACAAGGATCATGCAGGAA 24703447 Query 2551 TTTGAATGTGATACATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGAA 2610 |||||| |||| |||| || ||||||||| || | | ||||||| | || | || Sbjct 24703448 TTTGAAAGTGACACATTTTTTCCAGAAATTGATTTGAAGAAATACAGGCTCCTCCCAAAA 24703507 Query 2611 TTTCCAGGTGTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATA 2670 | |||||||| | |||| || || || || || || |||| ||||||||||| || Sbjct 24703508 TACCCAGGTGTGCTTTCTGAGGTCCAGGAGGAGAAAGGCATTAAGTACAAATTTGAAGTA 24703567 Query 2671 TATGaaaaaaa 2681 |||||||| || Sbjct 24703568 TATGAAAAGAA 24703578 >seq20 Length=23447253 Score = 140 bits (154), Expect = 3e-28 Identities = 287/422 (68%), Gaps = 6/422 (1%) Strand=Plus/Minus Query 2263 AAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAAAAGCA-- 2320 ||||||||| | || | ||||| || ||||| ||||| || |||| | | ||| | Sbjct 11127268 AAACAGAATCTGGTGGTAATGGGTAGGAAGACCTGGTTCTCCATTCC--TGAGAAGAATC 11127211 Query 2321 GGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCACCACGTG 2380 | |||||||| ||||||| ||| | || ||||||||| | || || || || || | | Sbjct 11127210 GCCCTTTGAAAGACAGAATTAATATAGTACTCAGTAGAGAACTCAAGGAACCTCCCCAAG 11127151 Query 2381 GGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTATAATAGGA-CCAGAA 2439 | ||||| ||| |||| |||| | ||| |||| ||| | |||| || | |||||| Sbjct 11127150 GAGCTCATTTTCTTGCCCCAAGTCTGGATGACGCCCTGAAGCTTATCG-AGCAGCCAGAA 11127092 Query 2440 TTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAGGAGAGC 2499 ||| || |||||| | | ||| | | ||||| || | || || |||| | Sbjct 11127091 TTAGCCAGCAAGGTGGACCTGGTGTGGGTTGTGGGTGGCAGCGCCGTTTACAAGGAAGCC 11127032 Query 2500 ATTACAAGATCTTGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAATTTGAATGT 2559 || | | || | | ||||| || |||||||| |||| |||||||| || Sbjct 11127031 ATGGATCGGCCAGGCCATGTCAAACTGTTCTTGACAAGGATCATGCAGGAATTTGAAAGT 11126972 Query 2560 GATACATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGAATTTCCAGGT 2619 || |||| || ||||||||| || | | ||||||| | || | ||| |||||| Sbjct 11126971 GACACATTTTTTCCAGAAATTGATTTGAAGAAATACAGGCTCCTCCCAAAATACCCAGGT 11126912 Query 2620 GTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATATATGaaaaa 2679 || | |||| || || || || || || |||| ||||||||||| |||||||||| Sbjct 11126911 GTGCTTTCTGAGGTCCAGGAGGAGAAAGGCATTAAGTACAAATTTGAAGTATATGAAAAG 11126852 Query 2680 aa 2681 || Sbjct 11126851 AA 11126850 >seq11 Length=28182674 Score = 140 bits (154), Expect = 3e-28 Identities = 364/550 (66%), Gaps = 9/550 (2%) Strand=Plus/Plus Query 2138 CTCTAAACTGTATTGCAGCTGTCTCTGAAAATATGGGCATTGGAAACAAGGGAAAACTGC 2197 |||| ||||| || | || || || | || ||||| || || | || || | ||| Sbjct 11213496 CTCTGAACTGCATCGTCGCCGTGTCCCAGAACATGGGTATCGGCAGGAACGGGGACTTGC 11213555 Query 2198 CATGGCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAAATGACATCTTCTTCCACTG 2257 | ||||| || || | |||||||| || | || || | |||||| | | || | | Sbjct 11213556 CCTGGCCCCCGCTCAGGAATGAATTCAACTACTTCCAGAGAATGACCACAACCACCTCAG 11213615 Query 2258 ACTTA---AAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTA 2314 | ||||||||| | || | ||||| || ||||| ||||| || |||| | | Sbjct 11213616 TGGAAGGTAAACAGAATCTGGTGGTAATGGGTAGGAAGACTTGGTTCTCCATTCC--TGA 11213673 Query 2315 AAAGCA--GGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCC 2372 ||| | | |||||||| ||||||| ||| | || ||||||||| | || || || || Sbjct 11213674 GAAGAATCGCCCTTTGAAAGACAGAATTAATATAGTACTCAGTAGAGAACTCAAGGAACC 11213733 Query 2373 ACCACGTGGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTATAATAGG 2432 || | || ||||| ||| |||| |||| | ||| |||| ||| | |||| || Sbjct 11213734 TCCCCAAGGAGCTCATTTTCTTGCCCCAAGTCTGGATGACGCCCTGAAGCTTATCG-AGC 11213792 Query 2433 A-CCAGAATTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATG 2491 | ||||||||| || |||||| | | || | | ||||| || | || || Sbjct 11213793 AGCCAGAATTAGCCAGCAAGGTGGACCTGGTGTGAGTTGTGGGTGGCAGCGCCGTTTACA 11213852 Query 2492 AGGAGAGCATTACAAGATCTTGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAAT 2551 |||| ||| | | || | | ||||| || |||||||| |||| ||| Sbjct 11213853 AGGAAGCCATGGATCGGCCAGGCCATGTCAAACTGTTCTTGACAAGGATCATGCAGGAAT 11213912 Query 2552 TTGAATGTGATACATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGAAT 2611 ||||| |||| |||| || ||||||||| || | | ||||||| | || | ||| Sbjct 11213913 TTGAAAGTGACACATTTTTTCCAGAAATTGATTTGAAGAAATACAGGCTCCTCCCAAAAT 11213972 Query 2612 TTCCAGGTGTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATAT 2671 |||||||| | |||| || || || || || || ||| ||||||||||| ||| Sbjct 11213973 ACCCAGGTGTGCTTTCTGAGGTCCAGGAGGAGAAAGGCATTCAGTACAAATTTGAAGTAT 11214032 Query 2672 ATGaaaaaaa 2681 ||||||| || Sbjct 11214033 ATGAAAAGAA 11214042 >seq272 Length=2648510 Score = 134 bits (148), Expect = 1e-26 Identities = 292/429 (68%), Gaps = 20/429 (5%) Strand=Plus/Minus Query 2263 AAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAAAAGCA-- 2320 ||||||||| | || | ||||| || ||||| ||||| || |||| | | ||| | Sbjct 1736552 AAACAGAATCTGGTGGTAATGGGTAGGAAGACCTGGTTCTCCATTCC--TGAGAAGAATC 1736495 Query 2321 GGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCACCACGTG 2380 | |||||||| ||||||| ||| | || ||||||||| | || || || || || | | Sbjct 1736494 GCCCTTTGAAAGACAGAATTAATATAGTACTCAGTAGAGAACTCAAGGAACCTCCCCAAG 1736435 Query 2381 GGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTATAATAGGA-CCAGAA 2439 | ||||||||| |||| ||||| | ||| |||| ||| | ||| || | |||||| Sbjct 1736434 GAGCTCACTTTCTTGCCCAAAGTCTGGATGACGCCCTGAAGCTTACTG-AGCAGCCAGAA 1736376 Query 2440 TTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAGGAGAGC 2499 ||| | || |||||| | | | | | | ||||| || | | || |||| ||| Sbjct 1736375 TTAGACAGCAAGGTGGACCTGGTGTTGGTTGTGGGTGGCAGCGCCATTTACAAGGA-AGC 1736317 Query 2500 -----ATTA-CAAGATCTTG-CAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAATT 2552 || | | || | || ||||| | || | |||||||| |||| |||| Sbjct 1736316 CATGGATCAGCCAGGGCATGTCAAAC------TTTTCGTGACAAGGATCATGCAGGAATT 1736263 Query 2553 TGAATGTGATACATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGAATT 2612 |||| |||| |||| || ||||||||| || | | |||||||| || | ||| Sbjct 1736262 TGAAAGTGACACATTTTTTCCAGAAATTGATTTGAAGAAATACAAGATCCTCCCAAAATA 1736203 Query 2613 TCCAGGTGTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATATA 2672 |||||||| || |||| || || || || || | |||| ||||||||||| |||| Sbjct 1736202 CCCAGGTGTGCCTTCTGAGGTCCATGAGGAGAAAAGCATTAAGTACAAATTTGAAGTATA 1736143 Query 2673 TGaaaaaaa 2681 |||||| || Sbjct 1736142 TGAAAAGAA 1736134 >seq74 Length=13126430 Score = 132 bits (146), Expect = 4e-26 Identities = 402/615 (65%), Gaps = 31/615 (5%) Strand=Plus/Plus Query 118461 GAGT-TTCAGTGGCTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGA 118519 |||| ||||| |||| |||||||||| |||| ||| || || || | || || | || Sbjct 9227918 GAGTCTTCAGCGGCTTGATGTGATTCAGGTAGATATGTGCGTCTCCCAAAGTGTGCACGA 9227977 Query 118520 ATTCACCAGGTGTAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGG 118579 | || || || | || ||||| | ||| || | |||||| || | || | |||||| Sbjct 9227978 AGTCTCCTGGCTTCAGGCCTGTGACGTGCGCGACCATGTAGGTGAGCAGCGCGCAGCTGG 9228037 Query 118580 CTACATTAAAAGGAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGA 118639 | | || || || || ||||| |||||||| |||| | |||||||| ||||| || | Sbjct 9228038 CGATGTTGAAGGGTACGCCCAGGCCCATGTCCCCTGACCGCTGGTACAGCTGGCAGGACA 9228097 Query 118640 GCTCCCCGTTTGCAACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCAT----- 118694 |||||||||| | || || ||||| | | | |||| || |||||||| |||| Sbjct 9228098 GCTCCCCGTTCACCACGTAGAACTGGCACAGGGTGTGGCAGGGAGGCAGCGCCATCAGAG 9228157 Query 118695 GGAACTCAGTTGGGCAGGATTCCAGGCTGTTAAAACATG-----CCTTCTGCTATATGGT 118749 ||| || ||||| |||||||| | ||||| ||||||| | || Sbjct 9228158 GGAGATCTTTTGGG-----TTCCAGGC-----ACACATGATGATCCTTCTGTCGTTAGGG 9228207 Query 118750 TCTACCTGTATACCCTCAATTAAATTCTGAATCTGATCCACACCCTTTCC--AGTATACT 118807 || | || | || | ||||| | ||| || || || | || |||| || Sbjct 9228208 TCGGTTTTGATGGTGTTGATCACGTTCTGCAGCTGGTCAACTCCTTGACCCGAGTAATCT 9228267 Query 118808 GAGACTCGCATCCTTTATATTCTGCCCCAAAAAATCTCCATTGAAAACCATAAACAGGCC 118867 ||| | || || |||| || |||||||| ||| ||||| || || ||||| || || | Sbjct 9228268 GAGTC-CGTAT-CTTTGTAGTCTGCCCCGAAATGCCTCCACTGGAAGCCATAGACGGGGC 9228325 Query 118868 CCAGAT---CTCCCTGGGACCTAAAATCTAAACCTACTTTTCTCTGAAATTCTTTTGACC 118924 |||| | || | | | ||| || || || | | | | || || |||| Sbjct 9228326 CCAGGTCCCCTTCTTTGCGGCTAGAA---AACCCCAGGCTGTCCAGGAAATCCCGGGACC 9228382 Query 118925 CATTAGCATTCCAAATAGCAACTCCtttttttGCCAGATCATTAGAGTTTGTAGAACCAC 118984 |||| |||| ||| || |||||||| || ||| || || | |||||||| || Sbjct 9228383 CATTGGCATCCCAGATCTTCACTCCTTTGGATGACAGCTCCTTGGCATTTGTAGATCCCT 9228442 Query 118985 TTAAAAACCAAAGAAGCTCCTCAACAACGCCTCTCCAAAAAACTGTTTTTGTTGTAAACA 119044 | | |||||| || ||||| || | || || |||| || || || || || | || Sbjct 9228443 TGATAAACCACAGCAGCTCTTCCAGAATACCCTTCCAGAATACACGCTTGGTGGTCAGCA 9228502 Query 119045 GTGGAAACTGACCTC 119059 | ||||| | | ||| Sbjct 9228503 GGGGAAATTCATCTC 9228517 >seq125 Length=9353109 Score = 131 bits (144), Expect = 1e-25 Identities = 285/422 (68%), Gaps = 6/422 (1%) Strand=Plus/Minus Query 2263 AAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAAAAGCA-- 2320 ||||||||| | || | ||||| || ||||| ||||| || |||| | | ||| | Sbjct 7288592 AAACAGAATCTGGTGGTAATGGGTAGGAAGACTTGGTTCTCCATTCC--TGAGAAGAATC 7288535 Query 2321 GGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCACCACGTG 2380 | |||||||| ||||||| ||| | || ||||||||| | || || || || || | | Sbjct 7288534 GCCCTTTGAAAGACAGAATTAATATAGTACTCAGTAGAGAACTCAAGGAACCTCCCCAAG 7288475 Query 2381 GGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTATAATAGGA-CCAGAA 2439 | ||||| ||| |||| |||| | ||| || | ||| | |||| || | |||||| Sbjct 7288474 GAGCTCATTTTCTTGCCCCAAGTCTGGATGACACCCTGAAGCTTATCG-AGCAGCCAGAA 7288416 Query 2440 TTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAGGAGAGC 2499 ||| || |||||| | | ||| | | ||||| || | || || |||| | Sbjct 7288415 TTAGCCAGCAAGGTGGACCTGGTGTGGGTTGTGGGTGGCAGGGCCGTTTACAAGGAAGCC 7288356 Query 2500 ATTACAAGATCTTGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAATTTGAATGT 2559 || | | || | | ||||| || |||||||| |||| |||||||| || Sbjct 7288355 ATGGATCGGCCAGGCCATGTCAAACTGTTCTTGACAAGGATCATGCAGGAATTTGAAAGT 7288296 Query 2560 GATACATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGAATTTCCAGGT 2619 || |||| || ||||||||| || | | ||||||| | || | ||| |||||| Sbjct 7288295 GACACATTTTTTCCAGAAATTGATTTGAAGAAATACAGGCTCCTCCCAAAATACCCAGGT 7288236 Query 2620 GTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATATATGaaaaa 2679 || |||| || || || || || || |||| ||||||||||| |||||||||| Sbjct 7288235 GTGTTTTCTGAGGTCCAGGAGGAGAAAGGCATTAAGTACAAATTTGAAGTATATGAAAAG 7288176 Query 2680 aa 2681 || Sbjct 7288175 AA 7288174 >seq18 Length=24717988 Score = 122 bits (134), Expect = 7e-23 Identities = 286/426 (67%), Gaps = 13/426 (3%) Strand=Plus/Minus Query 2263 AAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAA-AAGCAG 2321 ||||||||| | || | | ||| || ||||| |||| || |||| || || || Sbjct 15297050 AAACAGAATCTGGTGGTAACGGGTAGGAAGACCAGGTTCTCCATTCCTGAGAAGAATCAA 15296991 Query 2322 GCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCACCACGTGG 2381 |||||||| ||||| | ||| | || ||||||||| | || || | || || | || Sbjct 15296990 -CCTTTGAAAGACAGAGTTAATATAGTACTCAGTAGAGAGCTCAAGGGACCTCCCCAAGG 15296932 Query 2382 GGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTATAATAGGACCAGAATT 2441 | ||||||| |||| ||||| | ||| |||| ||| | |||| ||||||||| Sbjct 15296931 AGGTCACTTTCTTGCCCAAAGTCTGGATGACGCCCTGAAGCTTATTGAGCAACCAGAATT 15296872 Query 2442 AAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAGGAGAGCAT 2501 | || |||||| | | ||| | || ||||| || | || || |||| ||| Sbjct 15296871 AGCCAGCAAGGTGGACCTGGTGTGGGTCATGGGTGGCAGCGCCGTTTACAAGGAAGCCAT 15296812 Query 2502 TACAAGATCTTGCAAACAGATG-----CTGTTTTTAACAAGGATTCTGCAAAAATTTGAA 2556 ||||| || | ||| ||||| | |||||||| |||| |||||||| Sbjct 15296811 ----AGATCGGCCAGGCC-ATGTCAAACTGTTGGTGACAAGGATCATGCAGGAATTTGAA 15296757 Query 2557 TGTGATACATACTTC-CCAGAAATTAATCTTACCAAATACAAACAACTTACTGAATTTCC 2615 |||| |||| || ||||||||| || | | |||||||| | || | ||| || Sbjct 15296756 AGTGACACATTTTTTTCCAGAAATTGATTTGAAGAAATACAAGCTTCTCCCAAAATACCC 15296697 Query 2616 AGGTGTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATATATGa 2675 |||||| |||| || || || || || || |||| ||||||||||| ||||||| Sbjct 15296696 AGGTGTGTTTTCTGAGGTCCAGGAGGAGAACGGCATTAAGTACAAATTTGAAGTATATGA 15296637 Query 2676 aaaaaa 2681 ||| || Sbjct 15296636 AAAGAA 15296631 >seq12 Length=28755977 Score = 113 bits (124), Expect = 4e-20 Identities = 324/493 (66%), Gaps = 18/493 (4%) Strand=Plus/Minus Query 2195 TGCCATGGCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAAATGACATCTTCTTCCA 2254 |||| ||||| || || | |||||||| || |||| || | |||||| | | || Sbjct 14868531 TGCCCTGGCCCCCGCTCAGGAATGAATTCAACTATTTCCAGAGAATGACCACAACCACCT 14868472 Query 2255 CTGACTTA---AAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCA 2311 | | | ||||||||| | || | ||||| || ||| | ||||| || |||| Sbjct 14868471 CAGTGGAAGGTAAACAGAATCTGGTGGTAATGGGCAGGAAGCCCTGGTTCTCCATTCC-- 14868414 Query 2312 TTAAAAGCA--GGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGA 2369 | | ||| | | |||||||| ||||| | ||| | ||||||||| | || || || Sbjct 14868413 TGAGAAGAATTGACCTTTGAAAGACAGACTTAATAAAATACTCAGTAGAGAACTCAAGGA 14868354 Query 2370 GCCACCACGTGGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTATAAT 2429 || || | || ||||||||| |||| ||||| | ||| | | ||| | |||| Sbjct 14868353 ACCTCCCCAAGGAGCTCACTTTCTTGCCCAAAGTCTGGATGATTCCCTGAAGCTTATTG- 14868295 Query 2430 AGGAC-CAGAATTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCT 2488 || | |||||||| || | |||| | | ||| | | ||||| ||| | || | Sbjct 14868294 AGCAGACAGAATTAGCCAGCAAGATGGACCTGGTGTGGGTTGTGGGTGGCAGAGCCGTTT 14868235 Query 2489 ATGAGGAGAGCATTACAAGATCTTGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAA 2548 | ||| || | || | || ||| |||||| | |||||||| |||| Sbjct 14868234 ACATGGATAGG----CCAGGCCATGTAAAA-----CTGTTTGTGACAAGGATCATGCAGG 14868184 Query 2549 AATTTGAATGTGATACATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTG 2608 |||||||| |||| |||| || |||||| || || | | ||||||| | || | Sbjct 14868183 AATTTGAAAGTGACACATTTTTTCCAGAATTTGATTTGAAGAAATACAGGCTCCTCCCGA 14868124 Query 2609 AATTTCCAGGTGTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGA 2668 ||| |||||||| | | || || || || || || || || | ||||||||||| Sbjct 14868123 AATACCCAGGTGTGCTTTGTGAAGTCCAGGAGGAGAAAGGCATGAAGTACAAATTTGAAG 14868064 Query 2669 TATATGaaaaaaa 2681 |||||||||| || Sbjct 14868063 TATATGAAAAGAA 14868051 >seq97 Length=11343139 Score = 109 bits (120), Expect = 5e-19 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 3245 GTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAG 3304 || || || ||||||||| | |||||||| |||||||| | ||||| || ||||||||| Sbjct 7580202 GTGGTGGAGGAGCTCTTCAGGGATGGGGTGAACTGGGGAAGGATTGTGGCCTTCTTTGAG 7580261 Query 3305 TTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAAC 3364 || ||||| || ||||||||||| || ||||| | | || | |||| || |||||| Sbjct 7580262 TTCGGTGGGGTCATGTGTGTGGAGAGTGTCAACCGGGAGATGTCGCCCCTGGTGGACAAC 7580321 Query 3365 ATTGCCGCGTGGATGACAGA 3384 || ||| |||||||| || Sbjct 7580322 ATCGCCCTCTGGATGACCGA 7580341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414440758004140