Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octodon_20degus_20[refseq_20GCF_5F000260255.1_202012-05-01] 7,135 sequences; 2,995,889,303 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq269 116 3e-21 seq77 116 3e-21 seq39 116 3e-21 seq223 113 4e-20 seq203 113 4e-20 seq194 113 4e-20 seq57 113 4e-20 seq27 113 4e-20 seq547 107 2e-18 seq81 107 2e-18 seq64 107 2e-18 seq1 107 2e-18 seq153 104 2e-17 seq142 104 2e-17 seq44 104 2e-17 seq94 102 7e-17 seq89 100 2e-16 seq20 100 2e-16 seq112 95.1 1e-14 seq16 95.1 1e-14 seq10 95.1 1e-14 seq35 91.5 1e-13 seq45 89.7 4e-13 seq197 87.8 2e-12 seq11 87.8 2e-12 seq26 86.0 5e-12 >seq269 Length=2777306 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || |||| | ||| | ||||| || || ||| ||||||||| || || || || | Sbjct 127414 CCACCTCGCAGGCGAAGCACCAGGTGCAGGGTGGACTCTTTTTGGATGTTGTAGTCAGAG 127473 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || | || || || |||||||| |||||||| |||||||||||||| | ||| Sbjct 127474 AGGGTCCGCCCATCCTCCAGTTGTTTGCCAGCAAATATCAGACGCTGCTGGTCAGGGGGG 127533 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || ||| ||||| |||||| ||||| || | | || || || | ||| || Sbjct 127534 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCGATGGTGTCACTGGGCTCAACC 127593 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | ||||| | || |||||||| || || |||||||| ||||| Sbjct 127594 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 127640 >seq77 Length=11908039 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || |||| | ||| | ||||| || || ||| ||||||||| || || || || | Sbjct 9797142 CCACCTCGCAGGCGAAGCACCAGGTGCAGGGTGGACTCTTTTTGGATGTTGTAGTCAGAG 9797083 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || | || || || |||||||| |||||||| |||||||||||||| | ||| Sbjct 9797082 AGGGTCCGCCCATCCTCCAGTTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGGGGG 9797023 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || ||| ||||| |||||| ||||| || | | || || || | ||| || Sbjct 9797022 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCGATGGTGTCACTGGGCTCAACC 9796963 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | ||||| | || |||||||| || || |||||||| ||||| Sbjct 9796962 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 9796916 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||||||||| || || || || | || || || | | || || |||||||| ||||| Sbjct 1382805 CTCTTTTTGGATGTTGTAGTCAGAGAGGGTCCGCCCACCCTCCAGTTGTTTGCCGGCAAA 1382864 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 ||| |||||||||||||| | ||| | || ||| |||| |||||| ||||| | Sbjct 1382865 TATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCGTGTCTTGGATTTTGGCTTTGACATT 1382924 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || || || | ||| || || | ||||| | || |||||||| || || || Sbjct 1382925 CTCGATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 1382984 Query 39273 AAAGATTTGCAT 39284 |||||| ||||| Sbjct 1382985 AAAGATCTGCAT 1382996 >seq39 Length=16355505 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || |||| | ||| | ||||| || || ||| ||||||||| || || || || | Sbjct 140867 CCACCTCGCAGGCGAAGCACCAGGTGCAGGGTGGACTCTTTTTGGATGTTGTAGTCAGAG 140808 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || | || || || |||||||| |||||||| |||||||||||||| | ||| Sbjct 140807 AGGGTCCGCCCATCCTCCAGTTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGGGGG 140748 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || ||| ||||| |||||| ||||| || | | || || || | ||| || Sbjct 140747 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCGATGGTGTCACTGGGCTCAACC 140688 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | ||||| | || |||||||| || || |||||||| ||||| Sbjct 140687 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 140641 >seq223 Length=3887406 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || |||| | ||| | ||||| || || ||| ||||||||| || || || || | Sbjct 513956 CCACCTCGCAGGCGAAGCACCAGGTGCAGGGTGGACTCTTTTTGGATGTTGTAGTCAGAG 513897 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || | || || || ||||||| |||||||| |||||||||||||| | ||| Sbjct 513896 AGGGTCCGCCCATCCTCCAGTTGTTTGCTGGCAAATATGAGACGCTGCTGGTCAGGGGGG 513837 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || ||| ||||| |||||| ||||| | ||| || || || | ||| || Sbjct 513836 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATCCTCCATGGTGTCACTGGGCTCAACC 513777 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | ||||| | || |||||||| || || |||||||| ||||| Sbjct 513776 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 513730 >seq203 Length=4329578 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || |||| | ||| | ||||| || || ||| ||||||||| || || || || | Sbjct 2029562 CCACCTCGCAGGCGAAGCACCAGGTGCAGGGTGGACTCTTTTTGGATGTTGTAGTCAGAG 2029621 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || | || || | |||||||| |||||||| |||||||||||||| | ||| Sbjct 2029622 AGGGTCCGCCCATCCTCCCGTTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGAGGGG 2029681 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || ||| ||||| |||| | ||||| || | | || || || | ||| || Sbjct 2029682 ATGCCCTCCTTGTCTTGGATTCTGGCTTTGACATTCTCGATGGTGTCACTGGGCTCAACC 2029741 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | ||||| |||| |||||||| || || |||||||| ||||| Sbjct 2029742 TCGAGGGTGATGGTTTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 2029788 >seq194 Length=4322719 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || |||| | ||| | ||| | || || ||| |||| |||| || || || || | Sbjct 672921 CCACCTCGCAGGCGAAGCACTAGGTGCAGGGTGGACTCTCTTTGGATGTTGTAGTCAGAG 672862 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || | || || || |||||||| |||||||| |||||||||||||||| ||| Sbjct 672861 AGGGTCCGCCCATCCTCCAGGTGTTTGCCGGCAAATATCAGACGCTGCTGGTCGGGGGGG 672802 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || ||| |||| |||||| ||||| || | | || ||||| | ||| || Sbjct 672801 ATGCCCTCCGTGTCTTGGATTTTGGCTTTGACATTCTCGATGGTGTCGCTGGGCTCAACC 672742 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | ||||| | || |||||||| || || |||||||| ||||| Sbjct 672741 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 672695 >seq57 Length=13618965 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || |||| | ||| | ||||| || || ||| |||||| || || || || || | Sbjct 4324825 CCACCTCGCAGGCGAAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAG 4324884 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || | || || || |||||||| |||||||| |||||||||||||| | ||| Sbjct 4324885 AGGGTCCGCCCATCCTCCAGTTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGGGGG 4324944 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || ||| ||||| |||||| ||||| || | | || || || | ||| || Sbjct 4324945 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCGATGGTGTCACTGGGCTCAACC 4325004 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | ||||| | || |||||||| || || |||||||| ||||| Sbjct 4325005 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 4325051 >seq27 Length=19580306 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || |||| | ||| | ||||| | || ||| ||||||||| || || || || | Sbjct 1542511 CCACCTCGCAGGCGAAGCACCAGGCGCAGGGTGGACTCTTTTTGGATGTTGTAGTCAGAG 1542570 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || | || || || |||||||| |||||||| |||||||||||||| | ||| Sbjct 1542571 AGGGTCCGCCCATCCTCCAGTTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGGGGG 1542630 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || ||| ||||| |||||| ||||| || | | || || || | ||| || Sbjct 1542631 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCGATGGTGTCACTGGGCTCAACC 1542690 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | ||||| | || |||||||| || || |||||||| ||||| Sbjct 1542691 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1542737 >seq547 Length=128482 Score = 107 bits (118), Expect = 2e-18 Identities = 158/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 39061 CCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGT 39120 |||| | ||| | ||||| || || ||| ||||||||| || | || || | || Sbjct 109123 CCTCCCAGGCGAAGCACCAGGTGCAGGGTGGACTCTTTTTGGATGATGTAGTCAGAGAGG 109064 Query 39121 GTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACG 39180 || || | || || || |||||||| |||||||| |||||||||||||| | ||| | | Sbjct 109063 GTCCGCCCATCCTCCAGTTGTTTGCCAGCAAATATCAGACGCTGCTGGTCAGGGGGAATG 109004 Query 39181 CTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCC 39240 | ||| ||||| |||||| ||||| || | | || || | | ||| || || Sbjct 109003 CCCTCCTTGTCTTAGATTTTGGCTTTGACATTCTCGATGGTGTCACCGGGCTCAACCTCG 108944 Query 39241 ACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | ||||| | || |||||||| || || |||||||| ||||| Sbjct 108943 AGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 108900 >seq81 Length=13202860 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || |||| | ||| | ||||| || || ||| ||||||||| || || || || | Sbjct 8945330 CCACCTCGCAGGCGAAGCACCAGGTGCAGGGTGGACTCTTTTTGGATGTTGTAGTCAGAG 8945271 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGG 39176 || || || | || | || |||||||| |||||||| |||||||||||||| |||||| Sbjct 8945270 AGGGTCCGACCATCCGCCAGTTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGGG 8945211 Query 39177 CACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCAC 39236 | || ||| ||||| |||||| ||||| || | | || || || | ||| || Sbjct 8945210 -ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCAAC 8945152 Query 39237 GTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | | ||||| | || |||||||| || || |||||||| ||||| Sbjct 8945151 CTTGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 8945104 >seq64 Length=12756018 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || |||| | ||| | ||||| || || ||| |||| |||| || || || || | Sbjct 12044638 CCACCTCGCAGGCGAAGCACCAGGTGCAGGGTGGACTCTCTTTGGATGTTGTAGTCAGAG 12044697 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || | | || || |||||||| |||||||| |||||||||||||| | ||| Sbjct 12044698 AGGGTCCGACCACCCTCCAGTTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGGGGG 12044757 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || ||| ||||| |||||| ||||| || | | || || || | ||| || Sbjct 12044758 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCGATGGTGTCACTGGGCTCAACC 12044817 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | ||||| | || |||||||| || || |||||||| ||||| Sbjct 12044818 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 12044864 >seq1 Length=41204401 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || |||| | ||| | ||||| || || | | ||||||||| || || || || | | Sbjct 11620213 CCACCTCGCAGGCGAAGCACCAGGTGCAGGGCGGACTCTTTTTGGATGTTGTAGTCAGAA 11620154 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGG 39176 || || || | || || || ||||||| |||||||| |||||||||||||| |||||| Sbjct 11620153 AGGGTCCGCCCATCCTCCAGTTGTTTGCTGGCAAATATCAGACGCTGCTGGTCAGGTGGG 11620094 Query 39177 CACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCAC 39236 | || ||| ||||| |||||| ||||| || | | || || || | ||| || Sbjct 11620093 -ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCGATGGTGTCACTGGGCTCAAC 11620035 Query 39237 GTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | ||||| | || |||||||| || || ||||| || ||||| Sbjct 11620034 CTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAAATCTGCAT 11619987 >seq153 Length=6577703 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || |||| | ||| | ||||| || || ||| |||| |||| || || || || | Sbjct 477279 CCACCTCGCAGGCGAAGCACCAGGTGCAGGGTGGACTCTCTTTGGATGTTGTAGTCAGAG 477220 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || | || || || |||||||| |||||||| |||||||||||||| | ||| Sbjct 477219 AGGGTCCGCCCATCCTCCAGTTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGGGGG 477160 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || ||| ||||| |||||| ||||| || | | || || || | ||| || Sbjct 477159 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCGATGGTGTCACTGGGCTCAACC 477100 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | ||||| | || || ||||| || || |||||||| || || Sbjct 477099 TCGAGGGTGATGGTCTTGCCTGTCAGGGTCTTTACAAAGATCTGTAT 477053 >seq142 Length=8229870 Score = 104 bits (114), Expect = 2e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 39085 AGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTG 39144 || ||| ||||||||| || || || || | || ||||| | || || || |||||| Sbjct 4403845 AGGGTGGACTCTTTTTGGATGTTGTAGTCAGAGAGCGTTCGACCATCCTCCAGTTGTTTG 4403904 Query 39145 CCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGT 39204 || |||||||| |||||||||||||| | ||| | || ||| ||||| |||| | | Sbjct 4403905 CCGGCAAATATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATTCTGGCT 4403964 Query 39205 TTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGC 39264 |||| || | | || || || | ||| || || | ||||| | || ||| |||| Sbjct 4403965 TTGACATTCTCGATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTGCCCATCAGG 4404024 Query 39265 GTTTTAACAAAGATTTGCAT 39284 || || |||||||| ||||| Sbjct 4404025 GTCTTCACAAAGATCTGCAT 4404044 >seq44 Length=15303848 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || |||| | ||| | ||||| | || ||| ||||||| | || || || || | Sbjct 13071630 CCACCTCGCAGGCGAAGCACCAGGCGCAGGGTGGACTCTTTTCGGATGTTGTAGTCAGAG 13071689 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || | || || || |||||||| |||||||| |||||||||||||| | ||| Sbjct 13071690 AGGGTCCGCCCATCCTCCAGTTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGGGGG 13071749 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || ||| |||| |||||| ||||| || | | || || || | ||| || Sbjct 13071750 ATGCCCTCCGTGTCTTGGATTTTGGCTTTGACATTCTCGATGGTGTCACTGGGCTCAACC 13071809 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | ||||| | || |||||||| || || |||||||| ||||| Sbjct 13071810 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 13071856 >seq94 Length=11208488 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || |||| | ||| | ||||| || || ||| ||||||||| || || || || | Sbjct 5696075 CCACCTCGCAGGCGAAGCACCAGGTGCAGGGTGGACTCTTTTTGGATGTTGTAGTCAGAG 5696134 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGG 39176 || || || | || || || |||||| |||||||| |||||||||||||| |||||| Sbjct 5696135 AGGGTCCGCCCATCCTCCAGTAGTTTGCTGGCAAATATCAGACGCTGCTGGTCAGGTGGG 5696194 Query 39177 CACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCAC 39236 | || ||| ||||| |||||| |||| || | | || || || | ||| || Sbjct 5696195 -ATGCCCTCCTTGTCTTGGATTTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCAAC 5696253 Query 39237 GTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | ||||| | || |||||||| || || |||||||| ||||| Sbjct 5696254 CTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 5696301 >seq89 Length=10879206 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||||| || || ||| ||||||||| || || || || | || || || | || || Sbjct 2253205 CACCAGGTGCAGGGTGGACTCTTTTTGGATGTTGTAGTCAGAGAGGGTCCGCCCATCCTC 2253264 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 || |||||||| |||||||| |||||||||||||| | ||| | || ||| ||||| Sbjct 2253265 CAGTTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTG 2253324 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 |||||| ||||| || | || || || | ||| || | | ||||| | || Sbjct 2253325 GATTTTGGCTTTGACATTCTTGATGGTGTCACTGGGCTCAACCTTGAGGGTGATGGTCTT 2253384 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || ||||| || || |||||||| ||||| Sbjct 2253385 GCCTGTCAGGGTCTTCACAAAGATCTGCAT 2253414 >seq20 Length=23447253 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || ||| ||||||||| || || || || | ||| || || | || || Sbjct 21063627 ACCAAGTGCAGAGTGGACTCTTTTTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCC 21063686 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| || || || || | ||||||||| | || | || ||||| ||| | Sbjct 21063687 AGCTGCTTGCCTGCGAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCTTTATCCTGG 21063746 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 || || || | || | | || || || | |||||| |||| ||||| | || Sbjct 21063747 ATCTTGGCCTTCACGTTCTCAATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTG 21063806 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCATCTTTAC 39290 |||||||| || || |||||||||||||| || || Sbjct 21063807 CCCGTCAGGGTCTTCACAAAGATTTGCATTTTGAC 21063841 >seq112 Length=9543340 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || || || |||||||| |||||||| |||||||||||||| | ||| | || ||| ||| Sbjct 6075853 TCCTCCAGTTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTG 6075912 Query 39190 TCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATA 39249 || |||||| ||||| || | | || || || | ||| || || | ||||| Sbjct 6075913 TCTTGGATTTTGGCTTTGACATTCTCGATGGTGTCACTGGGCTCAACCTCGAGGGTGATG 6075972 Query 39250 CTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || |||||||| || || |||||||| ||||| Sbjct 6075973 GTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 6076007 >seq16 Length=26446888 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || || || |||||||| |||||||| |||||||||||||| | ||| | || ||| ||| Sbjct 24904907 TCCTCCAGTTGTTTGCCAGCAAATATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTG 24904848 Query 39190 TCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATA 39249 || |||||| ||||| || | | || || || | ||| || || | ||||| Sbjct 24904847 TCTTGGATTTTGGCTTTGACATTCTCGATGGTGTCACTGGGCTCAACCTCGAGGGTGATG 24904788 Query 39250 CTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || |||||||| || || |||||||| ||||| Sbjct 24904787 GTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 24904753 >seq10 Length=29551940 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || ||| |||||| || || || || || | ||| || || |||| || Sbjct 4925842 ACCAAGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCGTCTTCC 4925783 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| || || || || | ||||||||| | || | || ||||| ||| | Sbjct 4925782 AGCTGCTTGCCTGCGAAGATCAGCCTCTGCTGGTCAGGAGGGAGGCCTTCTTTATCCTGG 4925723 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 || || || | || | | || || || | |||||| |||| ||||| | || Sbjct 4925722 ATCTTGGTCTTCACGTTCTCAATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTG 4925663 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCATCTTTAC 39290 |||||||| || || || ||||||||||| || || Sbjct 4925662 CCCGTCAGGGTCTTCACGAAGATTTGCATTTTGAC 4925628 >seq35 Length=16796472 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || || || |||||||| |||||||| |||||||||||||| | ||| | || ||| ||| Sbjct 12654418 TCCTCCAGTTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTG 12654359 Query 39190 TCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATA 39249 || |||||| ||||| || | | || || | | ||| || || | ||||| Sbjct 12654358 TCTTGGATTTTGGCTTTGACATTCTCGATGGTGTCATTGGGCTCAACCTCGAGGGTGATG 12654299 Query 39250 CTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || |||||||| || || |||||||| ||||| Sbjct 12654298 GTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 12654264 >seq45 Length=14289500 Score = 89.7 bits (98), Expect = 4e-13 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 39098 TTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAA 39157 |||| || || || || | || || || | || || | |||||||| |||||||| | Sbjct 10295926 TTTGGATGTTGTAGTCAGAGAGGGTCCGCCCATCCTCCAATTGTTTGCCAGCAAATATCA 10295985 Query 39158 GACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCA 39217 ||||||||||||| | ||| | || ||| ||||| |||||| ||||| || | | Sbjct 10295986 GACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCGA 10296045 Query 39218 CCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGA 39277 || || || | ||| || || | | ||| | || |||||||| || || ||||||| Sbjct 10296046 TGGTGTCACTGGGCTCAACCTCGAGGGGGATGGTCTTGCCCGTCAGGGTCTTCACAAAGA 10296105 Query 39278 TTTGCAT 39284 | ||||| Sbjct 10296106 TCTGCAT 10296112 >seq197 Length=4306960 Score = 87.8 bits (96), Expect = 2e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 39139 TGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATT 39198 |||||||| |||||||| |||||||||||||| | ||| | || ||| ||||| |||| Sbjct 2286478 TGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATT 2286419 Query 39199 TTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCC 39258 || ||||| || | | || || || | ||| || || | ||||| | || || Sbjct 2286418 TTGGCTTTGACATTCTCGATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTGCCT 2286359 Query 39259 GTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| || || |||||||| ||||| Sbjct 2286358 GTCAGGGTCTTCACAAAGATCTGCAT 2286333 >seq11 Length=28182674 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/155 (73%), Gaps = 1/155 (1%) Strand=Plus/Plus Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || || || |||||||| |||||||| |||||||||||||| | ||| | || ||| ||| Sbjct 22077968 TCCTCCAGTTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAG-GGGAATGCCCTCCTTG 22078026 Query 39190 TCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATA 39249 || |||||| ||||| || | | || || | | ||| || || | ||||| Sbjct 22078027 TCTTGGATTTTGGCTTTGACATTCTCGATGGTGTCATTGGGCTCAACCTCGAGGGTGATG 22078086 Query 39250 CTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || |||||||| || || |||||||| ||||| Sbjct 22078087 GTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 22078121 >seq26 Length=19343008 Score = 86.0 bits (94), Expect = 5e-12 Identities = 136/191 (71%), Gaps = 3/191 (2%) Strand=Plus/Minus Query 39095 CTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATA 39154 || |||| || || || || | || || || | || || || |||||||| | ||||| Sbjct 41286 CTCTTTGAATGTTGTAGTCAGAGAGGGTCCGACCATCCTCCAGTTGTTTGCCGGTAAATA 41227 Query 39155 TAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213 | |||||||||||||| |||||| | || ||||||||| |||||| ||||| || Sbjct 41226 TCAGACGCTGCTGGTCAGGTGGG-ATGCCCTCTTTGTCTTGGATTTTGGCTTTGACATTC 41168 Query 39214 GCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACA 39273 | || || || | ||| || || ||||| | || |||||||| || || ||| Sbjct 41167 TCAGTGGTGTCACTGGGCTCAAC-TCACGGGTGATGGTCTTGCCCGTCAGGGTCTTCACA 41109 Query 39274 AAGATTTGCAT 39284 ||||| ||||| Sbjct 41108 AAGATCTGCAT 41098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429508247654255