Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octodon_20degus_20[refseq_20GCF_5F000260255.1_202012-05-01] 7,135 sequences; 2,995,889,303 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq288 508 8e-139 seq187 275 9e-69 seq206 233 3e-56 seq146 122 1e-22 seq151 120 4e-22 seq6919 93.3 6e-14 >seq288 Length=2168581 Score = 508 bits (562), Expect = 8e-139 Identities = 1033/1524 (68%), Gaps = 34/1524 (2%) Strand=Plus/Plus Query 77236 CCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCC 77295 ||| || ||| ||||| | |||| || || || || || ||| |||||| |||| Sbjct 510199 CCAGTAGACTGTTTCTTATACCAAACTTTGCAATCTTCTCCTTGAGAGGTTTCCAGTCCC 510258 Query 77296 AAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATG 77355 | || |||| || | ||||| ||| | || || || || ||||| || || | Sbjct 510259 ACAGGTCTGTGGGAATAACATTCCACATGTCATACTGAAGGATTCCTTTGCTTACTGGAC 510318 Query 77356 ATCCATTATATGTTTCATAAGGTCCTT-CTGTTTCAGCTAGTTCACAACTCGCTTCCAAT 77414 | || | ||| ||||||| || || || || ||||| ||||| || ||||||| Sbjct 510319 AGCCTTCATAGATTTCATATGGGCCAAGCTCCTTG-GCTAGCTCACAGCTGGCTTCCAGG 510377 Query 77415 GCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCA 77474 ||||| |||||||| ||||| | || | ||||| | || || || ||||| ||| Sbjct 510378 GCTCCATAATAAATAGTTTCAAGGATTTATTTATTTAATAACTGGGCCTCTATACTCTCA 510437 Query 77475 AACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGT 77534 || ||||| | || ||||||| |||| | | || || |||||||| ||||| ||| Sbjct 510438 AAAGGATATCTCATCAGGATAAAGGTATCTACCAGCCCTTGTACTCCAATTCCAATGGGT 510497 Query 77535 CTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATT 77594 ||||| | ||||| || | | || ||||| | |||||| | | || || |||||| Sbjct 510498 CTATGGCATTTATTTGATAAATGTGCCTCTGGGACAGGATAGT---TTATATCGATAATT 510554 Query 77595 TTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTT 77654 ||||| | ||||| |||| |||| || || | ||| ||| || || | Sbjct 510555 TTATTCAAATTTCGGACAATAGCTTTGGTGACTTCTGCCAATTTCTCAAAGTCGTATGTG 510614 Query 77655 CCATCTA---TAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCA 77711 ||| ||||| |||| |||| || | || || | ||||||||||| |||||| Sbjct 510615 TGTTCTGGTGTAACATACATATTCAGGGCCAGGGAAGCCAAGTTACAAACTGCAACCTCA 510674 Query 77712 TTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGA 77771 || | ||| ||||| | ||| || || || || || || |||||||| || ||||| Sbjct 510675 TTTTTGCTGGTATATTCAACTATTTCTGTGCACAGGTTGCTGCATTTGATTGTTCCCAGG 510734 Query 77772 TTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTT 77831 || || ||||||||||| ||| || || || || || || || || | || || | Sbjct 510735 TTCTGCTGGTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACAGGGTACCCGGC 510794 Query 77832 TCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT-AGCTTTTATCATAGATTTGT- 77889 || |||| || || | || | | ||| | | || |||||||| | |||| Sbjct 510795 TCTGTCTGAGACTCAGTGATGGTGTACCAAA-GCTGCTGAGCTTTTACAAC---TTTGCG 510850 Query 77890 ---ATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACAT 77946 || ||| | | ||||||| ||||| | |||||||| ||||||||||| | Sbjct 510851 AACATGACCT-TGTTTTTCATAACTTTCATATAACTTCTCAAATTCCTCTCCCCAAACCT 510909 Query 77947 CATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTC 78006 |||||| ||||| || |||||||| |||| ||| |||||||| || || |||| Sbjct 510910 CATCCAGGCCAGGACACTCATTTGGACACAGCAAAGACCAGTCCTGATTAGTCTCTACTC 510969 Query 78007 GTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTT 78066 ||||||| ||||||| | ||||| || |||| || |||| | || | || |||| Sbjct 510970 GTTTCATGAAGAGATTCAGAATCCAAAGGGCAAAGAAAAGATTCCTGGCACGCTGCTCTT 511029 Query 78067 CATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTA 78126 | |||||||| |||||||| | ||| |||||||| | || || ||||||| || || | Sbjct 511030 CTTTTCCTGTGTTCTTTTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCAAGGCTCCA 511089 Query 78127 GATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGT 78186 | || || || | | ||||| | || || || || ||||| | ||| | || |||| Sbjct 511090 GGTAAATAGCAAATGCCCCAGGGCACTTGTTTCCACCTTGATCAACATAACGAGCTGTGT 511149 Query 78187 TATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATAT 78246 | ||||| ||||||| |||||| | || || ||||| | ||||| || |||| || | Sbjct 511150 TGTTATACACTCTCAGCATTGGTACAAGGCCATTAGAATTGCCATTGGTCCCAGCTATGT 511209 Query 78247 AACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATA 78306 | || ||| | || | |||| ||| | | | || |||||||| || ||||| | Sbjct 511210 AGCTGCCAGTAGCCCAAATACAACTCACAGTGACACCAATTCCTCCAGCGGATTTAGAAA 511269 Query 78307 TTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAA 78366 | | || || | |||| || || || || || || | |||||||| |||| | | Sbjct 511270 TCAATGCACACTGCTTCAGAGTGTCATAAATGCCTTCGGTGCTGTCATCTTTCATACTCA 511329 Query 78367 GAAGAAAACAGCTAGACATTTGATGATGAACAGTT----CCTGCATTAAATAATGTCGGA 78422 |||| |||||||| || | ||| || ||||| | ||||| || | | ||| Sbjct 511330 GAAGGAAACAGCTTGAAAGTTG----TGGGCAGTTGGTACTAGCATTGAAGAGAGAGGGA 511385 Query 78423 GATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATG 78482 || ||||| |||||||| || | ||||| || |||||||||||||| || | |||||| Sbjct 511386 GAAGCATGAGTAAACCACTTCTGGGAAAGAAGGTTGTATGTTTCAATTGCAGCCTCTATG 511445 Query 78483 TCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTC 78542 || || ||||| || || | || | ||||||||||||||| || |||||| || Sbjct 511446 TCTTCTTTGTGAATCCCCACAGACACCCTCATCAACATATGCTGCGGCCTTTCAGCCACT 511505 Query 78543 TTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 78602 || ||| || |||||||| || || | |||| ||| ||||| ||||| || || || Sbjct 511506 TTTCCATTGATCTTCAACAAATAGGACCTCTCCAGAGTCTTAAAGCCAAAGTAATTATAA 511565 Query 78603 GAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATA 78662 || || |||| || || || || ||||||| || |||||| | ||||||| Sbjct 511566 GAGAAATCTCAGTCATAGATGATGGCAGAATTCAGGCGATCTTTATGGGCCAAAACAATA 511625 Query 78663 TCCA----TGACAGTAGTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATA 78718 |||| |||| | | | || ||||| || ||||| | ||||| | ||| Sbjct 511626 TCCAGTGTTGAC----TTGGCCACCATGGGAGAATGTTTGCCATTATGTGGATTTATATA 511681 Query 78719 GTTAAATAAATCTTCCATTACATC 78742 ||| || | || ||||||||||| Sbjct 511682 GTTGAAGAGGTCCTCCATTACATC 511705 Score = 170 bits (188), Expect = 3e-37 Identities = 299/430 (70%), Gaps = 9/430 (2%) Strand=Plus/Plus Query 76806 GGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGC 76865 ||| |||| | || ||| ||||| ||||| || | | |||| |||| | ||||| || Sbjct 508938 GGTCTTGTCCTTAAATAATACATCCCAGTCTTCAAATCCAGCTTCCAAGCATAGAAGTGT 508997 Query 76866 ATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGA 76925 | || || || ||| || | || || || || || || |||| |||| || ||| Sbjct 508998 GTACTGGTGAGCTTGTG-TAGTTGGGCTCAGCAATGTGGATGTTCAAAAACTGGCTCTGA 509056 Query 76926 TCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAA 76985 || |||||||| || | |||||| ||||| || | | || || |||| |||||||| Sbjct 509057 TCAATGAAAGCACCACGATCAGCAGCCATCTTCAGGACAGTTTTCTGAGAGATTTCCCAT 509116 Query 76986 ATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGGTTTG---TAT--TTTGAATGGAAC 77040 | || || ||| || || | ||||| |||| ||| ||| | || || || | Sbjct 509117 ACTGTCTTATAAAGCTGGTTCAGGTCATCGGGAA--TTTCCACTATGCTCTGGATAGAGC 509174 Query 77041 CACCATCTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAA 77100 || | ||||| ||| || || || |||||||| || || ||| || | | Sbjct 509175 CATTGCAGGCAATAATCTGATTTTTCATTTCTTCATTCCATAAGCCCCGCTCGGTAAGAT 509234 Query 77101 CTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAA 77160 || | | || |||||||| || || ||||||||||| || || ||||| ||||||| | Sbjct 509235 CTTTCAATAG-TGAGGATTTACAATCTGAAATTCTCCTGATAAGACTCTTAGAGTGTAGA 509293 Query 77161 TATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAG 77220 | || |||||||| ||||| | ||| ||||| |||| ||| || |||||||| ||||||| Sbjct 509294 TGTTGCTGGTATAAGGTTCAATAGACTCATTTTTTCTCAAGATCTGAGCAGTTGAAGCAG 509353 Query 77221 TTGGCATAGG 77230 | | ||| || Sbjct 509354 TAGTCATGGG 509363 >seq187 Length=5094135 Score = 275 bits (304), Expect = 9e-69 Identities = 615/920 (67%), Gaps = 30/920 (3%) Strand=Plus/Plus Query 47790 GTTC-TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCC 47845 |||| ||||||||||| |||| ||| |||| ||| || || ||||||||||| Sbjct 4777 GTTCATTTAAAAGTCAGCATCCCAAGTAAAAGAATTCTCCATAGGAATGGACATAACTCC 4836 Query 47846 CATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATAT 47905 ||| | ||||| ||||| || ||||| || || || || || |||||||| || || Sbjct 4837 CATAGTCTGATACTCACCAACTATCTTCTCAAAGAAGTTTGTCTTCCCTTCCAAAGAAAT 4896 Query 47906 ATTT-TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTG 47964 |||| || || || ||||||||||| | | ||| || | || |||| ||| Sbjct 4897 ATTTCTCTATGAAGTCAAATGGATTTTCCACTCGGAAAACCTTGCTGAAGCCTAGTTCCA 4956 Query 47965 AAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTA 48024 || || || || || || || | || | |||||||| | | ||||| || | Sbjct 4957 GCATGAGCCTGTCAGCCACAAACTTGATGCACTGTTTCATCAAATTGGAGTTCATCCCGA 5016 Query 48025 TAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTA 48084 || | || || || | ||||||| || ||||| || || || || || | | | Sbjct 5017 TAGGCTTCACCGGCAAGCCCTCCGTGAGGAACTCCTGCTCAATGCCGATGGCGTTGATGA 5076 Query 48085 TTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATG 48144 ||| | ||| | | ||| || | || || || || ||||| | || Sbjct 5077 CAATCTCCCTCACCCTCTGCTCCAACGGCTTGTGCACCAGGTGCTTGAACATCAGGCACA 5136 Query 48145 CAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGG 48204 | || |||||| | | || || | ||| ||||| | |||||| ||||| ||||| || | Sbjct 5137 CGAAGTCACAACGCAAGCCCTCGTATCTGCTAATGAGTTCGTTGGAAAAGGTGAGGCCAG 5196 Query 48205 GCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGC 48264 |||| || || ||||| |||||||| || || ||| ||||| ||||||||||| || | Sbjct 5197 GCATGAGGCCCCGTTTCTTGAGCCAGAAGATCAACGCAAAAGAACCAGAAAAGAAAATTC 5256 Query 48265 CTTCTACGGCCGCAAATGCG---GTAAGTCTCTCTCCGTAACTGGCTTCGTTGTG---TA 48318 |||| || | |||| || || || ||||| || |||| || |||| || Sbjct 5257 CTTCCACAGTGACAAAGGCCACCGTGTGT---TCTCCATATGTGGCCTCTTTGTCCCCTA 5313 Query 48319 TCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAA 48378 |||| || ||||| || ||||||||||| ||||| | || || || | ||||| | Sbjct 5314 TCCAGCGCAACGCCCAGTCTGCCTTCTTCTTCACACAGGCCACGGTCTCAGTGGCATTGA 5373 Query 48379 AGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTT 48438 ||||||| | |||| | | |||| ||| |||||| || || | || | ||||||| Sbjct 5374 AGAGAAACTCCCTTTCTTGGGAATCTCTAATGTAAGTGTCCATAAGGAGTGTGTACATTT 5433 Query 48439 CGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCT 48498 | || || | ||||| || || ||||| || ||||| ||||| | |||||||| || | Sbjct 5434 CCGAATGCAGGTTTTCCATGGCAATCTGGAAGCCGTAGAAACACCGGGCTTCTGTAATTT 5493 Query 48499 GTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAA 48558 | || || |||||| || ||| ||||||| | ||||| ||||| || |||| || Sbjct 5494 GAACTTCTTGGTTAAATCGCTCCACCAGATTCTCACTGACTATGCCATCGCTGGCAGGAA 5553 Query 48559 AAA-----ATGCTAATACA-----------TGTTTAATAAAATATTTTTCGTTGGAAGTC 48602 ||| || ||||| | ||| ||||| ||| | || | | || Sbjct 5554 AAAAAAATATAATAATAAAAAGTTAGAATGTGTGATATAAAGTATCTCTCTTCAGCCTTC 5613 Query 48603 AGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGAT 48662 || | ||||| | || ||||| || | ||| ||||| || ||||||||||| || Sbjct 5614 AGGGCTTCCCAGTGCTGAATGTCTTTGGAAAGATCGACTTCCTCCGCTGTCCAAAAAGAA 5673 Query 48663 GCCTCTGCTTTTTTATACAT 48682 ||||| ||||| ||| |||| Sbjct 5674 GCCTCGGCTTTCTTACACAT 5693 >seq206 Length=4534510 Score = 233 bits (258), Expect = 3e-56 Identities = 1109/1731 (64%), Gaps = 76/1731 (4%) Strand=Plus/Plus Query 76787 CTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAG 76846 ||| || ||| || ||| | | |||| | || ||| | ||| || || || | | || Sbjct 2975212 CTGGATAGGATGAGCTGCAGTTCTTGTCCTTAAATAATGCATCCC-GTCTTCAAATCCTC 2975270 Query 76847 ACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAAT 76906 |||| || ||||| ||||| || || || | | |||| | || || || || || || Sbjct 2975271 CTTCCAACCATAGAAGTGCATACTGGTGAGCTCGCTATAATTGGGCTCAGCCATGTGGAT 2975330 Query 76907 ATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGT 76966 |||| ||||| | ||||| | ||||| || ||||| ||||| || | | || Sbjct 2975331 GTTCAAAGACTGGATCTGATCAACCAAAGCACCATGATCAGAAGCCATCTTGAGGACAGT 2975390 Query 76967 CTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGGTT-TG 77025 || |||| |||||||| | || ||| || || | ||||| |||| | | Sbjct 2975391 TTTCTGAGAGATTTCCCATCCGATCTTATAAAGCTGCTTCAGGTCATCAGGAATTTCCTC 2975450 Query 77026 TAT--TTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTCCACAA 77083 ||| | || || || ||| | ||||| ||| || || | | |||||| || Sbjct 2975451 TATGCTCTGGATAGAGCCATTGCAGGCAATAATCTGATTTTTCATTCCTTTATTCCATAA 2975510 Query 77084 TTTCCTCTCTGTTAAAACTCT-AAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACA 77142 | ||| | | | || | || ||| ||||||| || || | ||||||| | |||| Sbjct 2975511 GCCCTGCTCCATAAGATCTTTCAATAAGA-GAGGATTTACAATCTTAAATTCTTCTGACA 2975569 Query 77143 ATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAA 77202 | ||| | | |||||| || || |||||||| |||| | ||| | ||| || ||||| | Sbjct 2975570 AGACTTTTCAAGTGTAGATGTTGCTGGTATAAAGTTCAATAGACTTATTATTCCCCAAGA 2975629 Query 77203 TTTGAGCAGTAGAAGCAGTTGGCA-TAGGTGCCACCAATAAACTATTTCTGAGACCATG- 77260 | |||||||| |||||| | || | |||| || | | || |||| || | | || Sbjct 2975630 TCTGAGCAGTTGAAGCACTAGGAAGTAGG-GCAATAAGTAGACTACTTTTTCATCTTTGC 2975688 Query 77261 --TGTTCTGAT----------TT---TAT----CTTTTAGATATTTCC-------AATCC 77294 | ||||||| || ||| ||| || | | | ||| | Sbjct 2975689 AATCTTCTGATCAAGAGGTATTTAAGTATACCCCTTGCAGTCACTGCAGACCTAGAATTC 2975748 Query 77295 CAAAGATC----TGAAG---GTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACT 77347 || | ||| ||||| | ||||| ||| | ||| || || || ||||| || || Sbjct 2975749 CACATATCATCCTGAAGTATGAGTAACATTCCACATATCATACTGAAGGATTCCTTTGCT 2975808 Query 77348 -AGCATATGATCCATTATATGTTTCATAAGGTCCTT-CTGTTTCAGCTAGTTCACAACTC 77405 | || | || || | ||| |||||||| || || | || || ||||| ||||| || Sbjct 2975809 TACCAGA-GAGCCTTCATAGGTTTCATATGGGCCATGCTCCTTG-GCTAGATCACAGCTG 2975866 Query 77406 GCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCA 77465 |||||||| ||||| ||||||| || | | || | ||||| | || | || Sbjct 2975867 GCTTCCAAGGCTCCATAATAAACAGTCACAATGATTTGGTTATTTCAAAACTGGGACTCT 2975926 Query 77466 ATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATA 77525 ||| ||||| | || | || ||||| ||||||| | | || ||||||| Sbjct 2975927 GGACTCTCAAAATGTTATCTCATCAGGATAAAAGCATCTGTGAGCCGTTGTACTCCAACT 2975986 Query 77526 CCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATG 77585 |||| || ||| ||||| || | | || |||| | ||| || || || ||| Sbjct 2975987 TCAATGGGGAAATGATGTTTATTTGATAAGTGTGCCTCTGAGACAGGGTAGTATTTTATG 2976046 Query 77586 TCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAA 77645 || ||||||||||| |||||| |||| ||| || || | | ||| | | Sbjct 2976047 TCAATAATTTTATTCAGATTTTGGACAATATCTTCCGTGACTTCTGTCAATTTCTCATAG 2976106 Query 77646 TCAAATCT-TCCATCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGC 77704 ||| || | | | | ||||| |||| |||| || | || || | |||||||||| Sbjct 2976107 TCATATGTGTTCTGATGTAACATACATATTCAGGGCCAGGGAAGCCAAGATACAAACTGC 2976166 Query 77705 TACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGT 77764 ||||||| | ||| |||| || || || || || || || |||||||| || Sbjct 2976167 AACCTCATCTTTGCTGGTCTATTCTACCATTTCTGTGTGCAGGTTGCTGCATTTGATTGT 2976226 Query 77765 GCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGT 77824 ||||| || | ||||||||||| || | || | ||| || || || || || || Sbjct 2976227 TCCCAGGTTCTTCTGGTTGCTCTTCCAGTTATAAGAATGCTTGTAGAGCATGAATGGGGT 2976286 Query 77825 CCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTT--TTATCATA 77882 || || | |||| || || || || || || || | | ||| || ||| | Sbjct 2976287 ACCCGTCTG--TCTGAGACTCAATGAT-GA----CATACCAATGCTGCTGAATTTTCACA 2976339 Query 77883 GATTT--GTAT-CGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCC 77939 ||| | | || | | | ||||||| ||||| |||||||| |||||| Sbjct 2976340 ACTTTACGAACACGACCTTGTTTTTCATAACTCTCATATAAGGTATCAAATTCCTCTCCC 2976399 Query 77940 CAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCA-TCTTC 77998 ||||| || |||| ||||| || ||||| | |||||||| || ||||| | | || Sbjct 2976400 CAAACCTCGTCCAGACCAGGACACCCATTTTG-CACATCAAAGATCAGTCCTGAATAGTC 2976458 Query 77999 CTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCT 78058 | | || |||||| |||||||| | ||||| | |||| || ||||| | | Sbjct 2976459 TCTGA-TCATTTCATGAAGAGATCCAGAATCCAAGGTGCAAAGAAAAGATCCCTAGCATG 2976517 Query 78059 ATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCA 78118 |||||| | ||||||||||||||| | ||| |||||||| | || || ||||| Sbjct 2976518 CTGTTCTCCCTTTCCTGTATTCTTT---AAATCAAGAAACTCAAGCATTTCTAAATGCTG 2976574 Query 78119 TGGTTCTAGATATATTGC-CATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATC 78177 | || | | || | || || ||| | | ||||| || | |||| | ||| | Sbjct 2976575 AGCCTCCAAGGAAATAACAAATGAC-CCAAGGCACTTATTTCCACTTTGATGAACATAAC 2976633 Query 78178 TGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTC 78237 | | ||||| ||||| ||||||| |||||| |||| ||| ||| || ||||||| || | Sbjct 2976634 TATCTGTGTTGTTATACACTCTCAGCATTGGTATAAGACCATTA-ATATTCCATTGGTCC 2976692 Query 78238 CAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCA 78297 || || | || || | || |||| | ||| | | | || ||||| || || Sbjct 2976693 AAGCTATGCAGCTATCAGTAGCCTGAATGTAACTCACAGCAACACCAATTCCACCAGCAG 2976752 Query 78298 TCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCA 78357 ||||| || | || | | |||| || | ||| || || | || |||||||| Sbjct 2976753 ATTTAGAAATCAATGCATACTGCTTCAGAGTGTAGTAAATGCCTTTGATGCTGTCATCTT 2976812 Query 78358 TCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTT----CCTGCATTAAAT 78413 |||| | ||||||||| |||| || ||||| || ||||| | | ||| || Sbjct 2976813 TCATAATCAGAAGAAAAAAGCTTGAAATTTG----TGGGCAGTTGGTATCAGAATTGAAG 2976868 Query 78414 AATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTT 78464 | || ||||| ||||| ||||| || || | | |||| | ||| ||||| Sbjct 2976869 AGAGTGGGAGAAGCATGAGTAAAGCACTTATTAAAAAGAAAGTTGCATGTT 2976919 >seq146 Length=7541600 Score = 122 bits (134), Expect = 1e-22 Identities = 106/132 (80%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 ||||||||||| ||||| ||||| |||||||| || || |||||||| ||||| | ||| Sbjct 3726375 TGAAATTCTCCTGACAAGACTCTTCGAGTGTAGATGTTGCTGGTATAAGGTTCAATAGAC 3726316 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 || || |||||||| || |||||||| |||||||| ||||| || || | | || ||| Sbjct 3726315 TCGTTATTTCCCAAGATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAGACTG 3726256 Query 77247 TTTCTGAGACCA 77258 ||||| | |||| Sbjct 3726255 TTTCTTATACCA 3726244 Score = 105 bits (116), Expect = 9e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458 || || ||||| || | || ||||| ||||| |||||||| || || ||||| || ||| Sbjct 3706552 GTGCCAGCATTGAAGAGAGTGGGAGAAGCATGAGTAAACCACTTCTCGGAAAGAAGGTTG 3706493 Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518 ||||||||||| || | |||||||| || ||||| || || | || | ||||||| Sbjct 3706492 TATGTTTCAATTGCAGCCTCTATGTCTTCTTTGTGAATCCCCACAGACACCCTCATCAAC 3706433 Query 78519 ATATGCTGAGGTCTTTCAACC 78539 |||||||| || |||||| || Sbjct 3706432 ATATGCTGCGGCCTTTCAGCC 3706412 Score = 104 bits (114), Expect = 3e-17 Identities = 150/209 (72%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 77363 ATATGTTTCATAAGGTCCTT-CTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGT 77421 ||| |||||||| || || | || || ||||| ||||| || ||||||| ||||| | Sbjct 3721958 ATAGGTTTCATATGGGCCATGCTCCTTG-GCTAGCTCACAGCTGGCTTCCAGGGCTCCAT 3721900 Query 77422 AATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGAT 77481 ||||||| ||||| || || | ||||| | || || || ||| ||||| |||| Sbjct 3721899 AATAAATAGTTTCAAAGATTTGTTTATTTAATAACTGGGCCTCTGGACTCTCAAAAGGAT 3721840 Query 77482 AATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTC 77541 | | || |||||||||||||| | || || |||||||| ||||| |||||||| | Sbjct 3721839 ATCTCATCAGGATAAAGGCATCTGCCAGCCCTTGTACTCCAATTCCAATGGGTCTATGGC 3721780 Query 77542 TCTTATTGGAAATTTTAGCTTCTGGAATA 77570 ||||| || | | || | ||||||| Sbjct 3721779 GTTTATTTGATAAATGTGCCTTTGGAATA 3721751 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062 ||||||||||| |||||||| || ||||| || |||| || ||||||| || | || Sbjct 3714759 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGATCTCTGGCACGCTGC 3714700 Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122 ||||| |||||||| ||||| || | ||| |||||||| | || || ||||||| || Sbjct 3714699 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCAAGGC 3714640 Query 78123 TCTAGATATATTGC 78136 || || || || || Sbjct 3714639 TCCAGGTAAATAGC 3714626 >seq151 Length=7174217 Score = 120 bits (132), Expect = 4e-22 Identities = 98/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 || ||||| ||||| | |||||| ||||| ||||| || ||||| ||||| ||||| ||| Sbjct 1182554 TCGTCTCTGCTAATGAGTTCGTTGGAAAAGGTGAGGCCAGGCATGAGTCCTCGTTTCTTG 1182495 Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283 ||||| || |||| ||| ||||| ||||||||||| |||||||| || || ||||| || Sbjct 1182494 AGCCAGAAGATTGACGCAAAAGAACCAGAAAAGAAGATGCCTTCCACAGCGGCAAAGGC 1182436 >seq6919 Length=1122 Score = 93.3 bits (102), Expect = 6e-14 Identities = 108/144 (75%), Gaps = 4/144 (3%) Strand=Plus/Minus Query 47790 GTTC-TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCC 47845 |||| |||| |||||| |||| |||| |||| ||| ||| | ||||||||||| Sbjct 630 GTTCATTTAGAAGTCAGCATCCAAAGTAAAAGAATTCTCTGTGGGGCTGGACATAACTCC 571 Query 47846 CATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATAT 47905 ||| | ||||| || ||||| | ||||| || || || || || ||||||| || || Sbjct 570 CATCCTCTGATACTCGCCCACTCTCTTCTCAAAGAAGTTTGTCTTCCCTTCCAGAGAAAT 511 Query 47906 ATTTTCCATAAAATCAAATGGATT 47929 ||| ||||| || ||||||||||| Sbjct 510 ATTCTCCATGAAGTCAAATGGATT 487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694606844226400