Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctolagus_20cuniculus_20[refseq_20GCF_5F000003625.3_202009-10-20] 3,241 sequences; 2,737,462,810 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq12 86.0 1e-11 >seq12 Length=155355395 Score = 86.0 bits (94), Expect = 1e-11 Identities = 101/133 (76%), Gaps = 4/133 (3%) Strand=Plus/Minus Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116 ||||||||||| || || | ||||| || |||||||| || |||||| | || ||||| Sbjct 66862202 GCATTTTTTGGCGCCCAAATGAATTCCTTCATCCATGTGATAATGTACTCCTACTATGGG 66862143 Query 52117 ATGGCCGCTTGTGGTCCTATG--TTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTA 52174 | | || | ||| || ||| ||||| |||||||| ||||||||||| || || || | Sbjct 66862142 CTAACTGCATTTGG-CCCATGGATTCAG-AAGTATCTTTGGTGGAAACGATACCTGACCA 66862085 Query 52175 TAATGCAGTTGGT 52187 | ||||| |||| Sbjct 66862084 TGTTGCAGCTGGT 66862072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923159398989640