Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctolagus_20cuniculus_20[refseq_20GCF_5F000003625.3_202009-10-20] 3,241 sequences; 2,737,462,810 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq7 84.2 2e-11 >seq7 Length=173684459 Score = 84.2 bits (92), Expect = 2e-11 Identities = 149/216 (69%), Gaps = 1/216 (0%) Strand=Plus/Plus Query 14961 TCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGC 15020 ||| || || | ||||| ||||| || ||||| |||||||| || | | | | | Sbjct 2561104 TCTCAACACAAGGTGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGATAAAGTCCATCC 2561163 Query 15021 GTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTT 15080 ||||| | ||| |||||||| | |||| | || || || |||||||||||||| Sbjct 2561164 ATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 2561223 Query 15081 GTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAAT 15140 || |||||| ||||||| ||||||| ||||| ||| || || | || || Sbjct 2561224 ATCCTGGATTTTGGCTTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGCGTGAT 2561283 Query 15141 GGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||| || || || || ||||| || || || ||||| Sbjct 2561284 GGTCTT-CCCGTAAGGGTTTTCACGAAGATCTGCAT 2561318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357377883127685