Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctolagus_20cuniculus_20[refseq_20GCF_5F000003625.3_202009-10-20] 3,241 sequences; 2,737,462,810 total letters Query= NC_019559.1 Length=202946 Score E Sequences producing significant alignments: (Bits) Value seq14 113 6e-20 >seq14 Length=163896628 Score = 113 bits (124), Expect = 6e-20 Identities = 176/252 (70%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 153759 ATGCTCGTTGAAAACTACACAAGAACCTTTAATTGTAACGTGGCAAAAGAAGAAAGCTGT 153818 |||||| || || || | || ||| ||| |||| || ||||| || ||||| ||||| Sbjct 106903950 ATGCTCTCTGCAATCTTCCCAGGAAGTCTTAGTTGTGACATGGCAGAAAAAGAAGGCTGT 106903891 Query 153819 AGGTCCAGAAAATATGGCCACGTATAGCAAAGCCCACGGTGTAGTGCTTCAGCCCACATA 153878 | ||||||||||||| ||| | ||||| ||| || || ||| | ||||| | || Sbjct 106903890 GAGCCCAGAAAATATGGTCACCTTCAGCAAGAACCATGGGGTGGTGGTGCAGCCTGCCTA 106903831 Query 153879 TAAAGATAGAATTAATATAACCGAATTAGGTCTTTTAAACAGTAGTATAACGTTTTGGAA 153938 || || | | || || ||| | | || || ||| | || || || ||||| Sbjct 106903830 CAAGGACAAGTTAAACATCACCCAGCTGGGACTCCAGAACTCCACCATCACCTTCTGGAA 106903771 Query 153939 TGCAACACTGGATGATGAAGGCTGTTATATGTGTCTGTTTAATATGTTCGGTTCTGGTAA 153998 | | || ||||| ||||| || |||||||||||||| ||||| | || || ||||| || Sbjct 106903770 TACGACCCTGGAGGATGAGGGGTGTTATATGTGTCTCTTTAACACCTTTGGGTCTGGGAA 106903711 Query 153999 GGTATCGGGAAC 154010 | | || ||||| Sbjct 106903710 GATCTCAGGAAC 106903699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 649272895266160