Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctolagus_20cuniculus_20[refseq_20GCF_5F000003625.3_202009-10-20] 3,241 sequences; 2,737,462,810 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq12 188 9e-42 seq71 185 1e-40 seq392 167 3e-35 seq13 167 3e-35 seq213 113 6e-19 seq1 104 3e-16 seq8 102 1e-15 seq4 98.7 1e-14 seq3 96.9 4e-14 >seq12 Length=155355395 Score = 188 bits (208), Expect = 9e-42 Identities = 163/202 (81%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| |||||||||||||||| || Sbjct 10794507 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGCGACGTGA 10794566 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 10794567 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 10794626 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 10794627 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 10794686 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 10794687 GCACCTGCTTGAGCACCTTGTA 10794708 Score = 188 bits (208), Expect = 9e-42 Identities = 163/202 (81%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| |||||||||||||||| || Sbjct 10839783 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGCGACGTGA 10839724 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 10839723 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 10839664 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 10839663 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 10839604 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 10839603 GCACCTGCTTGAGCACCTTGTA 10839582 Score = 185 bits (204), Expect = 1e-40 Identities = 162/202 (80%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| |||||||||||||||| || Sbjct 10895254 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGCGACGTGA 10895313 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 10895314 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 10895373 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| ||||| ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 10895374 TGTCATTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCAGTGTCGGGGT 10895433 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 10895434 GCACCTGCTTGAGCACCTTGTA 10895455 Score = 179 bits (198), Expect = 5e-39 Identities = 161/202 (80%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | |||||||||||| |||||||||||||||| || Sbjct 10849142 GCTTGGCCAGCTCACCAGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGCGACGTGA 10849201 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 10849202 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 10849261 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 10849262 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 10849321 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 10849322 GCACCTGCTTGAGCACCTTGTA 10849343 Score = 179 bits (198), Expect = 5e-39 Identities = 161/202 (80%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | |||||||||||| |||||||||||||||| || Sbjct 10914010 GCTTGGCCAGCTCACCAGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGCGACGTGA 10914069 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 10914070 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 10914129 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 10914130 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 10914189 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 10914190 GCACCTGCTTGAGCACCTTGTA 10914211 Score = 176 bits (194), Expect = 6e-38 Identities = 156/195 (80%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 1254350 CAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTT 1254409 ||| ||||| ||| | |||||||||||| |||||||||||||||| ||| ||| Sbjct 10867953 CAGCTCGCCAGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGCGACGTGATGGTGGA 10867894 Query 1254410 GCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTT 1254469 ||||||||| |||||||||| || ||||||| | ||||||| |||| |||||||| Sbjct 10867893 GCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGATGTCGTT 10867834 Query 1254470 GACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTG 1254529 ||| ||||||||||||| ||| | |||| |||||||| ||||||||||||||| Sbjct 10867833 GACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACCTG 10867774 Query 1254530 CTTGAGCACCTTGTA 1254544 ||||||||||||||| Sbjct 10867773 CTTGAGCACCTTGTA 10867759 Score = 176 bits (194), Expect = 6e-38 Identities = 160/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | ||||||||| || |||||||||||||||| || Sbjct 10944980 GCTTGGCCAGCTCGCCGGGCAGTAGCAGGCGCACAGCCGTCTGGATCTCGCGCGACGTGA 10944921 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || ||||||| | ||||||| || | | Sbjct 10944920 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCAAAGA 10944861 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 10944860 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 10944801 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 10944800 GCACCTGCTTGAGCACCTTGTA 10944779 Score = 176 bits (194), Expect = 6e-38 Identities = 160/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | |||||||||||| |||||||||||||||| || Sbjct 11013430 GCTTGGCCAGCTCACCAGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGCGACGTGA 11013371 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 11013370 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 11013311 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 11013310 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 11013251 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 11013250 GCACCTGCTTGAGCACCTTGTA 11013229 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| ||||| ||| | ||||||||| || |||||||||||||||| || Sbjct 10804522 GCTTGGCCAGCTCGCCAGGCAGCAGCAGGCGCACAGCCGTCTGGATCTCGCGCGACGTGA 10804581 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 10804582 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 10804641 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| |||||| | Sbjct 10804642 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGAT 10804701 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 10804702 GCACCTGCTTGAGCACCTTGTA 10804723 Score = 159 bits (176), Expect = 4e-33 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| |||||||||||||||| || Sbjct 11283449 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGCGACGTGA 11283390 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || | ||||||| |||||||||| || |||||| ||||| || | | Sbjct 11283389 TGGTTGAGTGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCAGAAATGCGTTCAAAAA 11283330 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||| |||| ||||||||||||| ||| | |||| ||| ||||| |||||||| Sbjct 11283329 TGTCGCTGACGAACGAGTTCATGATGCTCATGGCCTTGGAGGATATGCCGGTGTCGGGGT 11283270 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||||||||||||||||||| Sbjct 11283269 GCACCTGCTTGAGCACCTTGTAGATG 11283244 >seq71 Length=2041368 Score = 185 bits (204), Expect = 1e-40 Identities = 162/202 (80%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| |||||||||||||||| || Sbjct 658246 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGCGACGTGA 658305 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 658306 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 658365 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||| || |||||||| Sbjct 658366 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGAGGAGATCCCGGTGTCGGGGT 658425 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 658426 GCACCTGCTTGAGCACCTTGTA 658447 Score = 185 bits (204), Expect = 1e-40 Identities = 162/202 (80%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| ||||| ||| | |||||||||||| |||||||||||||||| || Sbjct 712004 GCTTGGCCAGCTCGCCAGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGCGACGTGA 711945 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 711944 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 711885 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 711884 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 711825 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 711824 GCACCTGCTTGAGCACCTTGTA 711803 Score = 179 bits (198), Expect = 5e-39 Identities = 161/202 (80%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | ||| |||||||| |||||||||||||||| || Sbjct 375880 GCTTGGCCAGCTCGCCGGGCAGCAGCAGACGCACGGCCGTCTGGATCTCGCGCGACGTGA 375939 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || |||||| | ||||||| |||| | Sbjct 375940 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGA 375999 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 376000 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 376059 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 376060 GCACCTGCTTGAGCACCTTGTA 376081 Score = 179 bits (198), Expect = 5e-39 Identities = 161/202 (80%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| |||||||||||||||| || Sbjct 385961 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGCGACGTGA 386020 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| | ||||||| |||| | Sbjct 386021 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGA 386080 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 386081 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 386140 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 386141 GCACCTGCTTGAGCACCTTGTA 386162 Score = 179 bits (198), Expect = 5e-39 Identities = 161/202 (80%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| |||||||||||||||| || Sbjct 691403 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGCGACGTGA 691462 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| | ||||||| |||| | Sbjct 691463 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGA 691522 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 691523 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 691582 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 691583 GCACCTGCTTGAGCACCTTGTA 691604 >seq392 Length=196526 Score = 167 bits (184), Expect = 3e-35 Identities = 158/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | ||| |||||||| ||||| | |||||||| || Sbjct 31399 GCTTGGCCAGCTCGCCGGGCAGCAGCAGACGCACGGCCGTCTGCACCTCGCGCGACGTGA 31340 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| | ||||||| |||| | Sbjct 31339 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGA 31280 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 31279 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 31220 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||||||| Sbjct 31219 GCACCTGCTTGAGCACCTTGTA 31198 Score = 154 bits (170), Expect = 2e-31 Identities = 158/204 (77%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | ||| |||||||| ||||| | |||||||| || Sbjct 35263 GCTTGGCCAGCTCGCCGGGCAGCAGCAGACGCACGGCCGTCTGCACCTCGCGCGACGTGA 35322 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| | ||||||| |||| | Sbjct 35323 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGA 35382 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTT-GTTGGAGATGCCCACGTCGGGG 1254521 |||||||||| ||||||||||||| ||| | ||| | |||||||| ||||||| Sbjct 35383 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGGACGAGATGCCGGTGTCGGGG 35442 Query 1254522 TGCACCT-GCTTGAGCACCTTGTA 1254544 ||||||| |||||||||||||||| Sbjct 35443 TGCACCTGGCTTGAGCACCTTGTA 35466 >seq13 Length=143360832 Score = 167 bits (184), Expect = 3e-35 Identities = 158/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| ||||||||||| || | || Sbjct 42190163 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 42190104 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| | ||||||| |||| | Sbjct 42190103 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGA 42190044 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 42190043 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 42189984 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 ||||||||||||| |||||||| Sbjct 42189983 GCACCTGCTTGAGTACCTTGTA 42189962 Score = 161 bits (178), Expect = 1e-33 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | ||||||||| || ||||||||||| || | || Sbjct 42144871 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACAGCCGTCTGGATCTCCCGGGACGTGA 42144812 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| | ||||||| |||| | Sbjct 42144811 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGA 42144752 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| |||||||| |||||||| Sbjct 42144751 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 42144692 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||| ||||||||||||||||| Sbjct 42144691 GCACTTGCTTGAGCACCTTGTA 42144670 >seq213 Length=484298 Score = 113 bits (124), Expect = 6e-19 Identities = 104/132 (79%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 || || |||||| | || || || || |||||| | |||||||| | |||| || ||| Sbjct 277718 ACACTTTTTGAGCTTATTCTGGCTGCAAACTACTTAGACATCAAAGGTTTGCTGGACCTT 277777 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 ||||||| |||| ||||| ||||||||||| ||| | || |||||||| ||||||||| Sbjct 277778 ACGTGCAAGACTGTTGCCAATATGATCAAGGGGAAGACTCCTGAGGAGATTCGCAAGACC 277837 Query 1592285 TTTAACATCAAG 1592296 || ||||| ||| Sbjct 277838 TTCAACATTAAG 277849 >seq1 Length=194850757 Score = 104 bits (114), Expect = 3e-16 Identities = 102/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 || || |||||| | || || || || |||||| |||||||| | |||| || || Sbjct 142870396 ACACTTTTTGAGCTTATTCTGGCTGCAAACTACTCAGACATCAAAGGTTTGCTGGACGTT 142870337 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 ||||||| |||| ||||| ||||||||||| ||| | || |||||||| ||||||||| Sbjct 142870336 ATGTGCAAGACTGTTGCCAATATGATCAAGGGGAAGACTCCTGAGGAGATTCGCAAGACC 142870277 Query 1592285 TTTAACATCAAG 1592296 || ||||| ||| Sbjct 142870276 TTCAACATTAAG 142870265 >seq8 Length=111795807 Score = 102 bits (112), Expect = 1e-15 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 1592171 TTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGC 1592230 |||||| | || || || || |||||| | |||||||| | |||| ||| || ||| Sbjct 69358839 TTTGAGCTTATTCTGGCTGCAAACTACTTAGACATCAAAGGTTTGCTGGATGTTACATGC 69358898 Query 1592231 AAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAAC 1592290 ||| |||| ||||| ||||||||||| ||| | || |||||||| | ||||||||| ||| Sbjct 69358899 AAGACTGTTGCCAATATGATCAAGGGGAAGACTCCTGAGGAGATTCACAAGACCTTCAAC 69358958 Query 1592291 ATCAAG 1592296 || ||| Sbjct 69358959 ATTAAG 69358964 >seq4 Length=91394100 Score = 98.7 bits (108), Expect = 1e-14 Identities = 101/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 || || |||||| | || || || || |||||| | |||||||| | |||| || || Sbjct 34822544 ACACTTTTTGAGCTTATTCTGGCTGCAAACTACTTAGACATCAAAGATTTGCTGGACATT 34822603 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 |||||| |||| | ||| ||||||||||| ||| | || |||||||| ||||||||| Sbjct 34822604 ACATGCAAGACTGTTGTCAATATGATCAAGGGGAAGACTCCTGAGGAGATTCGCAAGACC 34822663 Query 1592285 TTTAACATCAAG 1592296 || ||||| ||| Sbjct 34822664 TTCAACATTAAG 34822675 >seq3 Length=155691105 Score = 96.9 bits (106), Expect = 4e-14 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || |||||| | |||||||| | |||| || || ||||||| |||| ||||| Sbjct 16979789 GCTGCAAACTACTTAGACATCAAAGGTTTGCTGGACGTTACGTGCAAGACTGTTGCCAAT 16979730 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||||||||| ||| | || |||||||| ||||||||||| ||||| ||| Sbjct 16979729 ATGATCAAGGGGAAGACTCCTGAGGAGATTCGCAAGACCTTCAACATTAAG 16979679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106873228362397