Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctolagus_20cuniculus_20[refseq_20GCF_5F000003625.3_202009-10-20] 3,241 sequences; 2,737,462,810 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq12 241 2e-57 seq71 237 2e-56 seq13 224 2e-52 seq392 215 8e-50 >seq12 Length=155355395 Score = 241 bits (266), Expect = 2e-57 Identities = 207/256 (81%), Gaps = 0/256 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| |||||| ||| Sbjct 10839822 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCGCCGGGCA 10839763 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| |||||||||||||| | ||| ||| ||||||||| | Sbjct 10839762 GCAGCAGGCGCACGGCCGTCTGGATCTCGCGCGACGTGATGGTGGAGCGCTTGTTGTAGT 10839703 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| ||||||| | ||||||| |||| ||||||||||| |||||||||| Sbjct 10839702 GCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 10839643 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||| ||||||||||||||||||||||||||||| Sbjct 10839642 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 10839583 Query 1485710 AAACAAAGGACGAGTA 1485725 | || || |||||| Sbjct 10839582 ACACGTAGACCGAGTA 10839567 Score = 237 bits (262), Expect = 2e-56 Identities = 206/256 (80%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| |||||| ||| Sbjct 10895215 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCGCCGGGCA 10895274 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| |||||||||||||| | ||| ||| ||||||||| | Sbjct 10895275 GCAGCAGGCGCACGGCCGTCTGGATCTCGCGCGACGTGATGGTGGAGCGCTTGTTGTAGT 10895334 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| ||||||| | ||||||| |||| ||||| ||||| |||||||||| Sbjct 10895335 GCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGATGTCATTGACGAACGAGTTCA 10895394 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||| ||||||||||||||||||||||||||||| Sbjct 10895395 TGATGCCCATGGCCTTGGACGAGATGCCAGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 10895454 Query 1485710 AAACAAAGGACGAGTA 1485725 | || || |||||| Sbjct 10895455 ACACGTAGACCGAGTA 10895470 Score = 232 bits (256), Expect = 1e-54 Identities = 205/256 (80%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || || |||||| ||||||| |||||| ||| Sbjct 10794468 TGTACTTGGTGACAGCCTTGGTGCCCTCGGACACAGCGTGCTTGGCCAGCTCGCCGGGCA 10794527 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| |||||||||||||| | ||| ||| ||||||||| | Sbjct 10794528 GCAGCAGGCGCACGGCCGTCTGGATCTCGCGCGACGTGATGGTGGAGCGCTTGTTGTAGT 10794587 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| ||||||| | ||||||| |||| ||||||||||| |||||||||| Sbjct 10794588 GCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 10794647 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||| ||||||||||||||||||||||||||||| Sbjct 10794648 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 10794707 Query 1485710 AAACAAAGGACGAGTA 1485725 | || || |||||| Sbjct 10794708 ACACGTAGACCGAGTA 10794723 Score = 232 bits (256), Expect = 1e-54 Identities = 205/256 (80%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| || || ||| Sbjct 10913971 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCACCAGGCA 10914030 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| |||||||||||||| | ||| ||| ||||||||| | Sbjct 10914031 GCAGCAGGCGCACGGCCGTCTGGATCTCGCGCGACGTGATGGTGGAGCGCTTGTTGTAGT 10914090 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| ||||||| | ||||||| |||| ||||||||||| |||||||||| Sbjct 10914091 GCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 10914150 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||| ||||||||||||||||||||||||||||| Sbjct 10914151 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 10914210 Query 1485710 AAACAAAGGACGAGTA 1485725 | || || |||||| Sbjct 10914211 ACACGTAGACCGAGTA 10914226 Score = 228 bits (252), Expect = 1e-53 Identities = 203/254 (80%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531 |||||||||||||||||||| ||||| || ||||||||| ||||||| || || ||| Sbjct 10849105 TACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCACCAGGCAGC 10849164 Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591 | |||||||||||| |||||||||||||| | ||| ||| ||||||||| | || Sbjct 10849165 AGCAGGCGCACGGCCGTCTGGATCTCGCGCGACGTGATGGTGGAGCGCTTGTTGTAGTGC 10849224 Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 |||||||| ||||||| | ||||||| |||| ||||||||||| |||||||||||| Sbjct 10849225 GCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCATG 10849284 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAA 1485711 || ||| | ||| |||||||| |||||||||||||||||||||||||||||| Sbjct 10849285 ATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACCTGCTTGAGCACCTTGTAC 10849344 Query 1485712 ACAAAGGACGAGTA 1485725 || || |||||| Sbjct 10849345 ACGTAGACCGAGTA 10849358 Score = 228 bits (252), Expect = 1e-53 Identities = 205/256 (80%), Gaps = 1/256 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| |||| || ||||| ||| Sbjct 10867998 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGC-AGCTCGCCAGGCA 10867940 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| |||||||||||||| | ||| ||| ||||||||| | Sbjct 10867939 GCAGCAGGCGCACGGCCGTCTGGATCTCGCGCGACGTGATGGTGGAGCGCTTGTTGTAGT 10867880 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| ||||||| | ||||||| |||| ||||||||||| |||||||||| Sbjct 10867879 GCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 10867820 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||| ||||||||||||||||||||||||||||| Sbjct 10867819 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 10867760 Query 1485710 AAACAAAGGACGAGTA 1485725 | || || |||||| Sbjct 10867759 ACACGTAGACCGAGTA 10867744 Score = 228 bits (252), Expect = 1e-53 Identities = 204/256 (80%), Gaps = 0/256 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| |||||| ||| Sbjct 10945019 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCGCCGGGCA 10944960 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||||||||| || |||||||||||||| | ||| || ||||||||| | Sbjct 10944959 GTAGCAGGCGCACAGCCGTCTGGATCTCGCGCGACGTGATGGTCGAGCGCTTGTTGTAGT 10944900 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| ||||||| | ||||||| || | ||||||||||| |||||||||| Sbjct 10944899 GCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCAAAGATGTCGTTGACGAACGAGTTCA 10944840 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||| ||||||||||||||||||||||||||||| Sbjct 10944839 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 10944780 Query 1485710 AAACAAAGGACGAGTA 1485725 | || || |||||| Sbjct 10944779 ACACGTAGACCGAGTA 10944764 Score = 219 bits (242), Expect = 7e-51 Identities = 195/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || ||||||||| ||||||| || || ||| Sbjct 11013469 TGTACTTGGTGACAGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCACCAGGCA 11013410 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| |||||||||||||| | ||| || ||||||||| | Sbjct 11013409 GCAGCAGGCGCACGGCCGTCTGGATCTCGCGCGACGTGATGGTCGAGCGCTTGTTGTAGT 11013350 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| ||||||| | ||||||| |||| ||||||||||| |||||||||| Sbjct 11013349 GCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 11013290 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||| ||||||||||||||||||||||||||||| Sbjct 11013289 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 11013230 Query 1485710 AAAC 1485713 | || Sbjct 11013229 ACAC 11013226 Score = 214 bits (236), Expect = 3e-49 Identities = 201/256 (79%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || || |||||| ||||||| ||||| ||| Sbjct 10804483 TGTACTTGGTGACAGCCTTGGTGCCCTCGGACACAGCGTGCTTGGCCAGCTCGCCAGGCA 10804542 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||||||||| || |||||||||||||| | ||| || ||||||||| | Sbjct 10804543 GCAGCAGGCGCACAGCCGTCTGGATCTCGCGCGACGTGATGGTCGAGCGCTTGTTGTAGT 10804602 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| ||||||| | ||||||| |||| ||||||||||| |||||||||| Sbjct 10804603 GCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 10804662 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||| |||||| |||||||||||||||||||||| Sbjct 10804663 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGATGCACCTGCTTGAGCACCTTGT 10804722 Query 1485710 AAACAAAGGACGAGTA 1485725 | || || |||||| Sbjct 10804723 ACACGTAGACCGAGTA 10804738 Score = 201 bits (222), Expect = 2e-45 Identities = 189/241 (78%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| |||||| ||| Sbjct 11283488 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCGCCGGGCA 11283429 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| |||||||||||||| | ||| || | ||||||| | Sbjct 11283428 GCAGCAGGCGCACGGCCGTCTGGATCTCGCGCGACGTGATGGTTGAGTGCTTGTTGTAGT 11283369 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||| || | |||||| |||| |||||||||| Sbjct 11283368 GCGCCAGGCGCGACGCCTCGCCAGAAATGCGTTCAAAAATGTCGCTGACGAACGAGTTCA 11283309 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||| ||||| ||||||||||||||||||||||||||||| Sbjct 11283308 TGATGCTCATGGCCTTGGAGGATATGCCGGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 11283249 Query 1485710 A 1485710 | Sbjct 11283248 A 11283248 >seq71 Length=2041368 Score = 237 bits (262), Expect = 2e-56 Identities = 206/256 (80%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| |||||| ||| Sbjct 658207 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCGCCGGGCA 658266 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| |||||||||||||| | ||| || ||||||||| | Sbjct 658267 GCAGCAGGCGCACGGCCGTCTGGATCTCGCGCGACGTGATGGTCGAGCGCTTGTTGTAGT 658326 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| ||||||| | ||||||| |||| ||||||||||| |||||||||| Sbjct 658327 GCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 658386 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||| || ||||||||||||||||||||||||||||| Sbjct 658387 TGATGCCCATGGCCTTGGAGGAGATCCCGGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 658446 Query 1485710 AAACAAAGGACGAGTA 1485725 | || || |||||| Sbjct 658447 ACACGTAGACCGAGTA 658462 Score = 232 bits (256), Expect = 1e-54 Identities = 205/256 (80%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| |||||| ||| Sbjct 375841 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCGCCGGGCA 375900 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| |||||||| |||||||||||||| | ||| ||| ||||||||| | Sbjct 375901 GCAGCAGACGCACGGCCGTCTGGATCTCGCGCGACGTGATGGTGGAGCGCTTGTTGTAGT 375960 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| | ||||||| |||| ||||||||||| |||||||||| Sbjct 375961 GCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 376020 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||| ||||||||||||||||||||||||||||| Sbjct 376021 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 376080 Query 1485710 AAACAAAGGACGAGTA 1485725 | || || |||||| Sbjct 376081 ACACGTAGACCGAGTA 376096 Score = 232 bits (256), Expect = 1e-54 Identities = 205/256 (80%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| |||||| ||| Sbjct 385922 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCGCCGGGCA 385981 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| |||||||||||||| | ||| || ||||||||| | Sbjct 385982 GCAGCAGGCGCACGGCCGTCTGGATCTCGCGCGACGTGATGGTCGAGCGCTTGTTGTAGT 386041 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| | ||||||| |||| ||||||||||| |||||||||| Sbjct 386042 GCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 386101 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||| ||||||||||||||||||||||||||||| Sbjct 386102 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 386161 Query 1485710 AAACAAAGGACGAGTA 1485725 | || || |||||| Sbjct 386162 ACACGTAGACCGAGTA 386177 Score = 232 bits (256), Expect = 1e-54 Identities = 205/256 (80%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| |||||| ||| Sbjct 691364 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCGCCGGGCA 691423 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| |||||||||||||| | ||| || ||||||||| | Sbjct 691424 GCAGCAGGCGCACGGCCGTCTGGATCTCGCGCGACGTGATGGTCGAGCGCTTGTTGTAGT 691483 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| | ||||||| |||| ||||||||||| |||||||||| Sbjct 691484 GCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 691543 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||| ||||||||||||||||||||||||||||| Sbjct 691544 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 691603 Query 1485710 AAACAAAGGACGAGTA 1485725 | || || |||||| Sbjct 691604 ACACGTAGACCGAGTA 691619 Score = 232 bits (256), Expect = 1e-54 Identities = 205/256 (80%), Gaps = 0/256 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || ||||||||| ||||||| ||||| ||| Sbjct 712043 TGTACTTGGTGACAGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCGCCAGGCA 711984 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| |||||||||||||| | ||| ||| ||||||||| | Sbjct 711983 GCAGCAGGCGCACGGCCGTCTGGATCTCGCGCGACGTGATGGTGGAGCGCTTGTTGTAGT 711924 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| ||||||| | ||||||| |||| ||||||||||| |||||||||| Sbjct 711923 GCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 711864 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||| ||||||||||||||||||||||||||||| Sbjct 711863 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 711804 Query 1485710 AAACAAAGGACGAGTA 1485725 | || || |||||| Sbjct 711803 ACACGTAGACCGAGTA 711788 >seq13 Length=143360832 Score = 224 bits (248), Expect = 2e-52 Identities = 196/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| |||||| ||| Sbjct 42190202 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCGCCGGGCA 42190143 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| ||||||||||| |||| ||| || ||||||||| | Sbjct 42190142 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 42190083 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| | ||||||| |||| ||||||||||| |||||||||| Sbjct 42190082 GCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 42190023 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||| ||||||||||||||||||||| ||||||| Sbjct 42190022 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACCTGCTTGAGTACCTTGT 42189963 Query 1485710 AAAC 1485713 | || Sbjct 42189962 ACAC 42189959 Score = 215 bits (238), Expect = 8e-50 Identities = 194/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || ||||||||| ||||||| |||||| ||| Sbjct 42144910 TGTACTTGGTGACAGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCGCCGGGCA 42144851 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||||||||| || ||||||||||| |||| ||| || ||||||||| | Sbjct 42144850 GCAGCAGGCGCACAGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 42144791 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| | ||||||| |||| ||||||||||| |||||||||| Sbjct 42144790 GCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 42144731 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||| |||||||||||| |||||||||||||||| Sbjct 42144730 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACTTGCTTGAGCACCTTGT 42144671 Query 1485710 AAAC 1485713 | || Sbjct 42144670 ACAC 42144667 Score = 123 bits (136), Expect = 4e-22 Identities = 167/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || || |||||| ||||||| || || ||| Sbjct 12617606 TGTACTTGGTGACGGCCTTGGTGCCCTCAGACACAGCGTGCTTGGCCAGCTCCCCAGGCA 12617665 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGC-GCTTGTTAGTG 1485588 | ||| |||||||| ||||||| || |||| | | ||| ||| || | ||| Sbjct 12617666 GCAGCAGACGCACGGCCGTCTGGACTTCCCGGGAGGTCAGTGTGCTGCGGCCCG--AGTA 12617723 Query 1485589 C-GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | | ||||| || | |||||| | | || || | | ||||| ||||||||||| Sbjct 12617724 CTGGGCCAGCTGGGCAGCCTCGCCAGCCAGTCGCTCAAAGACATCGTTCACAAACGAGTT 12617783 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGC 1485696 |||||| ||| | || ||||||||| | ||| |||||||||||| Sbjct 12617784 CATGATGCTCATGGCCCTGGCGGAGATGCCGATGTCAGGGTGCACCTGC 12617832 >seq392 Length=196526 Score = 215 bits (238), Expect = 8e-50 Identities = 194/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| |||||| ||| Sbjct 31438 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCGCCGGGCA 31379 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| |||||||| ||||| | |||||| | ||| || ||||||||| | Sbjct 31378 GCAGCAGACGCACGGCCGTCTGCACCTCGCGCGACGTGATGGTCGAGCGCTTGTTGTAGT 31319 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| | ||||||| |||| ||||||||||| |||||||||| Sbjct 31318 GCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 31259 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||| ||||||||||||||||||||||||||||| Sbjct 31258 TGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGTGCACCTGCTTGAGCACCTTGT 31199 Query 1485710 AAAC 1485713 | || Sbjct 31198 ACAC 31195 Score = 203 bits (224), Expect = 5e-46 Identities = 194/246 (79%), Gaps = 2/246 (1%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| |||||| ||| Sbjct 35224 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCGCCGGGCA 35283 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| |||||||| ||||| | |||||| | ||| || ||||||||| | Sbjct 35284 GCAGCAGACGCACGGCCGTCTGCACCTCGCGCGACGTGATGGTCGAGCGCTTGTTGTAGT 35343 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| | ||||||| |||| ||||||||||| |||||||||| Sbjct 35344 GCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 35403 Query 1485650 TGATCGACATCG-ATTTGTTGGAGATGCCCACGTCGGGGTGCACCT-GCTTGAGCACCTT 1485707 |||| ||| | || | |||||||| |||||||||||||| ||||||||||||| Sbjct 35404 TGATGCCCATGGCCTTGGGACGAGATGCCGGTGTCGGGGTGCACCTGGCTTGAGCACCTT 35463 Query 1485708 GTAAAC 1485713 ||| || Sbjct 35464 GTACAC 35469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915901640047799