Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctolagus_20cuniculus_20[refseq_20GCF_5F000003625.3_202009-10-20] 3,241 sequences; 2,737,462,810 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq7 86.0 1e-11 >seq7 Length=173684459 Score = 86.0 bits (94), Expect = 1e-11 Identities = 138/197 (70%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | ||||| | || |||| | || | || | || || |||| | Sbjct 2561317 TGCAGATCTTCGTGAAAACCCTTACGGGAAGACCA-TCACGCTCGAGGTTGAACCCTCGG 2561259 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || ||||||||||| ||||| || ||| ||||| ||||| || ||||| | Sbjct 2561258 ATACAATAGAAAATGTAAAAGCCAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAGC 2561199 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| |||||||| || || ||| | || ||| | || ||| | || || || | Sbjct 2561198 AAAGACTGATTTTTGCTGGCAAGCAACTGGAAGATGGATGGACTTTATCTGACTACAACA 2561139 Query 146212 TACAAAAAGAATCGACT 146228 | ||||| || || ||| Sbjct 2561138 TTCAAAAGGAGTCTACT 2561122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786134550433720