Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctolagus_20cuniculus_20[refseq_20GCF_5F000003625.3_202009-10-20] 3,241 sequences; 2,737,462,810 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq19 163 6e-35 seq7 149 1e-30 seq13 134 3e-26 seq14 127 4e-24 seq17 118 2e-21 seq1 118 2e-21 seq112 116 7e-21 seq2 116 7e-21 seq12 114 3e-20 seq110 105 1e-17 seq9 105 1e-17 seq15 98.7 2e-15 seq4 96.9 7e-15 seq28 86.0 1e-11 seq204 84.2 4e-11 >seq19 Length=57279966 Score = 163 bits (180), Expect = 6e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||||| |||||| || | |||||| || || |||||||| || || || |||| Sbjct 4088028 TACCACCTCTCAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAG 4087969 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | || ||||| || || || || || ||||| || || || || || |||| Sbjct 4087968 AAAGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCGGGAG 4087909 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||||||||| || ||||| || || ||||| || || || || | || || | Sbjct 4087908 GAATGCCTTCCTTATCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCGCTGGGCTCCA 4087849 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 | ||||| || || |||||||| |||| ||||| || || ||||||||| Sbjct 4087848 CCTCCAAGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATT 4087799 Score = 161 bits (178), Expect = 2e-34 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||||| |||||| || | |||||| || || |||||||| || || || |||| Sbjct 4088484 TACCACCTCTCAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAG 4088425 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | || ||||| || || || ||||||||||| || || || || || |||| Sbjct 4088424 AAAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAG 4088365 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||||||||| || ||||| || || ||||| || || || || | || || | Sbjct 4088364 GAATGCCTTCCTTATCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCGCTGGGCTCCA 4088305 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||| || || |||||||| || | ||||| || || |||||||| Sbjct 4088304 CCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 4088256 Score = 156 bits (172), Expect = 8e-33 Identities = 172/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||||| |||||| || | |||||| || || |||||||| || || || |||| Sbjct 4088256 TACCACCTCTCAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAG 4088197 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | || ||||| || || || || || ||||| || || || || || |||| Sbjct 4088196 AAAGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCGGGAG 4088137 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||||||||| || ||||| || || || || || || || ||| | || || | Sbjct 4088136 GAATGCCTTCCTTATCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCA 4088077 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||| ||| || |||||||| || | ||||| || || |||||||| Sbjct 4088076 CCTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 4088028 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || |||| ||| || || | ||||| || || |||||||| || || || ||||| Sbjct 4088710 CCACCCCTCAGACGGAGGACCAGATGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAA 4088651 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| | | || ||||| || || || || || ||||| || || || || || ||||| Sbjct 4088650 AGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCAGGAGGA 4088591 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || ||||||||||| || ||||| || || || || || || || ||| | || || || Sbjct 4088590 ATGCCTTCCTTATCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 4088531 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || |||||||| || | ||||| || || |||||||| Sbjct 4088530 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 4088484 Score = 122 bits (134), Expect = 2e-22 Identities = 153/205 (75%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 82607 GTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTA-CCGTCTTCTAGTT 82665 ||| |||||| | |||| || || || || ||||||| || ||| || ||||| |||| Sbjct 43334540 GTGAAGAGTAACTCCTTT-TGAATGTTGTAGTCAGATA-AAGTCTGTCCATCTTCCAGTT 43334483 Query 82666 GTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCT 82725 | || ||||||||||| |||||||| ||||| ||||| |||||||||||||| || || | Sbjct 43334482 GCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTT 43334423 Query 82726 TTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTG 82785 | || ||| ||||||| || ||||| ||||| || | | | || || || || Sbjct 43334422 TGGCCTTTGCATTTTCTATTGTATC-GAGGGTTCAACCTTGAGTGCGATGGTGTTCCCCA 43334364 Query 82786 TCAACGTCTTTACAAATATCTGCAT 82810 | || || ||||| || ||||| || Sbjct 43334363 TAAAGGTTTTTACGAAGATCTGTAT 43334339 >seq7 Length=173684459 Score = 149 bits (164), Expect = 1e-30 Identities = 156/204 (76%), Gaps = 1/204 (0%) Strand=Plus/Plus Query 82607 GTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTG 82666 ||| |||||||| || || || || || || ||||||| | | | || ||||| ||||| Sbjct 2561116 GTGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGATAAAGTCCATCCATCTTCCAGTTG 2561175 Query 82667 TTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTT 82726 || |||||||| || |||||||| ||||| ||||| |||||||||||||| || || || Sbjct 2561176 CTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTT 2561235 Query 82727 TGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 |||||||||||||| || ||||| ||||| || || | || || ||||| || || Sbjct 2561236 GGCTTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGCGTGATGGTCTT-CCCGT 2561294 Query 82787 CAACGTCTTTACAAATATCTGCAT 82810 | || || || || |||||||| Sbjct 2561295 AAGGGTTTTCACGAAGATCTGCAT 2561318 >seq13 Length=143360832 Score = 134 bits (148), Expect = 3e-26 Identities = 113/139 (81%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 82612 GAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTC 82671 ||||||| || || || || || || ||||||| | | | || ||||| ||||| || | Sbjct 88039076 GAGTAGACTCCTTTTGAATGTTGTAGTCAGATAAAGTCCGTCCATCTTCCAGTTGCTTGC 88039017 Query 82672 CAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTT 82731 ||||||| || |||||||| ||||| ||||| |||||||||||||| || || ||||||| Sbjct 88039016 CAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTTGCTT 88038957 Query 82732 TTACATTTTCAATCGTATC 82750 |||||||||| || ||||| Sbjct 88038956 TTACATTTTCTATTGTATC 88038938 >seq14 Length=163896628 Score = 127 bits (140), Expect = 4e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 |||||| |||| |||||| || ||||||||||| || |||||| | || || || || || Sbjct 150521851 ACCTCCCCTCAGACGCAGGACCAAGTGCAGAGTGGACTCTTTCGGGATGTTGTAGTCGGA 150521910 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || | | || ||||| || || || ||||||||||| || || || || | || || Sbjct 150521911 CAGGGTGCGTCCATCTTCCAGGTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTAAGGGGG 150521970 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 | || ||||| || || ||||| || || || || | || || ||| | || || || Sbjct 150521971 CGTGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTCTAGATGGTGTCACTGGGCTCCAC 150522030 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || |||||||| |||| ||||| || || |||||||| Sbjct 150522031 CTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 150522078 Score = 84.2 bits (92), Expect = 4e-11 Identities = 105/143 (73%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 |||||| |||| | |||| ||||||||||| ||||||||||| || || || ||||| Sbjct 161574210 ACCTCCCCTCAGGCAGGGAAC-AAGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCAGA 161574152 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || | || ||||| || || || | |||||||| | || || || || || || Sbjct 161574151 CAGGGTGTGTCCATCTTCCAGCTGCTTCCTGGCAAAGATCAACCTCTGCTGGTCAGGGGG 161574092 Query 82703 TATTCCTTCCTTATCTTGAATCT 82725 || |||||||| ||||| |||| Sbjct 161574091 GATGCCTTCCTTGTCTTGGATCT 161574069 >seq17 Length=85008467 Score = 118 bits (130), Expect = 2e-21 Identities = 112/141 (79%), Gaps = 3/141 (2%) Strand=Plus/Minus Query 82611 AGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTA-CCGTCTTCTAGTTGTTT 82669 ||||| || || || | || || || |||||||||| || | || ||||| ||||| || Sbjct 56426635 AGAGTGGACTCCTT--GAATGTTGTAGTCAGATAGAAGTCCATCCATCTTCCAGTTGCTT 56426578 Query 82670 TCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGC 82729 ||||||||||| |||||||| ||||| ||||| ||||| ||||||||||| || || || Sbjct 56426577 ACCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCATCCTTATCTTGGATTTTGGC 56426518 Query 82730 TTTTACATTTTCAATCGTATC 82750 |||| |||||| | ||||| Sbjct 56426517 CTTTATATTTTCTGTTGTATC 56426497 >seq1 Length=194850757 Score = 118 bits (130), Expect = 2e-21 Identities = 163/227 (72%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || |||| | | || || |||||||| || || |||||||| || ||||||||||| Sbjct 134277681 CCACCCCTCAGATGGAGGACAAAGTGCAG-GTGGACTCTTTCTGGATGTTATAATCAGAA 134277739 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| | | |||| || || || || ||||| || || || | || || ||||| Sbjct 134277740 AGAGTGTGGCTATCTTTCAGCTGCTTGCCTGCAAAAATGAGCCTCTCCTGGTCAGGAGGG 134277799 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||| ||||||||| ||||| || | ||||| || || | |||| || || || Sbjct 134277800 ATGCCTTTCTTATCTTGGATCTTGGCCATGACATTCTCCATGATGCCATTGGGCTCCACC 134277859 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||| || || |||||||| |||| ||||| || || || ||||| Sbjct 134277860 TCCTGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 134277906 >seq112 Length=1107004 Score = 116 bits (128), Expect = 7e-21 Identities = 136/181 (75%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 82604 TAAG-TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTA 82662 |||| || ||||| | || || || | || || ||||||| | | | || |||| | Sbjct 705468 TAAGATGAAGAGTGGGCTCCTTTTGAGTGTTGTAGTCAGATAAAGTCCATCCACCTTCCA 705527 Query 82663 GTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAA 82722 ||| || ||||||||||| |||||||| ||||| | ||| |||||||||||||| || | Sbjct 705528 ATTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGAAGGAATTCCTTCCTTATCCTGGA 705587 Query 82723 TCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGC 82782 |||| || ||||||||||| | |||||| | |||||||| || | | || ||||| | Sbjct 705588 TCTTGGCCTTTACATTTTCTTTTGTATCAAT-GGTTCTACCTCAAGTATGATGGTCTTCC 705646 Query 82783 C 82783 | Sbjct 705647 C 705647 >seq2 Length=174332312 Score = 116 bits (128), Expect = 7e-21 Identities = 126/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||||| |||||| || | ||||| ||||| |||||||| || || || ||||| Sbjct 24775740 CCACCTCTCAGACGCAGGACAAGGTGCAAGGTAGACTCTTTCTGGATGTTGTAGTCAGAA 24775681 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| | | || ||||| || || || ||||| ||||| || || || || || ||||| Sbjct 24775680 AGAGTACGGCCATCTTCCAGCTGCTTGCCAGCGAAGATGAGCCTCTGCTGGTCAGGAGGA 24775621 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATC 82750 || ||||||||||| || ||||| || || | ||| || || || || Sbjct 24775620 ATGCCTTCCTTATCCTGGATCTTGGCCTTGAGATTGTCGATGGTGTC 24775574 >seq12 Length=155355395 Score = 114 bits (126), Expect = 3e-20 Identities = 130/173 (75%), Gaps = 1/173 (1%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||||||| | || || || | || |||||| | ||| || || | |||||| Sbjct 56601158 TGAAGAGTAGATGCCTTTTGAATGTCGTAGTCAGATGAAGTTCATCCATCCCCCAGTTGT 56601217 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || ||||||||||| |||| ||||||||| ||||| || |||||||||| || ||||| Sbjct 56601218 TTGCCAGCAAAGATCAGTCCTTGTTGATCGGGAGGAATGCCTTCCTTATTCTGGATCTTG 56601277 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTT 82780 || || |||||||| | ||||| | |||||| | || | || || ||||| Sbjct 56601278 GCCTTCACATTTTCTGTTGTATC-TGAGGTTCATCCTCAAGTGTGATGGTCTT 56601329 Score = 109 bits (120), Expect = 1e-18 Identities = 122/163 (75%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 60149 GCATTATGGTGGTACTATATATCTAAAGGTATAGAATACTTAGATACGGTGTTTTTCATA 60208 || ||||||||||||| | |||||||||| | ||||| || || || |||||||| || Sbjct 66863387 GCTTTATGGTGGTACTTTGTATCTAAAGGAGTTGAATATTTGGACACAGTGTTTTTTATC 66863328 Query 60209 CTTAGGAAAAAGTTTAATCAGGTTAGTTTTTTACACGTATATCATCATTTTACTATGTTT 60268 ||| |||| || ||||| ||| ||| | || ||||| || || | ||| |||||| Sbjct 66863327 CTTCGGAAGAAAAACAATCAAGTTTCTTTCCTTCATGTATACCACCACTGTACCATGTTT 66863268 Query 60269 ACTTTAGGATGGGTAGGCATTAAATGGTTTGCCGGAGGTCAAG 60311 || || | ||| | || ||||||||| |||| || || |||| Sbjct 66863267 ACATTGTGGTGGATTGGGATTAAATGGGTTGCAGGGGGACAAG 66863225 >seq110 Length=1165285 Score = 105 bits (116), Expect = 1e-17 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 82635 TAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGA 82694 ||||||||| | |||| || ||||| |||| || ||||||||||| | | |||| ||| Sbjct 970103 TAATCAGATGCAGTTCTTCCATCTTCCCGTTGCTTGCCAGCAAAGATCAATATTTGCTGA 970162 Query 82695 TCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTA 82754 || ||||| ||||| ||| ||||||| |||| | ||||||||||| | ||||| Sbjct 970163 TCAGGAGGAATTCCATCCGTATCTTGGATCTCAACCTTTACATTTTCTTTTGTATCCGAG 970222 Query 82755 GGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| | || | | || ||||| || || | || |||| || |||||||| Sbjct 970223 GGTTCAAGCTCAAGTGAGATGGTCTTCCCCGTAATGGTTTTTATGAAAATCTGCAT 970278 >seq9 Length=116251907 Score = 105 bits (116), Expect = 1e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 82620 TCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAG 82679 || || || || || || |||||| | |||| || ||||| ||| || |||||||| Sbjct 47674486 TCCTTTTGAATGTTGTAGTCAGATGCAGTTCTTCCATCTTCCCATTGCTTGCCAGCAAAA 47674545 Query 82680 ATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTT 82739 || | | |||| ||||| ||||| ||||| ||||||||||| |||| | ||||||||| Sbjct 47674546 ATCAATATTTGCTGATCAGGAGGAATTCCATCCTTATCTTGGATCTCAACCTTTACATTT 47674605 Query 82740 TCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACA 82799 || | ||||| ||||| | ||| | | || ||||| || || | || |||| Sbjct 47674606 TCTTTTGTATCCGAGGGTTCAAGTTCAAGTGAGATGGTCTTCCCCGTAACAGTTTTTATG 47674665 Query 82800 AATATCTGCAT 82810 || |||||||| Sbjct 47674666 AAAATCTGCAT 47674676 >seq15 Length=109054052 Score = 98.7 bits (108), Expect = 2e-15 Identities = 201/299 (67%), Gaps = 0/299 (0%) Strand=Plus/Minus Query 50686 ACTTCTCTTATTTCTGGATATGCTATTTTTTCGAATATGATTTGAGCTATTCTATCACCC 50745 |||||| |||||||||||| || ||| | |||| || || ||||| |||||| Sbjct 46625647 ACTTCTTCTATTTCTGGATAAAAAATCCGTTCACAAATGAGCTGTGCAATTCTGTCACCC 46625588 Query 50746 TTGGATACATTAAATTGTGTAGAACCGAAATTAAATAATAGAACACTTACGTTACCTCTA 50805 || || | ||| | | || |||||||| |||| ||||| || || |||||| Sbjct 46625587 TTTTTGACTTCAAACTTTTCTTTGCCAAAATTAAACAATACAACACCAACATTTCCTCTA 46625528 Query 50806 TAGTCTGAGTCAATTACACCAGCACCTACGTCTATAAAATAATTATAAGCAAGCCCTGAT 50865 || ||| || || |||||||| || || ||||| || || || ||| | || || Sbjct 46625527 TAATCTTCATCTATAACACCAGCTCCCACATCTATGAAGTATTTTGCAGCCAAGCCAGAA 46625468 Query 50866 CTAGGAGCTATTCTACCGTAGTATCCATTAGGTATTTTTATAATTATATCTGTTTTTATT 50925 | ||||||||||| || ||| ||||| ||| | ||| || || ||||| | Sbjct 46625467 CGTGGAGCTATTCTTCCATAGCATCCAGAAGGAAGAGCTATCTGAATGTCCGTTTTCACA 46625408 Query 50926 AATTCCTTATCCATAGGTTCTATTACATAATCATACGCGCTATATAAGTCATAACCAGC 50984 | | || ||||||||| || ||||||||| || || || | ||| || || || Sbjct 46625407 ATGGCTTTCTCCATAGGTGGTACGGTATAATCATAAGCACTGTACAGGTCGTAGCCCGC 46625349 >seq4 Length=91394100 Score = 96.9 bits (106), Expect = 7e-15 Identities = 117/158 (74%), Gaps = 1/158 (1%) Strand=Plus/Minus Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 |||||||| ||||| || | ||||||||| |||| || |||| ||| ||||||||| Sbjct 78197580 CCGTCTTCCAGTTGCTTGC-AGCAAAGATCAGTCCCTGCTGATTACAAGGAATTCCTTCC 78197522 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772 ||||| || ||||| || || || ||||| ||||||| ||||| || || | || Sbjct 78197521 TTATCCTGGATCTTGGCCTTCACGTTTTCTGTCGTATCTGAGGGTTCAACCTCAAGGGTG 78197462 Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || |||| |||| | || |||||||| ||||| || Sbjct 78197461 ATGATCTTCTCTGTAAGGGTTTTTACAAAGATCTGTAT 78197424 >seq28 Length=6663442 Score = 86.0 bits (94), Expect = 1e-11 Identities = 107/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 82607 GTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTG 82666 ||| ||||| || || || || || | || |||||| | | | |||||||| ||| | Sbjct 3456874 GTGAAGAGTGGACTCCTTTTGAATGCTGTAGGCAGATAAAGTCCATCCGTCTTCCAGTCG 3456933 Query 82667 TTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTT 82726 || ||| |||||| |||||||| |||| ||| || || ||||||| ||| || || || Sbjct 3456934 CTTGCCAT-AAAGATCAGTCTTTGCTGAT-TGGGGGAATCCCTTCCTGATCCTGGATTTT 3456991 Query 82727 TGCTTTTACATTTTCAATCGTATC 82750 || ||||||||||| | ||||| Sbjct 3456992 GGCCTTTACATTTTCTGTTGTATC 3457015 >seq204 Length=557480 Score = 84.2 bits (92), Expect = 4e-11 Identities = 155/223 (70%), Gaps = 6/223 (3%) Strand=Plus/Plus Query 82590 CTCAAACGCAGAAC--TAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAA 82647 |||| | ||||||| ||||||||| | ||| |||||||| || || ||||| | || Sbjct 156500 CTCACAGGCAGAACACTAAGTGCAG-GAAGACTCTTTCTGGATGTTGTAATCTGGCAGTG 156558 Query 82648 TTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTC 82707 | || ||| ||||||||||| | |||| | ||| ||||| || | || | | Sbjct 156559 TC--ACTGTCATCTAGTTGTTTGCTCACAAATGTCAGTTACTGTTGGTCAGAGGGGACAC 156616 Query 82708 CTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCA 82767 | || || |||||||| || ||||| ||| ||||| | || ||| | | | || || | Sbjct 156617 CCTCTTTGTCTTGAATTTTGGCTTTGACAATTTCAGTGGTGTCACTGGACTTGACCTCAA 156676 Query 82768 AAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||| || |||| || | | ||||| |||| |||||||| Sbjct 156677 GAGTGATTTTCTTCCCACT-AGTGTCTTCACAAGGATCTGCAT 156718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981786429318699