Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctolagus_20cuniculus_20[refseq_20GCF_5F000003625.3_202009-10-20] 3,241 sequences; 2,737,462,810 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq7 93.3 4e-14 >seq7 Length=173684459 Score = 93.3 bits (102), Expect = 4e-14 Identities = 151/216 (70%), Gaps = 1/216 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | || || ||||| | || |||| | | |||||| |||| || ||| || Sbjct 2561318 ATGCAGATCTTCGTGAAAACCCTTACGGGAAGACC-ATCACGCTCGAGGTTGAACCCTCG 2561260 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| || || | |||||| ||||| ||||| || || || || || |||||| Sbjct 2561259 GATACAATAGAAAATGTAAAAGCCAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 2561200 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 |||||||| |||| | ||||| ||||| ||||||| | | | | || ||||| Sbjct 2561199 CAAAGACTGATTTTTGCTGGCAAGCAACTGGAAGATGGATGGACTTTATCTGACTACAAC 2561140 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGA 25390 |||||||| || || || |||| | ||||| ||| Sbjct 2561139 ATTCAAAAGGAGTCTACTCTTCACCTTGTGTTGAGA 2561104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445076368113120