Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctolagus_20cuniculus_20[refseq_20GCF_5F000003625.3_202009-10-20] 3,241 sequences; 2,737,462,810 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq119 98.7 8e-16 >seq119 Length=1067461 Score = 98.7 bits (108), Expect = 8e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 44123 GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCG 44182 |||||||| | || || ||||| | ||||||||||| ||||| || || || |||||| Sbjct 31766 GGAGAACGCGTCGTAGCCTTTGCTGCGGTGGAAGGCATCTTCTTCTCTGGTTCTTTTGCG 31825 Query 44183 GCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTA 44242 | || || ||| | ||||||||||| ||||||| ||| | ||||| || |||||| | Sbjct 31826 TCGATTTTCTGGCTCAAGAAACGAGGACTGATGCCCGGGCTTACGTTCTCCAATGAGCTT 31885 Query 44243 ATAAGTCGTGATGA 44256 || || | ||||| Sbjct 31886 ATTAGCAGGGATGA 31899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397440300612205