Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctolagus_20cuniculus_20[refseq_20GCF_5F000003625.3_202009-10-20] 3,241 sequences; 2,737,462,810 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq119 96.9 4e-15 >seq119 Length=1067461 Score = 96.9 bits (106), Expect = 4e-15 Identities = 105/134 (78%), Gaps = 4/134 (3%) Strand=Plus/Plus Query 59980 AACGTCTCATAGCTTTTGCATGCG-TGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTG-C 60037 |||| || |||| ||||| |||| ||||||| |||||||||||||| || || || | | Sbjct 31770 AACGCGTCGTAGCCTTTGC-TGCGGTGGAAGGCATCTTCTTCTCTGGTTC-TTTTGCGTC 31827 Query 60038 TATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGAT 60097 |||||||||||||| || || || || ||||| || || | |||||||| ||||| || Sbjct 31828 GATTTTCTGGCTCAAGAAACGAGGACTGATGCCCGGGCTTACGTTCTCCAATGAGCTTAT 31887 Query 60098 TTCCCGGGACGAGG 60111 | | |||| |||| Sbjct 31888 TAGCAGGGATGAGG 31901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548502577889040