Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctolagus_20cuniculus_20[refseq_20GCF_5F000003625.3_202009-10-20] 3,241 sequences; 2,737,462,810 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq19 152 1e-31 seq188 138 3e-27 seq7 118 3e-21 seq2 114 3e-20 seq656 113 1e-19 seq15 105 2e-17 seq11 100 7e-16 seq14 95.1 3e-14 seq110 93.3 1e-13 seq9 93.3 1e-13 seq3241 91.5 4e-13 seq1 87.8 4e-12 seq121 84.2 5e-11 >seq19 Length=57279966 Score = 152 bits (168), Expect = 1e-31 Identities = 162/214 (76%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| ||||| || ||||| ||||| |||| ||||| || | | ||| | ||||| Sbjct 4088012 CAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATC 4087953 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| |||||||| || |||||||| || | || |||||||| ||||| |||||||| || Sbjct 4087952 TTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTTATC 4087893 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||| ||| ||||||||||| || ||||| || || ||||| || Sbjct 4087892 CTGGATCTTGGCCTTGACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAAGGTGATGGT 4087833 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 |||||| |||| || || | ||| | |||||| Sbjct 4087832 CTTGCCGGTCAGGGTCTTCACGAAGATCTGCATT 4087799 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| ||||| || ||||| ||||| |||| ||||| || | | ||| | ||||| Sbjct 4088240 CAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATC 4088181 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| |||||||| || |||||||| || | || |||||||| ||||| |||||||| || Sbjct 4088180 TTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTTATC 4088121 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||| || ||||||||||| || ||||| || | ||||| || Sbjct 4088120 CTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGT 4088061 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||| || | || || | ||| | ||||| Sbjct 4088060 CTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 4088028 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| ||||| || ||||| ||||| |||| ||||| || | | ||| | ||||| Sbjct 4088468 CAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATC 4088409 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| |||||||| ||||| ||||| || | || ||||| || ||||| |||||||| || Sbjct 4088408 TTCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTATC 4088349 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||| ||| ||||||||||| || ||||| || | ||||| || Sbjct 4088348 CTGGATCTTGGCCTTGACATTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGT 4088289 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||| || | || || | ||| | ||||| Sbjct 4088288 CTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 4088256 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || || || ||||| ||||| |||| ||||| || | | ||| | |||||| Sbjct 4088695 AGGACCAGATGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCT 4088636 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || | || ||||| || ||||| |||||||| || Sbjct 4088635 TCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTATCC 4088576 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || ||||| || | ||||| ||| Sbjct 4088575 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 4088516 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | || || | ||| | ||||| Sbjct 4088515 TTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 4088484 >seq188 Length=611413 Score = 138 bits (152), Expect = 3e-27 Identities = 159/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||| || ||||| || ||||| || || |||| ||||| |||| || || | || || Sbjct 74127 CAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTC 74186 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| |||||||| || || ||||| || | || |||||||| || || || |||||||| Sbjct 74187 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGGATGCCCTCCTTGTC 74246 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 ||||||||| ||| ||| ||||||||||| || ||||| || | ||||| || Sbjct 74247 CTGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGT 74306 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 |||||| || || ||||| | ||| | |||||| Sbjct 74307 CTTGCCAGTTAAGGTTTTCACGAAGATCTGCATT 74340 Score = 127 bits (140), Expect = 5e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| | ||| || ||||| || || |||| ||||| |||| || || | ||||| Sbjct 73671 CAGGACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATC 73730 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| |||||||| || || || || || | || |||||||| || || || |||||||| Sbjct 73731 TTCCAGCTGCTTGCCGGCAAATATCAGCCTCTGCTGGTCGGGGGGGATGCCCTCCTTGTC 73790 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||| ||| ||||||||||| || ||||| || | ||||| || Sbjct 73791 CTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGT 73850 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||| |||| || || | ||| | ||||| Sbjct 73851 CTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 73883 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||| || ||||| || ||||| || || |||| ||||| |||| || || | || || Sbjct 73899 CAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTC 73958 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| |||||||| || || ||||| || | || |||||||| || || || |||||||| Sbjct 73959 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGGATGCCCTCCTTGTC 74018 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||| || ||||||||||| || ||||| || | ||||| || Sbjct 74019 CTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGT 74078 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||| |||| || || | ||| | ||||| Sbjct 74079 CTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 74111 >seq7 Length=173684459 Score = 118 bits (130), Expect = 3e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| | ||| || ||||| || || |||| ||||| |||| || || | ||||| Sbjct 24645085 CAGGACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATC 24645026 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| ||||| || | || ||||| || | || ||||| || || || || |||||||| Sbjct 24645025 TTCCAGCTGTTTGCTGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 24644966 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||| ||| ||||||||||| || ||||| || | ||||| || Sbjct 24644965 CTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGT 24644906 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||| |||| || || | ||| | ||||| Sbjct 24644905 CTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 24644873 >seq2 Length=174332312 Score = 114 bits (126), Expect = 3e-20 Identities = 134/181 (74%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||||||||| | || || ||||| |||| ||||| || | | ||| | ||||| Sbjct 24775726 CAGGACAAGGTGCAAGGTAGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCATC 24775667 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| |||||||| ||||||||||| || | || ||||| || ||||| |||||||| || Sbjct 24775666 TTCCAGCTGCTTGCCAGCGAAGATGAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTATC 24775607 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||| | | ||||||||||| | | ||||| | | ||||| || Sbjct 24775606 CTGGATCTTGGCCTTGAGATTGTCGATGGTGTCGCTGCTCTCCACCTAGAGGGTGATGGT 24775547 Query 225681 C 225681 | Sbjct 24775546 C 24775546 >seq656 Length=88228 Score = 113 bits (124), Expect = 1e-19 Identities = 124/165 (75%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 7551 CCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTAT 7610 |||| || | || || || || || || ||| ||||||| || |||||||| | || || Sbjct 71734 CCAAATTCATAATGTAATCATCACTGCACATACCTTTGTAATAATTTTCTTCATAGTAAT 71793 Query 7611 GCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGA 7670 || | ||||| || ||||| ||||| ||| | || || ||||| ||||| || ||||| Sbjct 71794 ACCTATCATGATTGGAGGTTTTGGAAACTGACTAGTCCCATTAATAATTGGGGCCCCTGA 71853 Query 7671 TATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACC 7715 ||| |||||||| | | ||||||||||| |||||| | || || Sbjct 71854 TATAGCTTTTCCCTGTGTAAACAATATAAGCTTTTGACTCCTCCC 71898 >seq15 Length=109054052 Score = 105 bits (116), Expect = 2e-17 Identities = 155/216 (72%), Gaps = 5/216 (2%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| | |||||||||||| || || |||| ||||| || | ||| || | ||||| Sbjct 17280330 CAGGACTAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAAGGTACATCCATC 17280271 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCG--GGCGGAATACCTTCCTTG 225618 ||| || || ||||||| |||||| | | || | ||| |||| || ||||| ||| Sbjct 17280270 TTCCAGGTGTTTCCCAGTGAAGATCAACCTTTTCTAGTCACAGGCG--ATGCCTTCTTTG 17280213 Query 225619 TCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATC 225678 ||||||||| ||||| | ||| || | |||||| || | || || | ||||| Sbjct 17280212 TCTTGGATC-TTTGCCTGACATTCTCAACGGTGTCACTGGGCTTAACCTCAAGGGTGATG 17280154 Query 225679 GTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || ||||| || || |||| | ||| | ||||||| Sbjct 17280153 GTTTTGCCAGTTAAGATTTTCAGGAAGATTTGCATT 17280118 >seq11 Length=87554214 Score = 100 bits (110), Expect = 7e-16 Identities = 143/200 (72%), Gaps = 1/200 (1%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || ||||| || ||||| ||||| |||| ||||| || | || || Sbjct 46295926 ACGCAGGCGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCCGACAGGGT 46295867 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || | || || ||||| || || |||| || || | || ||||| ||||| || || Sbjct 46295866 GCTGCTGTCCTCCAGCTGTTTGCCCACGAAAATCAGACACTGCTGGTCAGGCGGGATGCC 46295807 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||||||||| || ||| |||||| |||| || || || || | Sbjct 46295806 CTCCTTGTCTTGGATCTTGGCTTTGACATTCTCGATGATGTC-CTGGGCTCGACCTCGAG 46295748 Query 225672 CGTGATCGTCTTGCCCGTCA 225691 | ||| ||||||||||||| Sbjct 46295747 GGCGATGGTCTTGCCCGTCA 46295728 >seq14 Length=163896628 Score = 95.1 bits (104), Expect = 3e-14 Identities = 96/124 (77%), Gaps = 1/124 (1%) Strand=Plus/Minus Query 225505 ACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCT 225564 ||||| || |||||||||||||| |||| ||||| || | || || |||||||| Sbjct 161574191 ACAAG-TGCAGAGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGTGTCCATCTTCC 161574133 Query 225565 AGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGG 225624 |||||||||| || ||||| | | || ||||| || || || ||||||||||||||| Sbjct 161574132 AGCTGCTTCCTGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCTTGG 161574073 Query 225625 ATCT 225628 |||| Sbjct 161574072 ATCT 161574069 >seq110 Length=1165285 Score = 93.3 bits (102), Expect = 1e-13 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 225523 TCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAG 225582 || ||||| | ||||||| | |||||| |||||||| | ||||| ||||| ||| Sbjct 970088 TCCTTTTGAATGCTGTAATCAGATGCAGTTCTTCCATCTTCCCGTTGCTTGCCAGCAAAG 970147 Query 225583 ATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCT 225642 || | | ||| || || || ||||| || ||| | |||||||||| ||| ||| | Sbjct 970148 ATCAATATTTGCTGATCAGGAGGAATTCCATCCGTATCTTGGATCTCAACCTTTACATTT 970207 Query 225643 TCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATG 225702 || | || || |||| ||| | || | | ||| ||||| ||||| | ||||||||| Sbjct 970208 TCTTTTGTATCCGAGGGTTCAAGCTCAAGTGAGATGGTCTTCCCCGTAATGGTTTTTATG 970267 Query 225703 AACACTTGCATTTT 225716 || | ||||| || Sbjct 970268 AAAATCTGCATCTT 970281 >seq9 Length=116251907 Score = 93.3 bits (102), Expect = 1e-13 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 225523 TCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAG 225582 || ||||| | ||||| || | |||||| |||||||| ||||| ||||| || Sbjct 47674486 TCCTTTTGAATGTTGTAGTCAGATGCAGTTCTTCCATCTTCCCATTGCTTGCCAGCAAAA 47674545 Query 225583 ATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCT 225642 || | | ||| || || || ||||| || ||||| |||||||||| ||| ||| | Sbjct 47674546 ATCAATATTTGCTGATCAGGAGGAATTCCATCCTTATCTTGGATCTCAACCTTTACATTT 47674605 Query 225643 TCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATG 225702 || | || || |||| ||| | || | | ||| ||||| ||||| | |||||||||| Sbjct 47674606 TCTTTTGTATCCGAGGGTTCAAGTTCAAGTGAGATGGTCTTCCCCGTAACAGTTTTTATG 47674665 Query 225703 AACACTTGCATTTT 225716 || | ||||| || Sbjct 47674666 AAAATCTGCATCTT 47674679 Score = 89.7 bits (98), Expect = 1e-12 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 4465 ATTGTGAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACA 4524 |||||| ||| || |||||||| || || || ||||| || || || |||||||| ||| Sbjct 87505030 ATTGTGCATACCTGTCCATCAGTGATGGAAATGACATTGGTTGGAATGTAAGCAGACACA 87505089 Query 4525 TCACCTGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578 || || || |||||||| | || ||||| || || | || |||||||||||| Sbjct 87505090 TCCCCAGCCTGTGTTTCTATGACTGGTAACGCAGTCAAGGAGCCACCACCAAAA 87505143 >seq3241 Length=17245 Score = 91.5 bits (100), Expect = 4e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727 ||| ||| || || || ||||||||||||| ||||| || |||||||| || ||||| | Sbjct 6083 ATACTTCGGGGTGCCCGAAAAATCAGAATAGGTGTTGGTAGAGGATAGGGTCTCCTCCTC 6024 Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAA 370772 ||| |||||||| ||| | ||||| || |||| || ||||||| Sbjct 6023 CTGCAGGATCAAAGAAGGTTGTATTTAAGTTTCGGTCTGTTAAAA 5979 Score = 84.2 bits (92), Expect = 5e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611 ||| | || || || || | || || ||||||||||| || || |||||| | || ||| Sbjct 5507 CAAATCTATAATGTAATCGTCACCGCACATGCCTTTGTAATAATCTTCTTTATAGTCATG 5566 Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671 || |||| || || || ||||| || || | || || | || ||||| |||||||| Sbjct 5567 CCTATTATAATTGGAGGCTTCGGGAACTGGCTTGTCCCCCTGATAATTGGGGCTCCTGAC 5626 Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCT 7730 || || || || | | || ||||| || || ||| | || || ||||| || |||| Sbjct 5627 ATAGCCTTCCCCCGAATAAATAATATGAGCTTCTGACTTCTCCCCCCTTCATTCCTTCT 5685 >seq1 Length=194850757 Score = 87.8 bits (96), Expect = 4e-12 Identities = 149/215 (69%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||| ||| || ||||| ||||| |||| || ||||| | | ||| | |||| Sbjct 134277696 AGGACAAAGTGCAG-GTGGACTCTTTCTGGATGTTATAATCAGAAAGAGTGTGGCTATCT 134277754 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 | |||||||| || || || || || | | ||||| || || || |||| ||| ||| Sbjct 134277755 TTCAGCTGCTTGCCTGCAAAAATGAGCCTCTCCTGGTCAGGAGGGATGCCTTTCTTATCT 134277814 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| | | ||| || ||| || | || ||||| || ||||| ||| Sbjct 134277815 TGGATCTTGGCCATGACATTCTCCATGATGCCATTGGGCTCCACCTCCTGGGTGATGGTC 134277874 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| |||| || || | ||| | |||||| || Sbjct 134277875 TTGCCAGTCAGGGTCTTCACGAAGATTTGCATCTT 134277909 >seq121 Length=1052913 Score = 84.2 bits (92), Expect = 5e-11 Identities = 152/223 (68%), Gaps = 11/223 (5%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| ||||| || |||| || | |||| ||||| ||| | || | ||||| Sbjct 436999 CAGGACCAGGTGCAGGGTGGGCTCCGTCTGGAGGTTGTAGCTGGC-AGGGTGCGGCCATC 437057 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCG----------GGCGGAATAC 225610 ||| |||||||| || || ||||| || | || |||| | || || || | Sbjct 437058 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTTGTGTGTGTGTGGGGGGGATGC 437117 Query 225611 CTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670 | |||||||| |||||||| || || |||||||||| | || ||||| || | Sbjct 437118 CCTCCTTGTCCTGGATCTTCGCCTCGACGTTCGCGATGGTGTCAGCGGGCTCCACCTCGA 437177 Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||| ||||||||||| || ||||| | ||| | ||||| Sbjct 437178 GGGTGACGGTCTTGCCCGTTAAGGTTTTCACGAAGATCTGCAT 437220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192481679769254