Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctolagus_20cuniculus_20[refseq_20GCF_5F000003625.3_202009-10-20] 3,241 sequences; 2,737,462,810 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq11 161 2e-34 seq19 152 1e-31 seq188 149 1e-30 seq7 145 2e-29 seq14 127 4e-24 seq13 120 6e-22 seq2 104 5e-17 seq9 102 2e-16 seq4 98.7 2e-15 seq2643 89.7 1e-12 seq71 89.7 1e-12 seq110 87.8 4e-12 seq1 86.0 1e-11 seq37 84.2 5e-11 seq15 84.2 5e-11 >seq11 Length=87554214 Score = 161 bits (178), Expect = 2e-34 Identities = 172/226 (76%), Gaps = 1/226 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||||||||| || ||||| || | ||| ||||| |||||||||||||| | Sbjct 46295931 CCGCCACGCAGGCGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCCGAC 46295872 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||| || ||||| || ||||| || | || |||| || || |||||| ||| Sbjct 46295871 AGGGTGCTGCTGTCCTCCAGCTGTTTGCCCACGAAAATCAGACACTGCTGGTCAGGCGGG 46295812 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || |||||||||||||||||||| ||||| || | ||||| ||||| || ||||| Sbjct 46295811 ATGCCCTCCTTGTCTTGGATCTTGGCTTTGACATTCTCGATGATGTCCTGGGC-TCGACC 46295753 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCA 283098 ||||| | ||| ||||| ||||||| ||||| || || ||||||| Sbjct 46295752 TCGAGGGCGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCA 46295707 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 84215784 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 84215726 >seq19 Length=57279966 Score = 152 bits (168), Expect = 1e-31 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | ||| || || |||||||| | ||| ||||| |||||||||||||||| | Sbjct 4088710 CCACCCCTCAGACGGAGGACCAGATGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAA 4088651 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||||||||| || || || || ||||| ||||| | | || |||||| ||| Sbjct 4088650 AGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCAGGAGGA 4088591 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||| || |||||||| || || ||| | ||||| ||||| | || || Sbjct 4088590 ATGCCTTCCTTATCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 4088531 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 4088530 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 4088484 Score = 150 bits (166), Expect = 4e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | ||| || || ||||| || | ||| ||||| |||||||||||||||| Sbjct 4088255 ACCACCTCTCAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGA 4088196 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||||||||| || || || || ||||| ||||| | | || ||||| || Sbjct 4088195 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCGGGAGG 4088136 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || ||||| || |||||||| || || ||| | ||||| ||||| | || || Sbjct 4088135 AATGCCTTCCTTATCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCAC 4088076 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| ||||| || || | ||||| ||||| |||||||| Sbjct 4088075 CTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 4088028 Score = 145 bits (160), Expect = 2e-29 Identities = 176/240 (73%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | ||| || || ||||| || | ||| ||||| |||||||||||||||| Sbjct 4088027 ACCACCTCTCAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGA 4087968 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||||||||| || || || || ||||| ||||| | | || ||||| || Sbjct 4087967 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCGGGAGG 4087908 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || ||||| || |||||||| || || || | ||||| ||||| | || || Sbjct 4087907 AATGCCTTCCTTATCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCGCTGGGCTCCAC 4087848 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTCATATACAA 283111 || | ||||| ||||| || |||| ||||| ||||| ||||||||| | | ||||| Sbjct 4087847 CTCCAAGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATTGTGACCTACAA 4087788 Score = 145 bits (160), Expect = 2e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | ||| || || ||||| || | ||| ||||| |||||||||||||||| Sbjct 4088483 ACCACCTCTCAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGA 4088424 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||||||||| || || || || || |||||||| | | || |||||| || Sbjct 4088423 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGG 4088364 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || ||||| || |||||||| || || || | ||||| ||||| | || || Sbjct 4088363 AATGCCTTCCTTATCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCGCTGGGCTCCAC 4088304 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 4088303 CTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 4088256 Score = 98.7 bits (108), Expect = 2e-15 Identities = 137/191 (72%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||| ||||||||||||| | || | ||||| || ||||| || || |||||| Sbjct 43334528 TCCTTTTGAATGTTGTAGTCAGATAAAGTCTGTCCATCTTCCAGTTGCTTGCCAGCAAAG 43334469 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||| | ||| || ||| ||||| || ||||| || ||||| || || ||| | | Sbjct 43334468 ATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTGGCCTTTGCATTT 43334409 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || || | ||| | ||| || | ||| | ||| || || ||| | || || || ||| Sbjct 43334408 TCTATTGTAT-CGAGGGTTCAACCTTGAGTGCGATGGTGTTCCCCATAAAGGTTTTTACG 43334350 Query 283089 AATATCTGCAT 283099 || ||||| || Sbjct 43334349 AAGATCTGTAT 43334339 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 11049516 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 11049574 Score = 84.2 bits (92), Expect = 5e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 273780 GTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCTTGCAGCCTCGAACCAAACTGA 273839 ||||| ||||| | | ||| ||| ||||||||||| |||||||| | |||||||||| Sbjct 41553593 GTGAAGATGTATCGAGGACTAGCAGAATCCTTGCCACCATGCAGCCTGGTACCAAACTGA 41553652 Query 273840 CCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAATCCTGAGCCATATT 273895 || |||| ||| ||| | ||| |||||||| || ||| |||||||| ||| Sbjct 41553653 CCAATGGGCTGTAAGAGGTTCAGGTTATTGCTACCCACAAAATTCTGAGCCAAATT 41553708 >seq188 Length=611413 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | ||||| || ||||| || | ||| || || |||||||||||||| | Sbjct 73885 CCACCTCTGAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 73944 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| || || || || || ||||||||||||| | || ||||| || Sbjct 73945 AGGGTGCGGCCGTCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGG 74004 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| || || ||| | ||||| ||||| | || || Sbjct 74005 ATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 74064 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || |||| ||||| ||||| |||||||| Sbjct 74065 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 74111 Score = 147 bits (162), Expect = 5e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | ||||| || ||||| || | ||| || || |||||||||||||| | Sbjct 74113 CCACCTCTGAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 74172 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| || || || || || ||||||||||||| | || ||||| || Sbjct 74173 AGGGTGCGGCCGTCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGG 74232 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| ||||||||||| || || | ||||| ||||| | || || Sbjct 74233 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACC 74292 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103 ||||| ||||| ||||| || || || || || ||||| ||||||||| || Sbjct 74293 TCGAGGGTGATGGTCTTGCCAGTTAAGGTTTTCACGAAGATCTGCATTGTC 74343 Score = 136 bits (150), Expect = 8e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || | ||| || || |||| || | ||| || || |||||||||||||| | Sbjct 73656 ACCTCCCCTCAGACGCAGGACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 73715 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||||||||| || || || || |||||||| |||| | || ||||| || Sbjct 73716 CAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAATATCAGCCTCTGCTGGTCGGGGGG 73775 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| || || || | ||||| ||||| | || || Sbjct 73776 GATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCAC 73835 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || |||| ||||| ||||| |||||||| Sbjct 73836 CTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 73883 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 80737 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 80679 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 84885 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 84827 >seq7 Length=173684459 Score = 145 bits (160), Expect = 2e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || | ||| || || |||| || | ||| || || |||||||||||||| | Sbjct 24645100 ACCTCCCCTCAGACGCAGGACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 24645041 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||||||||| || || ||||| | ||||||||||| | || |||||| || Sbjct 24645040 CAGGGTGCGGCCATCTTCCAGCTGTTTGCTGGCAAAGATCAGCCTCTGCTGGTCAGGGGG 24644981 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| || || || | ||||| ||||| | || || Sbjct 24644980 GATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCAC 24644921 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || |||| ||||| ||||| |||||||| Sbjct 24644920 CTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 24644873 Score = 125 bits (138), Expect = 1e-23 Identities = 143/191 (75%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||| ||||||||||||| | || | ||||| || ||||| || || ||||| Sbjct 2561129 TCCTTTTGAATGTTGTAGTCAGATAAAGTCCATCCATCTTCCAGTTGCTTGCCAGCAAAA 2561188 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||| | ||| || ||| ||||| || ||||| || ||||| || |||||||| | Sbjct 2561189 ATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTGGCTTTTACATTT 2561248 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || || ||||| | ||| || ||||| ||||| ||||| ||||| | || || ||| Sbjct 2561249 TCTATTGTATCCGAGGGTTCAACCTCGAGCGTGATGGTCTT-CCCGTAAGGGTTTTCACG 2561307 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 2561308 AAGATCTGCAT 2561318 >seq14 Length=163896628 Score = 127 bits (140), Expect = 4e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || | ||| || || |||| || | ||| ||||| ||||||||||||| | Sbjct 150521851 ACCTCCCCTCAGACGCAGGACCAAGTGCAGAGTGGACTCTTTCGGGATGTTGTAGTCGGA 150521910 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| ||||| || || || || || |||||||||| | || |||| | || Sbjct 150521911 CAGGGTGCGTCCATCTTCCAGGTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTAAGGGGG 150521970 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 | ||||||||||| |||||||| || || ||| | | ||| ||||| | || || Sbjct 150521971 CGTGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTCTAGATGGTGTCACTGGGCTCCAC 150522030 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || |||| ||||| ||||| |||||||| Sbjct 150522031 CTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 150522078 Score = 98.7 bits (108), Expect = 2e-15 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 |||||| |||||||||||||||| || ||| | ||||| || || || |||| |||||| Sbjct 161574175 TTCTTTCTGGATGTTGTAGTCAGACAGGGTGTGTCCATCTTCCAGCTGCTTCCTGGCAAA 161574116 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCT 283014 |||||| | || |||||| || || || |||||||||||||||| Sbjct 161574115 GATCAACCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCTTGGATCT 161574069 >seq13 Length=143360832 Score = 120 bits (132), Expect = 6e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||| ||||||||||||| | || || ||||| || ||||| || || ||||| Sbjct 88039068 TCCTTTTGAATGTTGTAGTCAGATAAAGTCCGTCCATCTTCCAGTTGCTTGCCAGCAAAA 88039009 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||| | ||| || ||| ||||| || ||||| || ||||| ||||||||||| | Sbjct 88039008 ATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATTTTTGCTTTTACATTT 88038949 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || || ||||| | ||| || | ||| |||| ||||| ||| | | || || | | Sbjct 88038948 TCTATTGTATCCGAGGGTTCAACCTTGAGCATGATGGTCTTCCCCATAAGGGTTTTCATG 88038889 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 88038888 AAGATCTGCAT 88038878 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 31475231 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 31475173 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 31482302 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 31482244 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 31499063 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 31499005 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 31504367 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 31504309 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 31509690 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 31509632 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 31514966 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 31514908 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 31520229 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 31520171 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 31530789 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 31530731 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 31538676 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 31538618 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 31581271 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 31581329 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 31589489 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 31589547 Score = 84.2 bits (92), Expect = 5e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| |||| |||||||||||||||||||| ||||||||| Sbjct 31585750 TTAGTATAGTGGTGAGTATCCCCGCCTATCACGCAGGAGACCGGGGTTTGATTCCCCGA 31585808 >seq2 Length=174332312 Score = 104 bits (114), Expect = 5e-17 Identities = 142/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | ||| || || || || || || || ||||| |||||||||||||||| | Sbjct 24775740 CCACCTCTCAGACGCAGGACAAGGTGCAAGGTAGACTCTTTCTGGATGTTGTAGTCAGAA 24775681 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || |||||||| || || || || || || ||||| | | || |||||| ||| Sbjct 24775680 AGAGTACGGCCATCTTCCAGCTGCTTGCCAGCGAAGATGAGCCTCTGCTGGTCAGGAGGA 24775621 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGAC 283051 || || ||||| || |||||||| || || | | ||||| |||| || ||| || || Sbjct 24775620 ATGCCTTCCTTATCCTGGATCTTGGCCTTGAGATTGTCGATGGTGT-CGCTGCTCTCCAC 24775562 Query 283052 TTCGAGAGTGATCGTC 283067 | ||| ||||| ||| Sbjct 24775561 CTAGAGGGTGATGGTC 24775546 >seq9 Length=116251907 Score = 102 bits (112), Expect = 2e-16 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGC-GTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 || ||||| ||||||||||||| | || || | ||||| || ||| || || ||||| Sbjct 47674486 TCCTTTTGAATGTTGTAGTCAG-ATGCAGTTCTTCCATCTTCCCATTGCTTGCCAGCAAA 47674544 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| ||| || ||| ||||| || ||||| |||||||||| | ||||| | Sbjct 47674545 AATCAATATTTGCTGATCAGGAGGAATTCCATCCTTATCTTGGATCTCAACCTTTACATT 47674604 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || | || ||||| | ||| | ||| || | ||| ||||| ||||| | ||| || | Sbjct 47674605 TTCTTTTGTATCCGAGGGTTCAAGTTCAAGTGAGATGGTCTTCCCCGTAACAGTTTTTAT 47674664 Query 283088 GAATATCTGCATTTT 283102 ||| |||||||| || Sbjct 47674665 GAAAATCTGCATCTT 47674679 >seq4 Length=91394100 Score = 98.7 bits (108), Expect = 2e-15 Identities = 57/59 (97%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct 77807318 TTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCGA 77807376 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 75242040 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 75242098 >seq2643 Length=6801 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 2175 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 2117 >seq71 Length=2041368 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 516651 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 516709 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 522470 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 522528 >seq110 Length=1165285 Score = 87.8 bits (96), Expect = 4e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGC-GTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 || ||||| ||| |||| |||| | || || | ||||| || |||| || || ||||| Sbjct 970088 TCCTTTTGAATGCTGTAATCAG-ATGCAGTTCTTCCATCTTCCCGTTGCTTGCCAGCAAA 970146 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| ||| || ||| ||||| || ||| | |||||||||| | ||||| | Sbjct 970147 GATCAATATTTGCTGATCAGGAGGAATTCCATCCGTATCTTGGATCTCAACCTTTACATT 970206 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || | || ||||| | ||| | || || | ||| ||||| ||||| | || || | Sbjct 970207 TTCTTTTGTATCCGAGGGTTCAAGCTCAAGTGAGATGGTCTTCCCCGTAATGGTTTTTAT 970266 Query 283088 GAATATCTGCATTTT 283102 ||| |||||||| || Sbjct 970267 GAAAATCTGCATCTT 970281 >seq1 Length=194850757 Score = 86.0 bits (94), Expect = 1e-11 Identities = 160/230 (70%), Gaps = 10/230 (4%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || ||||| || | || | | ||| |||| |||||||||| | | Sbjct 37185355 CCACCTCGAAGGCGGAGCAGCATGTACAGGGTGGCCTCTTCCTGGATGTTGT---CTGAT 37185411 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || | |||||||||||| || ||||| | ||||| |||| | || || || ||| Sbjct 37185412 AGAGCGCGGCCATCCTCCAGCTGTTTGTCTGCAAATATCAGCCTCTGCTGCTCGGGCGGG 37185471 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTC-CGAAGCTTCGAC 283051 || |||||||||||| |||| || ||||| || | ||||| || || | |||| | | Sbjct 37185472 ATGCCCTCCTTGTCTCGGATTTTGGCTTTGACATTCTCGATGGTTTCTCTGGGCTTAG-C 37185530 Query 283052 TTC--GAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | | || |||| ||| | ||||||| ||||| || || |||||||| Sbjct 37185531 TCCAGGATAGTG---GTCATTCCCGTCAGGGTCTTCACAAAGATCTGCAT 37185577 >seq37 Length=4375787 Score = 84.2 bits (92), Expect = 5e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||| ||||||| ||||||||| Sbjct 401223 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACTGGGGTTCGATTCCCCGA 401165 >seq15 Length=109054052 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/194 (72%), Gaps = 5/194 (3%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 || || |||||||||||||||| |||| || | ||||| || || |||||||| | || Sbjct 17280308 TCCTTCTGGATGTTGTAGTCAGACAAG-GTACATCCATCTTCCAGGTGTTTCCCAGTGAA 17280250 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | || | ||||| | || || || ||||||||||||||||| | || | Sbjct 17280249 GATCAACCTTTTCTAGTCACAGGCGATGCCTTCTTTGTCTTGGATCTTTGC-CTGACATT 17280191 Query 283028 ATCGATAGTGTC-CGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086 || | ||||| | |||| || || || ||||| || || || || || | || | Sbjct 17280190 CTCAACGGTGTCACTGGGCTT-AACCTCAAGGGTGATGGTTTTGCCAGTTAAGATTTTCA 17280132 Query 283087 CGAATATCTGCATT 283100 ||| || |||||| Sbjct 17280131 GGAAGATTTGCATT 17280118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046695733827614