Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peromyscus_20maniculatus_20bairdii_20[refseq_20GCF_5F000500345.1_202
013-12-03] 30,921 sequences; 2,630,541,020 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq498 228 8e-55
seq1345 170 2e-37
seq6 141 1e-28
seq31 122 9e-23
seq37 118 1e-21
seq78 107 2e-18
seq70 98.7 1e-15
seq309 96.9 4e-15
seq184 96.9 4e-15
seq3 96.9 4e-15
seq4 95.1 1e-14
seq28 86.0 6e-12
seq366 84.2 2e-11
seq120 84.2 2e-11
>seq498
Length=2542268
Score = 228 bits (252), Expect = 8e-55
Identities = 524/781 (67%), Gaps = 31/781 (4%)
Strand=Plus/Minus
Query 116585 CTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGC 116644
||| | || ||||||| || ||| | || || ||||| |||||| || || |||| |
Sbjct 2187216 CTGAGAGAAAACCCCCAGCGCTTCATCATGTTTCCCATCAAATACCATGATATCTGGCAC 2187157
Query 116645 ATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGAC 116704
|||||||| || || ||||| || || || ||| | ||||| ||
Sbjct 2187156 ATGTACAAGAAAGCGGAGGCCTCCTTTTGAACCTT----------------TCCAAAGAT 2187113
Query 116705 A-CGAGCGACTGGG-AGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGG 116762
| | ||| |||||| ||| || ||| | | ||| | ||||| || ||||| | |
Sbjct 2187112 ATCCAGC-ACTGGGGAGCTCTGAAAC--CCAGGAGAGACATTTTATACCTCACGTTCGTG 2187056
Query 116763 CCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG-TTTCGCTCAG 116821
| || ||||| || || ||| |||| ||||| ||||| ||| |||| ||| || ||
Sbjct 2187055 CTTTCTTCGCAGCGAGTGACAGCATAGTCAATGAGAACTTGG---AGCGATTTAGC-CAA 2187000
Query 116822 GAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTG 116881
|| || || || | ||||| || || ||||| ||||| || || |||||||| ||| |
Sbjct 2186999 GAAGTTCAAGTCACAGAGGCCCGCTGTTTCTATGGCTTCCAAATTGCCATGGAAAACATA 2186940
Query 116882 CACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTC 116941
|| || |||||||| ||| || ||||| ||| | ||| |||||| |
Sbjct 2186939 CATTCTGAAATGTACAGTCTCCTTATTGACACCTACATTAAAGATTCTAAGGAGAGGGAG 2186880
Query 116942 CGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTG 117001
| | || | || || || |||||||| | || || |||||||||| ||||| ||
Sbjct 2186879 TATCTCTTCATTGCTATAGAAACGATGCCTTCTGTGAAGAAGAAGGCCGACTGGGCCTTG 2186820
Query 117002 CGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTC 117061
|| ||||| | || |||||| | | | | || || | || ||||| || |||||
Sbjct 2186819 CGTTGGATTTGGGACAAAGAGGCTACATACAGAGAACGTGTTGTCGCCTTTGCCGCCGTG 2186760
Query 117062 GAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTC 117121
|| ||| ||||||| || |||| | | ||||| ||||||||||| | || ||
Sbjct 2186759 GAAGGCATCTTCTTC---GGTTCTTTCACATCAATATTCTGGCTCAAGAAGCAGGGACTG 2186703
Query 117122 ATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGAC 117181
||||||||||| || || ||| ||||| ||| ||| |||||||| | || || |||
Sbjct 2186702 ATGCCCGGCCTTACATTTTCCAATGAGCTTATCAGCAGAGACGAGGGCTTACACTGTGAC 2186643
Query 117182 TTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGC-GCGCGTCAGGGA 117240
|||||||| || |||||||||| |||| || | | | | || || | | || | ||
Sbjct 2186642 TTTGCCTGCCTGATGTTCAAGCACCTGGTACA-CAAGCCATCGGAGCAGAGGGTAAAAGA 2186584
Query 117241 GATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCG 117300
|| | | |||| || || |||||| ||||| || || || |||| |||
Sbjct 2186583 AATAATTGTCAACGCAGTGAGGATAGAGCAGAAGTTCCTTACGGAGGCCTTGCCTGTGAA 2186524
Query 117301 TCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCT 117360
|| | || | || ||| |||| ||| ||||||||||| || || ||||||||
Sbjct 2186523 GCTCATCGGGATGAACTGCACTCTGATGAAGCAGTACATCGAGTTTGTGGCAGACAGGCT 2186464
Query 117361 G 117361
|
Sbjct 2186463 G 2186463
>seq1345
Length=786133
Score = 170 bits (188), Expect = 2e-37
Identities = 509/786 (65%), Gaps = 36/786 (5%)
Strand=Plus/Plus
Query 116591 GAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTAC 116650
|| ||||||| | | || || || || ||||| |||||| || || |||| ||||||
Sbjct 220350 GAAAACCCCCACTGCTTTGTCATCTTTCCCATCAAATACCATGATATCTGGCAGATGTAC 220409
Query 116651 AAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGC 116710
|| || | ||||| || || ||||| | |||||||||||||| |||||||| |
Sbjct 220410 AAGAAAGATGAGGCCTCCTTTTGGACGGCTGAGGAGGTGGACCTTTCCAAGGATATTCAG 220469
Query 116711 GACTGGGAGCGCT-TGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTT 116769
||||||| ||| |||| || ||| | ||| | || || || | ||| || ||
Sbjct 220470 TACTGGGAA-GCTCTGAAACCCAGTGAGAGACATGTTATACCTCATGTTCGGGCTTTCTT 220528
Query 116770 CGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCA 116829
|| || || ||| |||| ||||| ||||| |||| | | ||| || || || ||
Sbjct 220529 TGCAGCAAGTGACAGCATAGTCAATGAGAACTTGGTGAAACTATTCAGCCAAGAAGTTCA 220588
Query 116830 GGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGA 116889
|| | |||| || || ||||| ||||| || || | ||| || || | || || ||
Sbjct 220589 AGTCACAGAGGTCCGCTGTTTCTATGGCTTCCAAATTGGCATAGAAAATATACATTCTGA 220648
Query 116890 AATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGTTTGTT 116949
|||||| ||| || ||||| | | ||| |||||| | | | ||
Sbjct 220649 AATGTACAGTCTCCTTATTGACACATTAAAGA----TTCCAAGGAGAGGGAGTATCTCTT 220704
Query 116950 GAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGAT 117009
|| || || || | |||||| ||||| ||| ||||
Sbjct 220705 CAATGCTATTGAAAAGATGCCTTGCGT-----------------------TGCACTGGG- 220740
Query 117010 CGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGT 117069
| || || ||| | | || || | | |||||||| || ||||| || ||| |
Sbjct 220741 ----GACAAAGGGGCTACATATGGAGAATGTGTTGTGGCCTTTGCCGCCGTGGAAGGCAT 220796
Query 117070 CTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGG 117129
||||||||| || ||| || | ||||| ||||| ||||| || || || ||||||||
Sbjct 220797 CTTCTTTTCTGGTTCTTTTGCATCAATATTCTGGCTGAAGAAGCGGGGACTTATGCCCGG 220856
Query 117130 CCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTG 117189
||| || || ||| ||||| ||| ||| || ||||| | ||||| |||||||||||
Sbjct 220857 CCTTACATTTTCCAATGAGCTTATCAGCAGAGATGAGGGCTTACATTGTGACTTTGCCTG 220916
Query 117190 TTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGC-GCGCGTCAGGGAGATCGTCA 117248
|| |||||||||| |||| || | | | | | || | | || || | || | |
Sbjct 220917 CCTGATGTTCAAGCACCTGGTACA-CAAGCCATAGGAGCAGAGAGTAAGTAAAATAATTA 220975
Query 117249 CCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGCTGG 117308
| || | || |||||| |||||||| || || |||| ||| || | |
Sbjct 220976 TGAATGCCATGAGGATAGAGCAGGAGTTCCTCACGGAGGCCTTGCCTGTGAAGCTTATCG 221035
Query 117309 GACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCG 117368
| | || || | |||| ||| ||||| || || || | ||||||||| |||| |
Sbjct 221036 GGATGAACCGCAATCTGATGAAGCAGTACATTGAATTTGTGGTGGACAGGCTGATGCTGG 221095
Query 117369 AGCTGG 117374
||||||
Sbjct 221096 AGCTGG 221101
>seq6
Length=12818899
Score = 141 bits (156), Expect = 1e-28
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
|||||| || ||||| ||||| | || || || ||||||||| | || ||||| |||
Sbjct 2580275 AATGCAGATCTTCGTGAAAACCTTAACTGGTAAGACCATCACCCTAGAGGTCGAGCCCAG 2580334
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | | |||||| ||| || | ||||||||||| |||||| | |||||
Sbjct 2580335 TGACACCATCGAGAATGTCAAGGCAAAGATCCAGGACAAAGAGGGTATCCCCCCTGACCA 2580394
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | || |||| || ||||| |||||||| || | |||||||| ||||||||
Sbjct 2580395 GCAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAA 2580454
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||||||| ||| |||| ||||| || || | || | ||||| ||
Sbjct 2580455 CATCCAGAAAGAGTCCACTCTGCACCTGGTCCTCCGTCTCAGGGGTGG 2580502
>seq31
Length=11202321
Score = 122 bits (134), Expect = 9e-23
Identities = 108/135 (80%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
|| ||||||||||||||| | |||||||| |||||||||| || ||||| ||||||||
Sbjct 8040074 GATAAAGAGGGCATCCCCCCAGACCAGCAGCGACTCATCTTTGCCGGCAAGCAGCTGGAA 8040015
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|| | |||||| || ||||||||||||||||| ||| |||| ||||| || || |
Sbjct 8040014 GATGGGCGCACTCTTTCTGACTACAACATCCAGAAAGAGTCCACCCTGCACCTGGTCCTC 8039955
Query 40903 CGCTTGAGGGGCGGC 40917
|| ||||||| |||
Sbjct 8039954 CGTCTGAGGGGTGGC 8039940
Score = 118 bits (130), Expect = 1e-21
Identities = 128/170 (75%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|||||||| || ||||| || || || || ||||| ||||||||| | || || || ||
Sbjct 8041143 AAAATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCC 8041084
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| |||| | | | | |||||| || || | || ||||||||||||||| | |||
Sbjct 8041083 AGTGACACCATCGAGAATGTCAAGGCCAAGATCCAGGATAAAGAGGGCATCCCCCCTGAC 8041024
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCT 40856
||||| |||||||||| || ||||| |||||||| || | ||||||||
Sbjct 8041023 CAGCAGCGACTCATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCT 8040974
Score = 82.4 bits (90), Expect = 8e-11
Identities = 98/133 (74%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 40766 TCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACG 40825
|||||| || || | || ||||||||||| || | |||||||| | |||||||| |
Sbjct 7312508 TCAAGGCCAAGATCCAAGATAAAGAGGGCATGCCTCCCGACCAGCAGCAACTCATCTTTG 7312567
Query 40826 CGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCA 40885
| |||| |||||| | || | | ||| || ||||||||||||||||| ||| | |
Sbjct 7312568 CCAGCAAGCAGCTGAAAGATGGCCCCACTCTTTTTGACTACAACATCCAGAAAGAGTCTA 7312627
Query 40886 CGCTGCATCTAGT 40898
| ||||| || ||
Sbjct 7312628 CCCTGCACCTGGT 7312640
>seq37
Length=11501336
Score = 118 bits (130), Expect = 1e-21
Identities = 165/231 (71%), Gaps = 3/231 (1%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
||||||||||| ||||| || || || || |||| ||||||||| | || || || |
Sbjct 11476887 AAAATGCAAATCTTCGTGAAGACCCTGACCAGCAAGACCATCACCCTAGAGGTGGAGCCT 11476828
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| || | | | | | |||||| || || | || |||||||||||| | | |||
Sbjct 11476827 AGTGATACCATCGAGAATGTCAAGGCCAAGATCCAGGATGAAGAGGGCATCCTCCCTGAC 11476768
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
|||||||||||||||| ||||||| |||||||| || | ||||| || ||||
Sbjct 11476767 CAGCAACGACTCATCTTTTCGGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACT-- 11476710
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||||| | | |||| ||||| || || | | ||||||| |||
Sbjct 11476709 -ACATCCAGAAAGGGTCCACCCTGCACCTGGTCCTCTGTCTGAGGGGTGGC 11476660
>seq78
Length=6419775
Score = 107 bits (118), Expect = 2e-18
Identities = 98/124 (79%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 117044 GTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGG 117103
||||||||||| ||||| || ||| ||||||| || || |||||| ||||||| |||
Sbjct 5585684 GTGGCCTTCGCCGCCGTGGAAGGCATCTTCTTCTCTGGTTCTTTCGCATCCATATTCTGG 5585625
Query 117104 CTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGAC 117163
|||||||| || || || ||||||||||| || || ||| ||||| ||| ||| |||
Sbjct 5585624 CTCAAGAAGCGGGGACTGATGCCCGGCCTTACATTTTCCAATGAGCTTATCAGCAGAGAC 5585565
Query 117164 GAGG 117167
||||
Sbjct 5585564 GAGG 5585561
>seq70
Length=7483708
Score = 98.7 bits (108), Expect = 1e-15
Identities = 155/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || || || || || || |||||||| |||||||| | || ||||| |
Sbjct 5585921 AACATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACTCTTGAGGTCGAGCCT 5585862
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| |||| | | | | |||||| || || | ||||| || | |||||| | |||
Sbjct 5585861 AGTGACACCATTGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGACATCCCACCAGAC 5585802
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| || || | || |||||||||||||| || | |||||| || ||
Sbjct 5585801 CAGCAGAAGCTGATATTTGCTGGCAAACAGCTGGAGGATCGCCTCACCCTGTCAGATTAA 5585742
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTG 40908
||||||||||| ||| |||| |||| || ||| ||||| ||
Sbjct 5585741 AACATCCAGAAAGAGTCCACCTTGCACCTGGTGCTGCGCCTG 5585700
>seq309
Length=1536079
Score = 96.9 bits (106), Expect = 4e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || |||||||| ||||||||||| |||| || ||| || |
Sbjct 714607 ATGCAGATTTTCGTGAAGACCCTCACGGGGAAAACCATCACGCTCGAGGTTGAACCCTCG 714666
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | ||| | |||| || || | || || || || || || | || |||
Sbjct 714667 GACACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGTATTCCTCCTGATCAG 714726
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | || |||| ||| || || |||||||| || | || || | || |||||
Sbjct 714727 CAGAGGCTGATCTTCGCTGGTAAGCAGCTGGAAGATGGCCGTACTTTGTCTGAATACAAT 714786
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|| || |||||| |||| || ||||| ||||||
Sbjct 714787 ATTCAAAAGGAGTCCACCCTTCATCTTGTGTTG 714819
Score = 95.1 bits (104), Expect = 1e-14
Identities = 149/213 (70%), Gaps = 4/213 (2%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || |||||||| ||||||||||| |||| || ||| || |
Sbjct 713245 ATGCAGATTTTCGTGAAGACCCTCACGGGGAAAACCATCACGCTCGAGGTTGAACCCTCG 713304
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | ||| | |||| || || | || || || || || || | || |||
Sbjct 713305 GACACGATAGAAAATATAAAGGCCAAGATCCAGGATAAGGAAGGTATTCCTCCTGATCAG 713364
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||| | || |||| || || || |||||||| || | || || | || |||||
Sbjct 713365 CAAAGGCTGATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGTACTTT----GAATACAAT 713420
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|| || |||||| |||| || ||||| ||||||
Sbjct 713421 ATTCAAAAGGAGTCCACCCTTCATCTTGTGTTG 713453
>seq184
Length=3314118
Score = 96.9 bits (106), Expect = 4e-15
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101
||||||||||||| ||||| || ||| | ||||| || || || || || ||||| |
Sbjct 1994201 TGGTGGCCTTCGCCGCCGTGGAAGGCATTTTCTTCTCTGGGTCATTTGCTGCTATATTCT 1994142
Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161
|||| ||||| | |||||||||||||| || ||||| || ||||||||| |||||
Sbjct 1994141 GGCTGAAGAAGAGAGGCCTCATGCCCGGACTCACTTTTTCAAATGAGCTCATCAGCAGGG 1994082
Query 117162 ACGAGG 117167
| ||||
Sbjct 1994081 ATGAGG 1994076
Score = 82.4 bits (90), Expect = 8e-11
Identities = 74/93 (80%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 116803 GGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCA 116862
||| ||||||||| ||||||||||||||| | ||||| || || ||||| ||||||||
Sbjct 1999473 GGTGGAGCGTTTCAGTCAGGAGGTGCAGGTTCCAGAGGCCCGCTGTTTCTATGGCTTTCA 1999414
Query 116863 GATCGCCATGGAGAACGTGCACTCGGAAATGTA 116895
||| ||| ||||| || || || || |||||
Sbjct 1999413 GATTCTCATCGAGAATGTTCATTCAGAGATGTA 1999381
>seq3
Length=5748141
Score = 96.9 bits (106), Expect = 4e-15
Identities = 156/223 (70%), Gaps = 1/223 (0%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || || || || || || || ||||| | |||||| | || ||||| |
Sbjct 3927526 AACATGCAGATCTTTGTGAAGACCCTGACAGGCAAGAACATCACTCTAGAGGTCGAGCCT 3927467
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| |||| | | | | |||||| || || | || || || |||||||| | |||
Sbjct 3927466 AGTGACACCATCGAGAATGTCAAGGTCAAGATCCAAGATAAGGAAGGCATCCCACCAGAC 3927407
Query 40807 CAGCAACGACTCATC-TACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
||||| | || || | || |||| ||||||| || | |||||||| |||||
Sbjct 3927406 CAGCAGAGGCTGATAATTTGCCAGCAAGCAGCTGGGTGATGGCCGCACCCTGTCAGACTA 3927347
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTG 40908
|||||||||||| ||| |||| ||||| || ||| ||||| ||
Sbjct 3927346 CAACATCCAGAAAGAGTCCACCCTGCACCTGGTGCTGCGCCTG 3927304
>seq4
Length=18898765
Score = 95.1 bits (104), Expect = 1e-14
Identities = 149/211 (71%), Gaps = 3/211 (1%)
Strand=Plus/Minus
Query 40707 AACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCT 40766
||| || || ||||| ||||||||| | || | || | | |||| | | | | |
Sbjct 11612849 AACCCTGACTGGCAAGACCATCACCCTAGAGATGGAGCCTAGTGACACCATCGAGAATGT 11612790
Query 40767 CAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGC 40826
|||| || || | || ||||||||||||||| | |||||| | ||||||| | ||
Sbjct 11612789 GAAGGCCAAGATCCAAGATAAAGAGGGCATCCCC-CTGACCAGTAGTGACTCATTT--GC 11612733
Query 40827 GGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCAC 40886
|||| |||||||| || ||||| || ||||||||||||||||| ||| ||||
Sbjct 11612732 CAGCAAGCAGCTGGAAGATAGCCGCACTCTTTCTGACTACAACATCCAGAAAGAGTCCAC 11612673
Query 40887 GCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||| || || | || ||||||| |||
Sbjct 11612672 CCTGCACCTGGTCCTCCGTCTGAGGGGTGGC 11612642
>seq28
Length=9942386
Score = 86.0 bits (94), Expect = 6e-12
Identities = 159/231 (69%), Gaps = 3/231 (1%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || || || || || | |||| ||| |||||||| || | || || |
Sbjct 239381 AACATGCAGATCTTGGTGAAGACCTTGACGGACAAGACCATCAC--TCCAGGTGGAGCTC 239324
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| |||| | | | | |||||| || | | ||||| || ||||||| | ||
Sbjct 239323 AGTGACACCATCAAGAATGTCAAGGCCAAGACCCAAGACAAGGAAGGCATCCTACCTGAT 239264
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| | || || | || |||| |||||||| || | ||||||| |||||
Sbjct 239263 CAGCACAGGCTGATATTTGCCAGCAAGCAGCTGGA-GATGGCTGCACCCTGTCTGACTAT 239205
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||||||||| ||| |||| ||||| |||||| ||||| || | || |||
Sbjct 239204 AACATCCAGAAAGAGTCCACCCTGCACCTAGTGCTGCGCCTGCGTGGTGGC 239154
>seq366
Length=4409749
Score = 84.2 bits (92), Expect = 2e-11
Identities = 130/186 (70%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 40720 AAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAAAAAATT 40779
|| |||||||| | || ||||| ||| |||| | | | | |||||| || ||
Sbjct 1116403 AAGACCATCACTCTTGAGGTCGAGCCCAGTGACACCATTGAGAATGTCAAGGCCAAGATC 1116344
Query 40780 CTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTG 40839
| || || || |||||||| | |||||||| | || || | || || || ||||||
Sbjct 1116343 CAAGATAAGGAAGGCATCCCACCAGACCAGCAGAGGCTGATATTTGCCGGAAAGCAGCTG 1116284
Query 40840 GACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|| || | | |||||| ||||||||||||||||| ||| ||| |||| || |||
Sbjct 1116283 GAGGATGGCCACACCCTGTCGGACTACAACATCCAGAAAGAGTTCACCTTGCACCTGGTG 1116224
Query 40900 TTGCGC 40905
|||||
Sbjct 1116223 CTGCGC 1116218
>seq120
Length=4857412
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 40696 ATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGC 40755
|| ||||| || || || | |||||| |||||||| | || ||| | || |||| |
Sbjct 3874248 ATCTTCGTGAAGACCCTGAGGGGCAAGACCATCACTCTTGAGGTCTAGCTCAGTGACACC 3874307
Query 40756 GTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGA 40815
| | | |||||| || || | ||||| || ||||||| | |||||||| |
Sbjct 3874308 ATCAAGAATGTCAAGGCTAAGATCCAAGACAAGGAAGGCATCCTACCTGACCAGCAGAGG 3874367
Query 40816 CTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAG 40875
|| | | || ||||| |||||||| || | |||| || |||||||||||||||
Sbjct 3874368 CTGACATTTGCTGGCAAGCAGCTGGAGGATGGCGGCACTCTGTCGGACTACAACATCCAG 3874427
Query 40876 AAGGAGGCCACGCTGCATCTAGTG 40899
|| ||| ||| ||||||| |||
Sbjct 3874428 AAAGAGTCCATCTTGCATCTGGTG 3874451
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515020061338960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |