Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peromyscus_20maniculatus_20bairdii_20[refseq_20GCF_5F000500345.1_202
013-12-03] 30,921 sequences; 2,630,541,020 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq1345 260 2e-64
seq498 241 2e-58
seq657 125 9e-24
seq30 104 3e-17
seq442 100 4e-16
seq184 96.9 4e-15
seq78 95.1 2e-14
seq3761 91.5 2e-13
>seq1345
Length=786133
Score = 260 bits (288), Expect = 2e-64
Identities = 581/871 (67%), Gaps = 31/871 (4%)
Strand=Plus/Minus
Query 33293 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 33352
|||||| || ||||| | || || || || || || |||| ||| | ||| ||||||||
Sbjct 221205 TTGGTACTCGCCCACTGGCTTCTCAAAGAAGTTTGTCTTTCGTTCTAGTGAAATATTTTC 221146
Query 33353 CATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCAA 33412
|||||| ||||| | ||| || ||| |||| || ||||| |||| || ||||
Sbjct 221145 CATGAAGTCAAATGAATTTTCTACTTTGAAAATCTTGTTAAACCCCAGCTCCAGCATCAG 221086
Query 33413 TCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTTT 33472
|| || | || ||||| || || ||||||| | | ||||| || || || ||
Sbjct 221085 CCTGTCCACCACAAATTCAATGTACTGCTTCATCAGATTGCGGTTCATCCCGATAAGCTT 221026
Query 33473 AACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATAAA 33532
|| || | ||| | || || || || || || || | ||||| | || ||
Sbjct 221025 CACAGGCAAGGCCTCCGTGAGGAACTCCTGCTCTATCCTCATGGCATTCATAATTATTTT 220966
Query 33533 TCTAACGGTTT-CTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAAAT 33591
|| || | | || | | | | | |||| | || || ||||||| || || || |
Sbjct 220965 ACTTACTCTCTGCTCCTATGGCTTG-TGTACCAGGTGCTTGAACATCAGGCAGGCAAAGT 220907
Query 33592 CGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTA 33651
| || || | ||||| ||||| || || | || || ||||| || || |||||||| |
Sbjct 220906 CACAATGTAAGCCCTCATCTCTGCTGATAAGCTCATTGGAAAATGTAAGGCCGGGCATAA 220847
Query 33652 GGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTA 33711
| || ||||| || ||||| ||||| || || || || || ||||||||||| ||||| |
Sbjct 220846 GTCCCCGCTTCTTCAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCA 220787
Query 33712 CTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTATCCACTTTTGAG 33771
| || |||||||| | || | ||||||| ||||| || | ||||
Sbjct 220786 CGGCGGCAAAGGCCACAACACATTCTCCAT-------------ATGTAGCC-CCTTTGTC 220741
Query 33772 CCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttt 33831
|||| | || || ||||||||| |||| || ||||| |||||||| |
Sbjct 220740 CCCAGT--GC---------AACGCAAGGCATCTTTTCAATAGCATTGAAGAGATACTCCC 220692
Query 33832 tttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGT 33891
| || || ||||||| | || || || | ||||| |||||||| ||||| || |
Sbjct 220691 TCTCCTTGGAATCTTTA----ATGTGTCAATAAGGAGACTGTACATTTCAGAATGTATAT 220636
Query 33892 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTAC 33951
|||| ||| | || || || || |||||||| | |||| || | || |||||| |
Sbjct 220635 TTTCTATGCCAATTTGGAAGCCATAGAAACAGCGGACCTCTGTGACTTGAACTTCTTGGC 220576
Query 33952 AAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATA 34011
||| ||| | || || ||||| ||||| | ||||| |||||||| || ||| |
Sbjct 220575 TGAATAGTTTCACCAAGTTCTCATTGACTATGCTGTCACTTGCTGCAAAGAAAGCCCGAA 220516
Query 34012 CATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAG 34071
|||| ||||| || | | || ||| | || | ||| | | ||||| || |
Sbjct 220515 CATGAGGTATAACATGTCTCTCACTGGGTTTCAGAGCTTCCCAGTACTGAATATCCTTGG 220456
Query 34072 ATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGA 34131
| | ||||| || || | |||||||| || ||||| | || || ||||| | |||||
Sbjct 220455 AAAGGTCCACCTCCTCAGCCGTCCAAAAGGAGGCCTCATCTTTCTTGTACATCTGCCAGA 220396
Query 34132 TGTCATGATATTGGATTGGGAAAATAACAAA 34162
| ||||| |||| ||| || || || |||||
Sbjct 220395 TATCATGGTATTTGATGGGAAAGATGACAAA 220365
>seq498
Length=2542268
Score = 241 bits (266), Expect = 2e-58
Identities = 614/933 (66%), Gaps = 60/933 (6%)
Strand=Plus/Plus
Query 33230 GTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA----GACATAACTC 33285
|||| ||| || ||| |||| || | ||||| ||| ||| |||| ||||| || |
Sbjct 2186306 GTTTACTTAGAAATCAGCATCCAAGGTAAAATAATTCTCTG-TTGAACTCGACATCAC-C 2186363
Query 33286 CCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATA 33345
|||| | ||||| || || | || || || || || | || |||||||| | ||| |
Sbjct 2186364 CCATCCTCTGGTACTCGCCT-CTCGCTTCTCAAAGAAGCTGGTCTTTCCTTCTAGTGAAA 2186422
Query 33346 TATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAG 33405
||||||||||||| | ||| ||||| || ||| ||||
Sbjct 2186423 TATTTTCCATGAAGTGAAATGGATTCTCTACTTTGAAAAT-------------------- 2186462
Query 33406 AAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA 33465
|| || ||||| || || || || || ||||||| || ||||| || |
Sbjct 2186463 ----CAGCCTGTCTGCCACAAACTCGATGTACTGCTTCATCAGAGTGCAGTTCATCCCGA 2186518
Query 33466 TGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTA 33525
|||| || || || | ||| | ||||| || | || || || || || || |
Sbjct 2186519 TGAGCTTCACAGGCAAGGCCTCCGTAAGGAACTTCTGCTCTATCCTCACTGCGTTGACAA 2186578
Query 33526 TAATAAATCTAACGGTTT-CTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACAT 33584
| || | | || | | || | | | | | |||| | || || ||||||| ||
Sbjct 2186579 TTATTTCTTTTACCCTCTGCTCCGATGGCTTG-TGTACCAGGTGCTTGAACATCAGGCAG 2186637
Query 33585 GCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCG 33644
|| || || ||||| | ||||||||||| || || | || || ||||| || || |||
Sbjct 2186638 GCAAAGTCACAGTGTAAGCCCTCGTCTCTGCTGATAAGCTCATTGGAAAATGTAAGGCCG 2186697
Query 33645 GGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATT 33704
||||| || || |||| || ||||| ||||| || | ||| || ||| ||||||||
Sbjct 2186698 GGCATCAGTCCCTGCTTCTTGAGCCAGAATATTGATGTGAAAGAACCG---AAGAAGATG 2186754
Query 33705 CCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATC 33761
||||| || || |||||||| | || | |||| || | | | |||| |||
Sbjct 2186755 CCTTCCACGGCGGCAAAGGCGACAACACGTTCTCTGTATGTAGCCTCTTTGTCCCAAATC 2186814
Query 33762 CACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAG 33821
|| ||||| ||||||||||| || ||| |||||||||||||||| ||| | |||
Sbjct 2186815 CAACGCAAGGCCCAGTCGGCCTTCTTCTTCACAGAAGGCATCGTTTCTATAGCAATGAAG 2186874
Query 33822 AGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCC 33881
||||| | | || ||| |||||||| || || || || | ||||| ||||||||
Sbjct 2186875 AGATACTCCCTCTCCTTAGAATCTTTAATGTAGGTGTCAATAAGGAGACTGTACATTTCA 2186934
Query 33882 GAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGC 33941
||||| |||||||| ||||| || || || || |||||||| | ||||| || | ||
Sbjct 2186935 GAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCCTCTGTGACTTGA 2186994
Query 33942 ACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAA 34001
|||||| | |||||| | | || || ||||| ||||| | ||||| ||||| ||
Sbjct 2186995 ACTTCTTGGCTAAATCGCT---CCAAGTTCTCATTGACTATGCTGTCACTCGCTGCGAAG 2187051
Query 34002 AACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG 34061
|| || || || |||||||| | | || | ||| | || ||| | | |
Sbjct 2187052 AAAGCACGAACGTGAGGTATAAAATGTCTCTCCT-GGGTTTCAGAGCTCCCCAGTGCTGG 2187110
Query 34062 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 34121
|||||||| || | || ||||| || ||||| || || || |||
Sbjct 2187111 ATATCTTTGGA----------------AAGGTTCAAAAGGAGGCCTCCGCTTTCTTGTAC 2187154
Query 34122 ATATTCCAGATGTCATGATATTGGATTGGGAAA 34154
|| | |||||| ||||| |||| || |||||||
Sbjct 2187155 ATGTGCCAGATATCATGGTATTTGA-TGGGAAA 2187186
>seq657
Length=1571634
Score = 125 bits (138), Expect = 9e-24
Identities = 110/137 (80%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447
|| || |||||||| ||||| || || |||||||| || ||||||||||| ||||| |
Sbjct 954656 ACCTGAAATTCTCCTGACAAGACCCTGCGAGTGTAGATGTTACTGGTATAAGGTTCAATG 954597
Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507
||||||||||| |||| ||| ||||||||||| ||||| ||||| || || | | ||||
Sbjct 954596 GACTCATTATTCCCCAGAATCTGAGCAGTTGAGGCAGTAGGCATTGGGGCAATAAGTAAA 954537
Query 62508 CTATTTCTAAGACCGTA 62524
|| ||||| | ||| ||
Sbjct 954536 CTGTTTCTTACACCATA 954520
Score = 105 bits (116), Expect = 8e-18
Identities = 126/171 (74%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 62113 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62172
|||| ||||| || ||||||||||| |||||| ||| | || || || |||||||| |
Sbjct 957729 TCCAGCCGTAGAAGTGCATACTCGTGAGTTTGCCATAGTTAGGCTCAGCAATATGGATGT 957670
Query 62173 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62232
| | ||| || |||||||||||||| || || || || || ||||| || | | ||||
Sbjct 957669 TTAAAGACTGGCTTTGATCGATGAAAGCGCCTCTCTCGGCTGCCATCTTGAGAACAGTCT 957610
Query 62233 TTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62283
| || | |||||||| | || ||||| | | |||| | || || ||||
Sbjct 957609 TCTGAGAGATTTCCCACACGGTCTTATAGAGTTGCTTCAGGTCATCAGGAA 957559
Score = 100 bits (110), Expect = 4e-16
Identities = 136/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 62626 CATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGT 62685
|||| || ||||| || || | || || ||||| | ||| || || || || || || |
Sbjct 951253 CATACGTTTCATAAGGGCCATACTCCTTTGCTAGGTCACAGCTGGCTTCCAAAGCTCCAT 951194
Query 62686 AATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGAT 62745
||||||| ||||||||||||| |||||| | || ||||| ||||| ||||| || |
Sbjct 951193 AATAAATAGTTTCAAAGATCTGCTTATTCAATAACTGGGCTTCTGGGCTCTCAAAGGGGT 951134
Query 62746 AATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 62805
| | | || || || || || |||| ||||| || ||||| || || || | ||| |
Sbjct 951133 ATCTCATCAGGATGAAAGCATCTGCTAGACCTTGTACTCCAATTCCAATGGGCCGATGGC 951074
Query 62806 TCTTATTAGA 62815
||||| ||
Sbjct 951073 GTTTATTGGA 951064
Score = 87.8 bits (96), Expect = 2e-12
Identities = 111/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 63263 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCT 63322
|| |||||| ||||| |||||||| ||||||||||| || | || ||||| | | ||
Sbjct 947915 CTCCACTCGCTTCATGAAGAGATCTGGAATCCAAAGTGCAAAGAAGAGATCCCGGGCTCG 947856
Query 63323 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63382
|| || || || ||||||||||| || | || |||||| | | || || | |||||
Sbjct 947855 CTGCTCTTCCTTCCCTGTATTCTTCTTCAAGTCAAGGAACTCAAAGATGTCTAAGTGCCA 947796
Query 63383 CGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63415
|| |||| ||| || || | ||||||| ||
Sbjct 947795 AGGCTCCAGGTAAATAGCAAATGCTCCAGGGCG 947763
>seq30
Length=10348747
Score = 104 bits (114), Expect = 3e-17
Identities = 98/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 188483 TCTGTTGTTACTTTCTATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCA 188542
|||| |||||||||||| ||| | | ||| | ||||||||||| |||||||||||
Sbjct 7441907 TCTGCAGTTACTTTCTATAATGTGTACCTGGTTCTGCAAGCTTTCATACTGACTACTGCA 7441848
Query 188543 GTGTTTCTTGCTCTGACTACATGTACTCTACAATCAAAGAGAGATTTCAGTAAACTTGTA 188602
|| || |||| ||||| | | ||||||||| ||||||||||||||||| || ||| |
Sbjct 7441847 GTCTTCCTTGGCTTGACTGCCTATACTCTACAGTCAAAGAGAGATTTCAGCAAGTTTGGA 7441788
Query 188603 ACAGG 188607
||||
Sbjct 7441787 GCAGG 7441783
Score = 89.7 bits (98), Expect = 6e-13
Identities = 61/69 (88%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 188173 GCTCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCACA 188232
|||||||||||||||| ||||||||||| | ||||| |||||||| |||||||||||||
Sbjct 7457073 GCTCCTCCATCGAGGATGACTTCAACTACGGCAGCTGCGTGGCGTCGGCCAGCGTGCACA 7457014
Query 188233 TACGAATGG 188241
| || ||||
Sbjct 7457013 TCCGCATGG 7457005
>seq442
Length=2622005
Score = 100 bits (110), Expect = 4e-16
Identities = 233/346 (67%), Gaps = 19/346 (5%)
Strand=Plus/Plus
Query 162451 TTTGCCAACACAAAGGGTGGATATTTGTTCATTGGAGTTGATAATAATACACACAAAGTA 162510
||||||||||| | || ||||||||||||||||| | ||| || ||| || |
Sbjct 2582747 TTTGCCAACACTGATGGGGGATATTTGTTCATTGGTTTGGATGGGAACGAACAGCAAATC 2582806
Query 162511 ATTGGATTC-ACGGTGGGTCACGA-CTACCTCAAACTGGTAGAGAGAGATATAGAAAAGT 162568
||||| || | | | | | || | | || ||| ||||||| || ||||| || |
Sbjct 2582807 ATTGGTTTTGAAGCAGAG--AGGAGCGATCTTGAACATCTAGAGAGTGAAATAGACAAAT 2582864
Query 162569 ATATCCAAAAACTTCCTGTTGTGCATTTCTGCAAGAAAAAAGAGGACATCAAGTACGCAT 162628
|||||| | || ||||| || ||||| || | | ||| | || |||||| |||
Sbjct 2582865 GCATCCAACAGCTGCCTGTCACTCACTTCTGTGAGGAGCAGGAGAAGATAAAGTACACAT 2582924
Query 162629 GTAGATTCATCAAGGTGTATAAACCTGGTGATGAGACTACCTCGACATATGTGTGCGCAA 162688
| | ||||||| || | | |||||| | | | | ||| |||| || |||
Sbjct 2582925 GCAAATTCATCCCAGTCCACAGACCTGGAGCCGTGTGTTCCT------ATGTCTGTGCAC 2582978
Query 162689 TCAAAGTGGAAAGATGCTGCTGTGCTGTGTT---TGCGGATTGGCCAGAATCATGGTACA 162745
||| |||||| |||| ||||||||||||||| ||| || ||| || || ||| |||
Sbjct 2582979 TCAGAGTGGAGAGATTCTGCTGTGCTGTGTTCTCTGCAGA---GCCCGATTCCTGGCACA 2583035
Query 162746 TGGATACTAGTGGTAGTATGAAGAAGTATTCTCCAGATGAATGGGT 162791
|||| | | || |||||| || | || |||| ||||||||
Sbjct 2583036 TGGAAGACA---GCTGTGTGAAGAGGTTTACTACAGAGGAATGGGT 2583078
Score = 96.9 bits (106), Expect = 4e-15
Identities = 227/341 (67%), Gaps = 9/341 (3%)
Strand=Plus/Plus
Query 162451 TTTGCCAACACAAAGGGTGGATATTTGTTCATTGGAGTTGATAATAATACACACAAAGTA 162510
||||||||||| | || ||||||||||||||||| | ||| | || | | | || |
Sbjct 2595170 TTTGCCAACACTGATGGAGGATATTTGTTCATTGGTTTGGATGAAAAAAAAAAGCAAATT 2595229
Query 162511 ATTGGATTCACGGTGGGTCACGACTACCTCAAACTGGTAGAGAGAGATATAGAAAAGTAT 162570
| ||| || | | | | | || | || | | || || | || ||||||| ||
Sbjct 2595230 ACTGGTTTTAAAGCAGATGAGAACAAACTTAGGGAGCTAAAGTGTGAAATAGAAAGGTGC 2595289
Query 162571 ATCCAAAAACTTCCTGTTGTGCATTTCTGCAAGAAAAAAGAGGACATCAAGTACGCATGT 162630
|||||| | |||||||| || ||||| || | || |||| || |||||| ||||
Sbjct 2595290 ATCCAACAGCTTCCTGTCACTCACTTCTGTGAGGAGAAGCAGGAGATAAAGTACACATGC 2595349
Query 162631 AGATTCATCAAGGTGTATAAACCTGGTGATGAGACTACCTCGACATATGTGTGCGCAATC 162690
| ||| ||| || ||| | | |||||| | ||| |||| || ||| ||
Sbjct 2595350 AAATTTATCCCAGTCAGCAAATCAGAAGATGAGTGTTCCT------ATGTCTGTGCACTC 2595403
Query 162691 AAAGTGGAAAGATGCTGCTGTGCTGTGTTTGCGGATTGGCCAGAATCATGGTACATGGAT 162750
| |||||| |||| ||||||||||||||| || | ||| || || ||| ||||
Sbjct 2595404 AGAGTGGAGAGATTCTGCTGTGCTGTGTTCGCTGCAGAGCCTGATTCCTGG--CATGTTG 2595461
Query 162751 ACTAGTGGTAGTATGAAGAAGTATTCTCCAGATGAATGGGT 162791
| | | | || |||||| || | | |||| ||||||||
Sbjct 2595462 AAGACAGCT-GTGTGAAGAGGTTTACCACAGAGGAATGGGT 2595501
>seq184
Length=3314118
Score = 96.9 bits (106), Expect = 4e-15
Identities = 103/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663
|||| || || || || | || || ||||| |||||||||||||| ||||| | ||| |
Sbjct 1994076 CCTCATCCCTGCTGATGAGCTCATTTGAAAAAGTGAGTCCGGGCATGAGGCCTCTCTTCT 1994135
Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723
| ||||| ||||| | ||| ||||| || || ||||| || ||||| || || || ||||
Sbjct 1994136 TCAGCCAGAATATAGCAGCAAATGACCCAGAGAAGAAAATGCCTTCCACGGCGGCGAAGG 1994195
Query 33724 CAATAAGTCTCTCTCC 33739
| | | |||||| ||
Sbjct 1994196 CCACCACTCTCTCCCC 1994211
>seq78
Length=6419775
Score = 95.1 bits (104), Expect = 2e-14
Identities = 109/145 (75%), Gaps = 5/145 (3%)
Strand=Plus/Plus
Query 33230 GTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA----GACATAACTC 33285
|||| ||| || ||| |||| || | |||| ||| ||| |||| ||||| || |
Sbjct 5583561 GTTTACTTAGAAATCAGCATCCAAGGTAAAAGAATTCTCTG-TTGAACTCGACATCACCC 5583619
Query 33286 CCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATA 33345
|||| | |||||||| ||||| || || || || || || || |||||||| | ||| |
Sbjct 5583620 CCATCCTCTGGTATTCGCCCACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAGTGAAA 5583679
Query 33346 TATTTTCCATGAAATCAAACGGATT 33370
||||||||||||| ||||| |||||
Sbjct 5583680 TATTTTCCATGAAGTCAAATGGATT 5583704
>seq3761
Length=8927
Score = 91.5 bits (100), Expect = 2e-13
Identities = 226/341 (66%), Gaps = 9/341 (3%)
Strand=Plus/Minus
Query 162451 TTTGCCAACACAAAGGGTGGATATTTGTTCATTGGAGTTGATAATAATACACACAAAGTA 162510
||||||||||| | || ||||||||||||||||| | ||| | || ||| | || |
Sbjct 7048 TTTGCCAACACTGATGGAGGATATTTGTTCATTGGTTTGGATGAAAAAACAAAGCAAATT 6989
Query 162511 ATTGGATTCACGGTGGGTCACGACTACCTCAAACTGGTAGAGAGAGATATAGAAAAGTAT 162570
| ||| || | | | | || | || | | || || | || ||||||| ||
Sbjct 6988 ACTGGTTTTGAAGCAGATGAGAACAAACTTAGGGAGCTAAAGTGTGAAATAGAAAGGTGC 6929
Query 162571 ATCCAAAAACTTCCTGTTGTGCATTTCTGCAAGAAAAAAGAGGACATCAAGTACGCATGT 162630
|||||| | |||||||| || ||||| || | || |||| || |||||| ||||
Sbjct 6928 ATCCAACAGCTTCCTGTCACTCACTTCTGTGAGGAGAAGCAGGAGATAAAGTACACATGC 6869
Query 162631 AGATTCATCAAGGTGTATAAACCTGGTGATGAGACTACCTCGACATATGTGTGCGCAATC 162690
| ||| ||| || ||| | | |||||| | ||| |||| || ||| |
Sbjct 6868 AAATTTATCCCAGTCAGCAAATCAGAAGATGAGTGTTCCT------ATGTCTGTGCACTG 6815
Query 162691 AAAGTGGAAAGATGCTGCTGTGCTGTGTTTGCGGATTGGCCAGAATCATGGTACATGGAT 162750
| |||||| |||| ||||||||||||||| || | ||| || || ||| ||||
Sbjct 6814 AGAGTGGAGAGATTCTGCTGTGCTGTGTTCGCTGCAGAGCCCGATTCCTGG--CATGTTG 6757
Query 162751 ACTAGTGGTAGTATGAAGAAGTATTCTCCAGATGAATGGGT 162791
| | | | || |||||| || | | |||| ||||||||
Sbjct 6756 AAGACAGCT-GTGTGAAGAGGTTTACCTCAGAGGAATGGGT 6717
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629574167624880
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