Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peromyscus_20maniculatus_20bairdii_20[refseq_20GCF_5F000500345.1_202
013-12-03] 30,921 sequences; 2,630,541,020 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq1345 113 3e-20
>seq1345
Length=786133
Score = 113 bits (124), Expect = 3e-20
Identities = 130/175 (74%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807
|||||||||| || || |||||| || | |||||||| || ||||| | ||||||||||
Sbjct 220772 TGGCCTTTGCCGCCGTGGAAGGCATCTTCTTTTCTGGTTCTTTTGCATCAATATTCTGGC 220831
Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867
||||||| || || ||||| || | | |||||||| ||| | || ||| | || |
Sbjct 220832 TGAAGAAGCGGGGACTTATGCCCGGCCTTACATTTTCCAATGAGCTTATCAGCAGAGATG 220891
Query 22868 AAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACC 22922
| || |||| ||||||||||| || || |||| | ||| ||| | |||| ||
Sbjct 220892 AGGGCTTACATTGTGACTTTGCCTGCCTGATGTTCAAGCACCTGGTACACAAGCC 220946
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356099353479163
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |