Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peromyscus_20maniculatus_20bairdii_20[refseq_20GCF_5F000500345.1_202
013-12-03] 30,921 sequences; 2,630,541,020 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq874 89.7 4e-13
>seq874
Length=605229
Score = 89.7 bits (98), Expect = 4e-13
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230
|| |||||||| | || || ||||| ||||| ||||| | ||| || ||||| ||||||
Sbjct 546992 GGTTGCCAAGCCTTATCAGAAATGATCCAGTTTTACCTGGTAGAAGTGATGCCCCAGGCA 546933
Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGAC 127289
|| || || || || || || || || || | |||| |||||| || |||||||||||
Sbjct 546932 GAGAACCATGGCCCAGAAATCAAGGAGCATTTGAATTTCCTGGGAGAGAAGCTGAAGAC 546874
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429892334133752
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |