Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peromyscus_20maniculatus_20bairdii_20[refseq_20GCF_5F000500345.1_202
013-12-03] 30,921 sequences; 2,630,541,020 total letters
Query= NC_009334.1
Length=172764
Score E
Sequences producing significant alignments: (Bits) Value
seq874 105 7e-18
>seq874
Length=605229
Score = 105 bits (116), Expect = 7e-18
Identities = 103/133 (77%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 9861 AGGGCTACCTTGGATGCCAGGCCCTGTCAGAAATGATCCAATTCTACCTGGAGGAAGTCA 9920
|||| ||||| || ||||| ||| | |||||||||||||| || ||||||| ||||| |
Sbjct 547003 AGGGTTACCTGGGTTGCCAAGCCTTATCAGAAATGATCCAGTTTTACCTGGTAGAAGTGA 546944
Query 9921 TGCCACAGGCTGAAAACCAGGACCCTGAAGCCAAAGACCATGTAAATTCTTTGGGTGAAA 9980
|||| ||||| || ||||| | ||| ||| ||| || ||| | |||| |||| || |
Sbjct 546943 TGCCCCAGGCAGAGAACCATGGCCCAGAAATCAAGGAGCATTTGAATTTCCTGGGAGAGA 546884
Query 9981 ATCTAAAGACCCT 9993
| || ||||||||
Sbjct 546883 AGCTGAAGACCCT 546871
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 552503168047840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |