Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peromyscus_20maniculatus_20bairdii_20[refseq_20GCF_5F000500345.1_202 013-12-03] 30,921 sequences; 2,630,541,020 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq657 96.9 6e-15 >seq657 Length=1571634 Score = 96.9 bits (106), Expect = 6e-15 Identities = 114/152 (75%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || ||| ||||| | |||||| | ||||||| ||| || || || || | Sbjct 957735 CCTGCTTCCAGCCGTAGAAGTGCATACTCGTGAGTTTGCCATAGTTAGGCTCAGCAATAT 957676 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATA 204028 | ||||| | |||||||||||| ||||||||| ||||| | || || ||||| |||| | Sbjct 957675 GGATGTTTAAAGACTGGCTTTGATCGATGAAA-GCGCCTCTCTCGGCTGCCATCTTGAGA 957617 Query 204029 ATGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 | |||||||| || || |||||||| ||||| Sbjct 957616 ACAGTCTTCTGAGAGATTTCCCACACGGTCTT 957585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794847862575760