Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peromyscus_20maniculatus_20bairdii_20[refseq_20GCF_5F000500345.1_202
013-12-03] 30,921 sequences; 2,630,541,020 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq657 96.9 6e-15
>seq657
Length=1571634
Score = 96.9 bits (106), Expect = 6e-15
Identities = 114/152 (75%), Gaps = 2/152 (1%)
Strand=Plus/Minus
Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969
||| || ||| ||||| | |||||| | ||||||| ||| || || || || |
Sbjct 957735 CCTGCTTCCAGCCGTAGAAGTGCATACTCGTGAGTTTGCCATAGTTAGGCTCAGCAATAT 957676
Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATA 204028
| ||||| | |||||||||||| ||||||||| ||||| | || || ||||| |||| |
Sbjct 957675 GGATGTTTAAAGACTGGCTTTGATCGATGAAA-GCGCCTCTCTCGGCTGCCATCTTGAGA 957617
Query 204029 ATGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060
| |||||||| || || |||||||| |||||
Sbjct 957616 ACAGTCTTCTGAGAGATTTCCCACACGGTCTT 957585
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 794847862575760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |