Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peromyscus_20maniculatus_20bairdii_20[refseq_20GCF_5F000500345.1_202 013-12-03] 30,921 sequences; 2,630,541,020 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq28 307 1e-78 seq908 288 1e-72 seq155 190 3e-43 seq23 181 1e-40 seq990 84.2 3e-11 >seq28 Length=9942386 Score = 307 bits (340), Expect = 1e-78 Identities = 837/1268 (66%), Gaps = 30/1268 (2%) Strand=Plus/Plus Query 6896 GGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCA 6955 || ||||| || || ||| || | |||||||| | || || ||||||| ||| Sbjct 7790865 GGGATCGTGGTGTTCCTCTTGATGAGTGGGGTCATGACGCCGCCAGCTGTTTCGATGCCA 7790924 Query 6956 AGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCC--CTTCAC 7013 || |||| || |||||||| | || | ||| || || ||| ||| ||| ||| | Sbjct 7790925 AGCGACAACGGAGTCACGTCGAGTAGCAGCAGATCCTGCACA--TTC--TCCGACTTGTC 7790980 Query 7014 -CCGTTAAG-ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAAT 7071 ||| | || || || || || || | || || || || |||||||| |||||||| || Sbjct 7790981 GCCGATGAGGATAGCCGCCTGCACTGCGGCGCCATAGGCCACCGCCTCGTCGGGGTTGAT 7791040 Query 7072 CGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGAT 7131 | || ||||| || || ||||| || ||||| | | | || || || ||||| Sbjct 7791041 GCTCTTGTTCAGCTCCTTGCCGTTGAAGAAATCCTGCAGGAGCTTCTGGATCTTAGGGAT 7791100 Query 7132 TCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTC 7191 || || || || || |||| || || || | | | || || | ||| | || Sbjct 7791101 GCGGGTGGAGCCGCCCACCAGCACTATCTCCTGGATCTGGCCCTTGTCCAGCTTGGCATC 7791160 Query 7192 TCGAAGTGTTTTTTCGACAGGTTCCA---TACATTTACGGAACAAGTCCATACACAGTTC 7248 || || | ||||| || || |||| | | | ||||| | ||| || || Sbjct 7791161 GCGCAGAGCCTTTTCCACCGGCTCCAGGGTCCCT---CGGAAGAGGTCGGCGTTGAGCTC 7791217 Query 7249 CTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAAT 7308 ||| || || || ||||| ||||| || ||||| || ||||| ||||| | ||| || || Sbjct 7791218 CTCGAAGCGGGCGCGGGTGATGGAGGTGTAGAAGTCCACGCCCTCGTAGAGCGAGTCGAT 7791277 Query 7309 TTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCG 7368 || ||| | | || | | ||| | || ||||| |||||||| || || || || Sbjct 7791278 CTCGATGCTGGCCTGCGTGGACGAGCTCAGGGTGCGCTTGGCGCGCTCGCAGGCGGTGCG 7791337 Query 7369 TAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTC 7428 | || || | ||| ||| ||| ||| || ||||| ||||| || || ||||| Sbjct 7791338 CAGCCGGCGCACGGCGCGCTTGTTGGGCCCAATGTCCTTCTTGTGTTTGCGCTTGAACTC 7791397 Query 7429 TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCC 7488 || | | ||| | | | | ||||| ||||| ||||||| ||| || || || Sbjct 7791398 CTCGGCCAGGTGGCTGACCATACGGTTGTCGAAGTCTTCGCCACCCAGGTGGGTGTCGCC 7791457 Query 7489 CGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGT 7548 || || | || || || ||||| || | || ||| | | | || || || || || Sbjct 7791458 GGCCGTGGACTTCACCTCGAAGATGCCGTCCTCGATGGTCAGGATGGACACGTCGAAGGT 7791517 Query 7549 ACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG------TTCTTATC 7602 ||||| |||||||| || ||||| |||||| | ||| || | | |||||||| Sbjct 7791518 GCCACCGCCCAGGTCGAAGATGAGCACGTTCTTCTCGCCGCCGGCGCAGCCCTTCTTATC 7791577 Query 7603 GAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCC 7662 || ||||| ||||| ||||||||||| || || || || || || || ||| ||||| Sbjct 7791578 CAGGCCGTAGGCGATGGCCGCCGCCGTGGGCTCGTTGATGATGCGCAGCACGTTGAGGCC 7791637 Query 7663 AGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGAC 7722 | || || |||| ||||| || || || || ||||| ||||| |||||||| ||||| Sbjct 7791638 CGTGATGGTGCCCGCGTCTTTGGTGGCCTGGCGCTGCGAGTCGTTGAAGTAGGCGGGGAC 7791697 Query 7723 CGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTT 7782 ||| | ||||||| | || || || || || | ||| ||||| || ||||| || Sbjct 7791698 CGTGATGACCGCGCTCTGCACCTTGCCCCCCAGGTAGGCTTCGGCGATCTCCTTCATCTT 7791757 Query 7783 GGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGT-TTCGTTTCACCGTTAAAAT 7841 || || ||||| || |||||||| || | | | | || ||| | || || ||| | | Sbjct 7791758 CGTGAGGACCATGGAGGAAATCTCCTC-GGGGAAGAAGGTCTTCATCTCCCCTTTATACT 7791816 Query 7842 CAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCA 7901 | || | | |||| || | || | || | || ||| ||| | |||| Sbjct 7791817 CCACCTGCACTTTGGGCTT---CCCACCCTCGCTCACCACTCGGAACGGCCAGTGCTTCA 7791873 Query 7902 TATCGTCTTGGACCTGTTG-GTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAA 7960 | || || ||| || | |||| ||||| | ||||| || | ||| || || || Sbjct 7791874 TGTCCGACTGCACC-GTGGCGTCCTCGAACTTCCGCCCGATCAGCCTCTTGGCGTCGAAG 7791932 Query 7961 ACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCA 8020 | ||||| ||||||||||||| ||||||||| || ||||| ||||| || || || Sbjct 7791933 ATGGTGTTCGTGGGGTTCATGGCCACTTGGTTCTTGGCGGCGTCGCCGATGAGGCGCTC- 7791991 Query 8021 TTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATA 8080 | || || || || ||||| ||||| || || || || |||||||| || || Sbjct 7791992 --GGTGTCGGTGAAGGCCACGTAGCTGGGGGTGGTGCGGTTGCCCTGGTCGTTGGCGATG 7792049 Query 8081 ATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATA 8140 || || || | | | ||| |||| || ||||| || || || || || | || || Sbjct 7792050 ATCTCCACCTTGCCATGTTGGAAGACCCCCACGCAGGAGTAGGTGGTGCCCAGGTCGATG 7792109 Query 8141 CCGATTGC 8148 ||||| || Sbjct 7792110 CCGATAGC 7792117 >seq908 Length=515378 Score = 288 bits (318), Expect = 1e-72 Identities = 809/1232 (66%), Gaps = 24/1232 (2%) Strand=Plus/Minus Query 6926 GTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAAC 6985 ||||| | |||||| || || | ||| |||||||| || | |||||||| | | | Sbjct 360701 GTCATCACGCCACCCGCCGTCTCCAATCCTAGAGACAGGGGAGCTACGTCCAACAAAAGC 360642 Query 6986 AGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045 | ||||| || ||| | |||||| |||| || || || ||||||| ||||||| Sbjct 360641 AAATCTTGTACTTTTTCAGACTTGTCACCCATTAAAATAGCTGCCTGGACCGCCGCCCCG 360582 Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105 || || ||||||||||| || || || | || || || || || |||||||||||| Sbjct 360581 TAGGCCACCGCCTCATCAGGATTGATGCTCTTGTTGAGATCCCGTCCATTAAAATAATCC 360522 Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165 | || | || | || ||||| || || || || || |||| || || |||| Sbjct 360521 TGCAGCAGCTTCTGCACCTTGGGGATGCGCGTGGAGCCGCCCACCAGGACAATGTCATGG 360462 Query 7166 ACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCA---TACAT 7222 | ||| | || || ||||| | || || || | || || || || |||| | | | Sbjct 360461 ATTTTAGCCTTGTCCATCTTGGCATCCCGGAGAGACTTCTCCACGGGCTCCAGGGTGCCT 360402 Query 7223 TTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAA 7282 || || | ||| ||||| || ||||| || ||||| || ||||| || ||||| Sbjct 360401 CTA---AATAGGTCTGCACACAACTCTTCAAACCGCGCACGCGTGATGGACGTGTAGAAG 360345 Query 7283 TCAACGCCGTCGTATAACGAATCAATTTCAATGGTTG---TTTGTGCCGTCGAAGATAAC 7339 || | ||| ||| | | || || || || | | ||| | |||| | || || | Sbjct 360344 TCGATGCCCTCGAACAGGGAGTCGATCTCCA-GATTGGCCTGGGTGC--TGGACGACAGG 360288 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || | ||| |||||||| || ||||| || | || || | ||| ||| ||| | Sbjct 360287 GTCCTCTTGGCGCGCTCGCAGGCCGTGCGCAGGCGCCGCACGGCGCGCTTGTTCTGGCTG 360228 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCG 7459 || || ||||| || || | || ||||| || |||||| | | || | ||| Sbjct 360227 ATGTCCTTCTTGTGCTTCCTCTTGAACTCCTCCACGAAGTGGCTCACCAGCCGGTTGTCG 360168 Query 7460 AAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCT 7519 || || || || |||| ||| || || ||||| || || || || || ||||| || | Sbjct 360167 AAGTCCTCCCCGCCCAGGTGCGTGTCGCCCGCCGTGGCCTTCACCTCGAAGATGCCGTCG 360108 Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTC 7579 || || | | | || || || ||||| || || |||||||| || ||||| || | | Sbjct 360107 TCGATCGTCAGGATGGACACGTCGAACGTGCCGCCGCCCAGGTCGAAGATGAGCACATGC 360048 Query 7580 --GTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCAT 7637 | || | ||| | ||||| | || || || || || || ||||| || |||| Sbjct 360047 CGCTCTCCATGACTTCCT--TTATCCAAGCCATAGGCAATGGCAGCTGCCGTCGGCTCAT 359990 Query 7638 TAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 | || || | || ||| || || || || || | |||||||| || || || ||| Sbjct 359989 TGATGATTCTCAGCACA-TTGAGTCCTGCGATGACACCTGCATCTTTGGTGGCCTGGCGT 359931 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || || ||||| || |||||||| ||||| | || || | ||||| | | || | | Sbjct 359930 TGAGAGTCGTTGAAATAGGCCGGCACCGTGATCACAGCATTGGTGACACTGTGGCCCAAA 359871 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 | | || || | || ||||| ||||| || ||||| || || ||||| || | Sbjct 359870 AAAGCCTCTGCAGTCTCCTTCATCTTGGTCAGCACCATGGAGGAGATCTCCTCGGGGTAG 359811 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 || |||| | ||||| || | || | | |||| || || | || Sbjct 359810 AAGGCTTTCTTCTCACCTTTGTAGGACACCAGCACCTTGGGCTTGCCC---CCTTCGTTA 359754 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 || || | | | | |||| ||||| || || ||| | || |||||| || Sbjct 359753 ATGACTTGAAATGGCCAAAGCTTCATGTCCGACTGCACCACCGGATCGTTAAACTTCCTG 359694 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 || || ||||| || ||||||||||| ||||| | |||||||||||| |||||||| Sbjct 359693 CCAATTAGACGTTTGGCATCAAAAACAGTGTTCTGGGGGTTCATGGCCACCTGGTTCTTG 359634 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 ||||| |||||||| || || || | | || || || || ||||| |||||||| Sbjct 359633 GCCGCATCCCCGATGAGCCGCTC---AGTGTCGGTGAAGGCCACGTAGCTGGGGGTCGTG 359577 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCAC 8116 || || || |||||||| || || || || || | ||| || | ||||| |||||| Sbjct 359576 CGGTTGCCCTGGTCGTTGGCGATGATCTCCACCTTGCCGTGCTGGAACACGCCCACGCAC 359517 Query 8117 GAATACGTTGTTCCTAAATCAATACCGATTGC 8148 || || || || || | || || || || || Sbjct 359516 GAGTAGGTGGTGCCCAGGTCGATGCCTATGGC 359485 >seq155 Length=3997344 Score = 190 bits (210), Expect = 3e-43 Identities = 366/540 (68%), Gaps = 0/540 (0%) Strand=Plus/Minus Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || || || || || || |||||||||||||| | |||||||||||||| || || || Sbjct 783142 GCACCATAAGCAACAGCTTCATCGGGGTTAATGCTCTTATTCAGTTCTTTTCCATTGAAG 783083 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 | || | | | ||||| || ||||||| || || ||||| |||| || || Sbjct 783082 AAGTCTTGCAGAAGCTTCTGAATCTTGGGGATTCTGGTAGAACCACCCACCAGGACAATG 783023 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 |||| | | || || || | || | |||||||| | ||||| ||||| |||| | Sbjct 783022 TCATGGATCTGTGACTTGTCTAGTTTGGCATCTCGAAGGGCCTTTTCTACAGGGTCCAGA 782963 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 ||||||| ||| | | ||| ||||| || |||||||||||||| |||||| Sbjct 782962 GTGCCTCGGAACAGGTCAGCATTTAATTCTTCAAATCGAGCACGGGTAATGGAGGTATAG 782903 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || || | || || || | |||||||| ||||| | | || | | || || | Sbjct 782902 AAGTCGATTCCCTCATAGAGAGAATCAATCTCAATACTGGCCTGGGTGCTGGAGGAGAGG 782843 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || ||||| || || ||||| || || || | ||| | | || | | ||| | Sbjct 782842 GTACGCTTAGCCCGTTCACAGGCAGTACGCAGACGCCTGACAGCTCTCTTGTTCTCACTG 782783 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCG 7459 || || ||||| || || || |||||||| || ||| || | | || ||| Sbjct 782782 ATGTCCTTCTTGTGCTTCCGCTTAAACTCAGCAATGAAATGGTTGACCATTCGGTTATCA 782723 Query 7460 AAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCT 7519 || ||||| ||||||||||| || || || || || | |||||| ||||| || || | Sbjct 782722 AAGTCTTCTCCACCCAAGTGGGTGTCTCCAGCTGTTGATTTGACCTCAAAAATTCCATCC 782663 Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTC 7579 ||||| | | | || |||||||| |||||||| |||| ||||||||| || || ||| Sbjct 782662 TCAATAGTGAGGATTGACACATCAAAAGTACCACCTCCCAAGTCAAAAATCAGCACATTC 782603 Score = 111 bits (122), Expect = 2e-19 Identities = 116/150 (77%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACA 7653 |||||||| | || || || ||||| || || ||||||||||| ||||| ||||| ||| Sbjct 782501 TTCTTATCTAACCCATAAGCAATAGCAGCAGCGGTTGGTTCATTGATAATTCGAAGCACA 782442 Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713 || ||||| ||||||||| | |||||||| || || ||||| || || || || ||||| Sbjct 782441 -TTGAGGCCGGCAATAGTTCCAGCATCTTTTGTTGCCTGTCGCTGAGAGTCATTGAAGTA 782383 Query 7714 GGCCGGGACCGTTACGACCGCGTCCGTGAC 7743 ||| || || || || || || | ||||| Sbjct 782382 GGCTGGCACAGTGACCACAGCATTGGTGAC 782353 Score = 86.0 bits (94), Expect = 8e-12 Identities = 135/193 (70%), Gaps = 3/193 (2%) Strand=Plus/Minus Query 7956 CAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGAC 8015 ||||||||||||| |||||||||| || || |||||||| || ||||| || || | Sbjct 781761 CAAAAACTGTGTTGGTGGGGTTCATTGCAACCTGATTCTTCGCGGCATCCCCAATTAGCC 781702 Query 8016 GTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCG 8075 |||| | || || || || ||||| ||| || ||||| || || ||||| || | Sbjct 781701 GTTC---TGTGTCAGTGAAAGCAACGTAGCTTGGTGTGGTTCGGTTTCCCTGGTCATTGG 781645 Query 8076 CAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAAT 8135 |||| || || || ||| || |||| || || || || || || || || | || Sbjct 781644 CAATTATCTCCACCTTCCCGTGCTGGAAGACACCCACACAGGAGTAGGTGGTGCCAAGAT 781585 Query 8136 CAATACCGATTGC 8148 | || |||| ||| Sbjct 781584 CGATGCCGACTGC 781572 >seq23 Length=11062726 Score = 181 bits (200), Expect = 1e-40 Identities = 425/640 (66%), Gaps = 6/640 (1%) Strand=Plus/Minus Query 6943 AGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTC 7002 |||||| | ||||| || ||||| || || |||||||| | || || |||||| || Sbjct 4865091 AGTTTCAATACCAAGGGAGAGAGGAGTGACATCCAAGAGCATCAAATCCTGAACATTCTC 4865032 Query 7003 GTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATC 7062 | || || | || |||||||| ||||| | || || || || || || ||||| Sbjct 4865031 AGACTTGTCTCCAGATAGAATGGCGGCCTGGACAGCTGCACCATAAGCAACAGCTTCATC 4864972 Query 7063 GGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAAT 7122 |||||||| | |||||||||||||| || | ||| | || | | | ||| | Sbjct 4864971 AGGGTTAATGCTCTTATTCAGTTCTTTTCCACTGAAAAAGTCTTGCAGAAGCTTCTGAGT 4864912 Query 7123 TTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGAT 7182 || ||||||| || || ||||| |||| || || |||| | | || || || | Sbjct 4864911 CTTGGGGATTCTGGTAGAACCACCCACCAGGACAATGTCATGGATCTGTGACTTGTCTAG 4864852 Query 7183 CTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCA---TACATTTACGGAACAAGTCCAT 7239 || | |||||||| | ||||| ||||| |||| | | || |||||| ||| Sbjct 4864851 TTTGGCATCTCGAAGGGCCTTTTCTACAGGGTCCAGAGTGCCTT---GGAACAGGTCAGC 4864795 Query 7240 ACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAA 7299 | | ||| ||||| || ||| |||||||||| |||||||| || | || || || | Sbjct 4864794 ATTTAATTCTTCAAATCGAGCATGGGTAATGGAGGTATAGAAGTCGATTCCCTCATAGAG 4864735 Query 7300 CGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACA 7359 |||||||| ||||| | | || | | || || | || |||| | || ||||| Sbjct 4864734 AGAATCAATCTCAATACTGGCCTGGGTGCTGGAGGAGAGTGTATGCTTAGTCCGTTCACA 4864675 Query 7360 CGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACG 7419 || || || | || | | || | | | | || || ||||| || || || Sbjct 4864674 GGCAGTACGCAGACACCTGACAGCTCTCTTCCTCTCATTGATGTCCTTCTTGTGCTTTCG 4864615 Query 7420 TTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTG 7479 |||||||| || ||| || | | || ||| || ||||| ||||||||||| Sbjct 4864614 CTTAAACTCAGCAATGAAATGATTGACCATTCGGTTATCAAAGTCTTCTCCACCCAAGTG 4864555 Query 7480 TGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAAC 7539 || || || || || | |||||||||||| || || | ||| | | | | || || Sbjct 4864554 GGTGTCTCCAGCTGTTGATTTGACTTCAAAAATTCCATCCTCAGTAGTGAGGATTGACAC 4864495 Query 7540 ATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTC 7579 |||||| |||||||| |||| ||||||| | || || ||| Sbjct 4864494 ATCAAAGGTACCACCTCCCAAGTCAAAAGTCAGCACATTC 4864455 Score = 96.9 bits (106), Expect = 4e-15 Identities = 133/186 (72%), Gaps = 14/186 (8%) Strand=Plus/Minus Query 7625 GCCGTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTT 7683 || ||||| ||||| ||||| |||| ||| || | ||||||||||||| | |||||||| Sbjct 4863837 GCAGTTGGCTCATTGATAATTTGAAGCACA-TTGAAGCCAGCAATAGTTCCAGCATCTTT 4863779 Query 7684 CGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGAC 7743 || || ||||| || ||||| || ||||| || || || || || || Sbjct 4863778 TGTTGCCTGTCGCTGAGAATCATTGAAGTAAGCTGGCACAGT------------GGTAAC 4863731 Query 7744 TTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAAT 7803 | |||| || ||||| | ||| || || || ||||| || || |||||||| || || | Sbjct 4863730 TGTCTTTCCAAGATAGGTTTCTGCAATTTCCTTCATCTTCGTCAGAACCATAGAGGACAC 4863671 Query 7804 CTCTTC 7809 ||| || Sbjct 4863670 CTCCTC 4863665 >seq990 Length=384497 Score = 84.2 bits (92), Expect = 3e-11 Identities = 243/374 (65%), Gaps = 0/374 (0%) Strand=Plus/Minus Query 6926 GTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAAC 6985 |||| || ||||| ||||| | ||||| || ||||| || | || |||||| | | Sbjct 273209 GTCAGGATTCCACCGTAAGTTTTAATACCAAGGGAAAGAGGGGTGATGTTCAAGAGCAGC 273150 Query 6986 AGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045 | || |||||| || | || || | || ||||| | |||| | || Sbjct 273149 AAATCCTGAACATTCTCAGACTTATCTCCAGATAGAATGGCCTCAAGGACAGCTGCATGA 273090 Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105 || || | || ||| | |||||||| |||||||||||||| || | || | || Sbjct 273089 TAAGCAAGAGCTTCACCAGGGTTAATGTACTTATTCAGTTCTTTGCCACTGAAGAAGTCT 273030 Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165 | | | | ||||| || ||||||| ||| || |||| |||| | | |||| Sbjct 273029 CACAGAAGCTTCTGAATCTTGGGGATTCTTGTAGAGCCACACACCAGGATAGTATCATGG 272970 Query 7166 ACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA 7225 | | || ||||| | || | ||| |||| | ||||| ||||| |||| | | Sbjct 272969 ATCTGTGACTTATCTAGTTTGGCATCTTGAAGAGCCTTTTCTACAGGATCCAGAGTGCCA 272910 Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285 |||||| ||| | |||||| | ||| || |||| ||||||||| ||||| || ||| Sbjct 272909 TGGAACAGGTCAGCATTCAGTTCTTTAAATCGAGCACAGGTAATGGAGGTATAAAAGTCA 272850 Query 7286 ACGCCGTCGTATAA 7299 | || || || || Sbjct 272849 ATTCCCTCATAAAA 272836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634887313233640