Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peromyscus_20maniculatus_20bairdii_20[refseq_20GCF_5F000500345.1_202
013-12-03] 30,921 sequences; 2,630,541,020 total letters
Query= NC_015049.1
Length=124335
Score E
Sequences producing significant alignments: (Bits) Value
seq1923 113 4e-20
seq1706 113 4e-20
seq1159 113 4e-20
seq1709 104 2e-17
seq1088 104 2e-17
seq1922 96.9 3e-15
seq1272 95.1 1e-14
seq989 95.1 1e-14
seq870 95.1 1e-14
seq1497 93.3 3e-14
seq2521 91.5 1e-13
seq1286 91.5 1e-13
seq1644 89.7 4e-13
seq2465 84.2 2e-11
seq3450 82.4 6e-11
>seq1923
Length=47214
Score = 113 bits (124), Expect = 4e-20
Identities = 137/187 (73%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||||||| | ||||| || || ||| | ||||| | | |||||| | | ||||
Sbjct 7458 CCTCATGGTACACATGGCATGTGTATCTCTGCTCCTCCCCAGAAGGTACCACCACAGCTG 7399
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||||||||| || |||||||| ||||| |||||||| |||||| || ||| | | ||
Sbjct 7398 CCCACTTCTGGAAGGTTCCATCCCCAGCAGGTCTGGTCTCCACCAGCTCCATGTCCTGAG 7339
Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528
|| ||| |||| | || | ||||| || |||| || || ||||| |||||||| ||
Sbjct 7338 TCTGTTCCTCTCCATCCCTCTGCCAGGTCATGGAGATCTCAGCAGGGTAGAAGCCCAGGG 7279
Query 529 CCCAACA 535
|||| ||
Sbjct 7278 CCCAGCA 7272
>seq1706
Length=50208
Score = 113 bits (124), Expect = 4e-20
Identities = 137/187 (73%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||||||| | |||||||| || ||| | ||||| | | ||| || | | ||||
Sbjct 6483 CCTCATGGTGCACATGACATGTGTATCTCTGCTCCTCCCCAGAAGGCACCACCACAGCTG 6424
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||||||||| || |||||||| |||| |||||||| |||||| || ||| | | ||
Sbjct 6423 CCCACTTCTGGAAGGTTCCATCCCCAGAAGGTCTGGTCTCCACCAGCTCCATGTCCTGAG 6364
Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528
|| ||| ||| | || | ||||| ||||||| ||| || ||||| |||||||| ||
Sbjct 6363 TCTGTTCCTCCCCATCCCTCTGCCAGGTTATGGAAATCTCAGCAGGGTAGAAGCCCAGGG 6304
Query 529 CCCAACA 535
|||| ||
Sbjct 6303 CCCAGCA 6297
>seq1159
Length=122000
Score = 113 bits (124), Expect = 4e-20
Identities = 137/187 (73%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||||||| | |||||||| || ||| | ||||| | | ||| || | | ||||
Sbjct 14936 CCTCATGGTACACATGACATGTGTATGTCTGCTCCTGCCCAGAAGGCACCACCACAGCTG 14995
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||||||||| || |||||||| |||| |||||||| |||||| || ||| | | ||
Sbjct 14996 CCCACTTCTGGAAGGTTCCATCCCCAGAAGGTCTGGTCTCCACCAGCTCCATGTCCTGAG 15055
Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528
|| ||| ||| | || | ||||| ||||||| || || ||||| ||||||||| ||
Sbjct 15056 TCTGTTCCTCCCCATCCCTCTGCCAGGTTATGGAGATCTCAGCAGGGTAGAAGCCAAGGG 15115
Query 529 CCCAACA 535
|||| ||
Sbjct 15116 CCCAGCA 15122
Score = 98.7 bits (108), Expect = 8e-16
Identities = 134/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||||||| | ||||| || || ||| | ||||| | | ||| || | | | ||
Sbjct 116746 CCTCATGGTGCACATGGCATGTGTATCTCTGCTCCTCCCCAGAAGGCACAACCAGAGATG 116805
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||||||||| || |||||||| |||| |||||||| |||||| || ||| | | ||
Sbjct 116806 CCCACTTCTGGAAGGTTCCATCCCCAGAAGGTCTGGTCTCCACCAGCTCCATGTCCTGAG 116865
Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528
|| ||| ||| | || | ||||| ||||||| || || ||||| |||||||| ||
Sbjct 116866 TCTGTTCCTCCCCATCCCTCTGCCAGGTTATGGAGATCTCAGCAGGGTAGAAGCCCAGGG 116925
Query 529 CCCAACA 535
|||| ||
Sbjct 116926 CCCAGCA 116932
Score = 86.0 bits (94), Expect = 5e-12
Identities = 131/187 (70%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||||||| | ||||| || || ||| | ||||| | | ||| || | | ||||
Sbjct 77767 CCTCATGGTGCACATGGCATGTGTATCTCTGCTCCTCCCCAGAAGGCACCACCACAGCTG 77826
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||||||||| || |||||||| |||| |||||||| |||||| || | | | | |
Sbjct 77827 CCCACTTCTGGAAGGTTCCATCCCCAGAAGGTCTGGTCTCCACCAGCTCAATGTCCTGAA 77886
Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528
|||| | ||| | | | ||||| || |||| || || ||||| |||||||| ||
Sbjct 77887 TCAGATCCTCCCCATCTCTCTGCCAGGTCATGGAGATCTCAGCAGGGTAGAAGCCCAGGG 77946
Query 529 CCCAACA 535
|||| ||
Sbjct 77947 CCCAGCA 77953
>seq1709
Length=58760
Score = 104 bits (114), Expect = 2e-17
Identities = 135/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||||||| | ||||| || || ||| | ||||| | | ||| || | | ||||
Sbjct 58064 CCTCATGGTGCACATGGCATGTGTATCTCTGCTCCTCCCCAGAAGGCACCACCACAGCTG 58005
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||||||||| || |||||||| |||| |||||||| |||||| || ||| | | ||
Sbjct 58004 CCCACTTCTGGAAGGTTCCATCCCCAGAAGGTCTGGTCTCCACCAGCTCCATGTCCTGAG 57945
Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528
|| ||| ||| | || | ||||| ||||||| || || ||||| |||||||| ||
Sbjct 57944 TCTGTTCCTCCCCATCCCTCTGCCAGGTTATGGAGATCTCAGCAGGGTAGAAGCCCAGGG 57885
Query 529 CCCAACA 535
|||| ||
Sbjct 57884 CCCAGCA 57878
>seq1088
Length=669290
Score = 104 bits (114), Expect = 2e-17
Identities = 128/175 (73%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||||||| | |||||||| || || || | ||| | ||||| || | | ||||
Sbjct 766 CCTCATGGTGCACATGACATGTGTAATTCTTCTCCTCCCCAGCAGGAACCACCACAGCTG 707
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||||||||| || |||||||| |||| |||||||| |||||| || ||| | | ||
Sbjct 706 CCCACTTCTGGAAGGTTCCATCCCCAGAAGGTCTGGTCTCCACCAGCTCCATGTCCTGAG 647
Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCC 523
|| ||| ||| | || | ||||| ||||||| || || ||||| ||||||||
Sbjct 646 TCTGTTCCTCCCCATCCCTCTGCCAGGTTATGGAGATCTCAGCAGGGTAGAAGCC 592
>seq1922
Length=46725
Score = 96.9 bits (106), Expect = 3e-15
Identities = 100/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 405 GCTGCCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCA 464
|||||||||||||| || |||||||| || || || ||||| |||||| || ||| |
Sbjct 17254 GCTGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACCAGCTCCATGTCC 17195
Query 465 TCAGTCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCA 524
| |||| ||| ||| | || | ||||| ||||||| ||| || ||||| ||||||||
Sbjct 17194 TGAGTCTGTTCCTCCCCATCCCTCTGCCAGGTTATGGAAATCTCAGCAGGGTAGAAGCCC 17135
Query 525 GTGGCCCAACA 535
|||||| ||
Sbjct 17134 AGGGCCCAGCA 17124
>seq1272
Length=521552
Score = 95.1 bits (104), Expect = 1e-14
Identities = 133/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||||||| | ||||| ||||| ||| | ||||| | | ||| || | | ||||
Sbjct 40734 CCTCATGCTGCACATGGCAGGTGTATCTCTGCTCCTCTCCAGAAGGCACCACCACAGCTG 40675
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||||||||| || |||||||| || || || ||||| |||||| || ||| | | |
Sbjct 40674 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACCAGCTCCATGTCTTGAA 40615
Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528
|||||| || | |||| ||||| || | || || || ||||| |||||||| ||
Sbjct 40614 TCAGTTCTTCCCCACCCAACTGCCAGGTCAGGGAGATCTCAGCAGGGTAGAAGCCCAGGG 40555
Query 529 CCCAACA 535
|||| ||
Sbjct 40554 CCCAGCA 40548
Score = 93.3 bits (102), Expect = 3e-14
Identities = 135/188 (72%), Gaps = 2/188 (1%)
Strand=Plus/Minus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||||||| ||||| || || ||| | ||||| | | ||| || | | ||||
Sbjct 17912 CCTCATGGACCACATGGCATGTGTATCTCTGCTCCTCCCCAGAAGGCACCACCACAGCTG 17853
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||||||||| || |||||||| |||| |||||||| |||||| || ||| | | |
Sbjct 17852 CCCACTTCTGGAAGGTTCCATCCCCAGAAGGTCTGGTCTCCACCAGCTCCATGTCCTGAA 17793
Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAG-CCAGTG 527
|||| | ||| | || | ||||| ||||||| || || ||||| |||||| |||| |
Sbjct 17792 TCAGATCCTCCCCATCCCTCTGCCAGGTTATGGAGATCTCAGCAGGGTAGAAGTCCAG-G 17734
Query 528 GCCCAACA 535
||||| ||
Sbjct 17733 GCCCAGCA 17726
>seq989
Length=535891
Score = 95.1 bits (104), Expect = 1e-14
Identities = 133/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||||||| ||||| || || ||||| ||||| | | |||||| | | || ||
Sbjct 186274 CCTCATGCAGCACATGGCATGTGTATTTCTGCTCCTCCCCAGAAGGTACCACCACGGTTG 186215
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||||||||| || |||||||| || || |||||||| || | | ||| | | |
Sbjct 186214 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGTCTGGTCTCAATAAGATCCATGTCCTGGG 186155
Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528
|||| | ||| | || | ||||| || | ||||||||||||||||||| |||| ||
Sbjct 186154 TCAGATCCTCCTCATCCCTCTGCCAGGTCAGGGTAATGTCCGCAGGATAGCAGCCCAGGG 186095
Query 529 CCCAACA 535
|||| ||
Sbjct 186094 CCCAGCA 186088
Score = 93.3 bits (102), Expect = 3e-14
Identities = 165/241 (68%), Gaps = 0/241 (0%)
Strand=Plus/Minus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||||||| | ||||| || || ||| | ||||| | | ||| || | | ||||
Sbjct 281987 CCTCATGGTGCACATGGCATGTGTATCTCTGCTCCTCCCCAGAAGGCACCGCCACAGCTG 281928
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||||||||| ||||||||||| || | |||||||| |||||| || ||| | | |
Sbjct 281927 CCCACTTCTGGAAAGTTCCATCCCCTGAAGGTCTGGTCTCCACCAGCTCCATGTCCTGAT 281868
Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528
|||| | ||| | | | ||||| || | ||| || |||| |||||||||||| |
Sbjct 281867 TCAGGTCCTCCCCATCTGTCTGCCAGGTCAGGGTGATCTCCGAAGGATAGAAGCCCAGAG 281808
Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACCTGTG 588
|||| || | || || || | | |||||| | | || |||||| || ||| ||
Sbjct 281807 CCCAGCACCTCAGGGTGACATCTCCTTCAGGTCTGGGGTGATGGGTCACATGTGCCTTTG 281748
Query 589 G 589
|
Sbjct 281747 G 281747
Score = 89.7 bits (98), Expect = 4e-13
Identities = 132/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||||||| ||||| || || ||| | ||||||| | ||| || | | ||||
Sbjct 141078 CCTCATGCAGCACATGGCATGTGTATCTCTGCTCTTCTCCCGAAGGAACCACCACAGCTG 141019
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||||||||| || |||||||| || || ||||| || || | | ||| | | |
Sbjct 141018 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGTCTTGTCTCAATAAGATCCATGTCCTGGG 140959
Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528
|||| | ||| | || | ||||| || | |||||||||||||||||||||||| ||
Sbjct 140958 TCAGGTCCTCCTCATCCCTCTGCCAGGTCAGGGTAATGTCCGCAGGATAGAAGCCCAGGG 140899
Query 529 CCCAACA 535
|||| ||
Sbjct 140898 CCCAGCA 140892
Score = 89.7 bits (98), Expect = 4e-13
Identities = 132/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||| ||| | ||||| || || ||| | ||||| | | ||||||| | | ||||
Sbjct 261542 CCTGATGCTGCACATGGCACGTGTATCTCTGCTCCTCTCCAGAAGGTACTACCAGAGCTG 261483
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||||||||| || |||||||| || || || ||||| ||||| | ||| | | |
Sbjct 261482 CCCACTTCTGGAAGGTTCCATCGCCTGCAGGCCTGGTGTCCACAAGTTCCATGTCCTGGG 261423
Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528
|||| | ||| | || | ||||| || | ||| ||||| ||||| |||||||| ||
Sbjct 261422 TCAGATCCTCCCCATCCTTCTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGGG 261363
Query 529 CCCAACA 535
|||| ||
Sbjct 261362 CCCAGCA 261356
>seq870
Length=403371
Score = 95.1 bits (104), Expect = 1e-14
Identities = 133/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||||||| ||||| || || ||| | ||||| | | ||| || | | ||||
Sbjct 10395 CCTCATGGACCACATGGCATGTGTATCTCTGCTCCTCCCCGGAAGGCACCACCACAGCTG 10454
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||||||||| || |||||||| |||| |||||||| |||||| || ||| | | ||
Sbjct 10455 CCCACTTCTGGAAGGTTCCATCCCCAGAAGGTCTGGTCTCCACCAGCTCCATGTCCTGAG 10514
Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528
|| ||| ||| | || | ||||| || |||| || || ||||| |||||||| ||
Sbjct 10515 TCTGTTCCTCCCCATCCCTCTGCCAGGTCATGGAGATCTCAGCAGGGTAGAAGCCCAGGG 10574
Query 529 CCCAACA 535
|||| ||
Sbjct 10575 CCCAGCA 10581
Score = 82.4 bits (90), Expect = 6e-11
Identities = 105/145 (72%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 405 GCTGCCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCA 464
|||||||||||||| || |||||||| |||| |||||||| |||||| || || |
Sbjct 143120 GCTGCCCACTTCTGGAAGGTTCCATCCCCAGAAGGTCTGGTCTCCACCAGCTCCGTGTCC 143179
Query 465 TCAGTCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCA 524
| |||| ||| ||| | || | ||||| || | ||| ||| |||| ||||||||
Sbjct 143180 TGAGTCTGTTCCTCCCCATCCCTCTGCCAGGTCAGGGTGATGAGGACAGGGTAGAAGCCC 143239
Query 525 GTGGCCCAACATTTTAGTGTTACTT 549
|||||| || | || || ||||
Sbjct 143240 AGGGCCCAGCACCTCAGGGTGACTT 143264
>seq1497
Length=328657
Score = 93.3 bits (102), Expect = 3e-14
Identities = 125/174 (72%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 781 TCTAATTTCCTTTTAGAAATTTGAGAGGACATGTCTCTAGCGGTCCAGGTCCTGAGATCT 840
||||| || | ||||| || || |||| || ||| | | |||||||| | || ||
Sbjct 324721 TCTAAATTGCGCTTAGAGATCTGTGAGGCCAAGTCCTTTGTGGTCCAGGAGCGCAGGTCG 324662
Query 841 TCATTCAAAGAAATGTAGTCCCTGCCATCATAGGCCTGTTGACAGTAGCCTCGAAGGAGG 900
||||||| | ||||| ||| |||||||||||||| |||||||| || || | ||
Sbjct 324661 TCATTCAGGGCGATGTAATCCTGGCCATCATAGGCCTCCTGACAGTACCCGCGGTGCTGG 324602
Query 901 GTTCCATCCGGCCCCACAACACAGCCGGACATCCATTGGAGGGTATGTGGTTCT 954
|| |||||||||| | |||||| ||||||| || || || || || |||
Sbjct 324601 CGGCCTTCCGGCCCCAGTTCGCAGCCGTACATCCACTGCAGAGTGTGAGGGTCT 324548
Score = 89.7 bits (98), Expect = 4e-13
Identities = 132/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||||||| | |||||| || || ||||| |||| | |||||| | | ||||
Sbjct 211265 CCTCATGCTGTACATGGCATGTGTATTTCAGCTCCTCTCCAAAAGGTACCACCACAGCTG 211206
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||||||||||||||| ||||| || || |||||||| ||||| || ||| | | |
Sbjct 211205 CCCACTTCTGAAAAGTCCCATCCCCTGCAGGTCTGGTCTCCACAAGCTCCATGTCCTGTG 211146
Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528
| ||| ||| | || | | ||| || | ||| ||||| ||||| ||||| || ||
Sbjct 211145 CCTGTTCCTCCTCATCCCTCTTCCAGGTCAGGGTGATGTCAGCAGGGTAGAATCCCAGGG 211086
Query 529 CCCAACA 535
|||| ||
Sbjct 211085 CCCAGCA 211079
Score = 84.2 bits (92), Expect = 2e-11
Identities = 91/121 (75%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 820 GCGGTCCAGGTCCTGAGATCTTCATTCAAAGAAATGTAGTCCCTGCCATCATAGGCCTGT 879
|| ||||| ||| | || || || |||| | ||||| || | ||| || |||||
Sbjct 309940 GCCGTCCACGTCGTCAGGTCGTCGTTCAGGGCGATGTAATCGCGGCCGTCGTAGGCGAAC 309881
Query 880 TGACAGTAGCCTCGAAGGAGGGTTCCATCCGGCCCCACAACACAGCCGGACATCCATTGG 939
|||| ||| || ||||||||| || |||| |||||| ||||||||||||||||| |||
Sbjct 309880 TGACTGTACCCGCGAAGGAGGCGCCCGTCCGACCCCACCACACAGCCGGACATCCACTGG 309821
Query 940 A 940
|
Sbjct 309820 A 309820
>seq2521
Length=31182
Score = 91.5 bits (100), Expect = 1e-13
Identities = 131/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 351 TCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTGCC 410
||||| | ||||| || || ||| | ||||| | | ||| || | | ||||||
Sbjct 6436 TCATGGTGCACATGGCATGTGTATCTCTGCTCCTCCCCAGAAGGCACCACCACAGCTGCC 6377
Query 411 CACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAGTC 470
|||||||| || |||||||| || || || ||||| |||||| || ||| | | ||||
Sbjct 6376 CACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACCAGCTCCATGTCCTGAGTC 6317
Query 471 AGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGGCC 530
||| ||| | || | ||||| || |||| || || ||||| |||||||| ||||
Sbjct 6316 TGTTCCTCCCCATCCCTCTGCCAGGTCATGGAGATCTCAGCAGGGTAGAAGCCCAGGGCC 6257
Query 531 CAACA 535
|| ||
Sbjct 6256 CAGCA 6252
>seq1286
Length=65233
Score = 91.5 bits (100), Expect = 1e-13
Identities = 131/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 351 TCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTGCC 410
||||| | ||||| || || ||| | ||||| | | ||| || | | ||||||
Sbjct 15044 TCATGGTGCACATGGCATGTGTATCTCTGCTCCTCCCCAGAAGGCACCACCACAGCTGCC 15103
Query 411 CACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAGTC 470
|||||||| || |||||||| || || || ||||| |||||| || ||| | | ||||
Sbjct 15104 CACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACCAGCTCCATGTCCTGAGTC 15163
Query 471 AGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGGCC 530
||| ||| | || | ||||| || ||| ||| || ||||| |||||||| ||||
Sbjct 15164 TGTTCCTCCCCATCCCTCTGCCAGGTCATGAAAATCTCAGCAGGGTAGAAGCCCAGGGCC 15223
Query 531 CAACA 535
|| ||
Sbjct 15224 CAGCA 15228
Score = 89.7 bits (98), Expect = 4e-13
Identities = 134/188 (71%), Gaps = 2/188 (1%)
Strand=Plus/Plus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||||||| ||||| || || ||| | ||||| | | ||| || | | ||||
Sbjct 53222 CCTCATGGACCACATGGCATGTGTATCTCTGCTCCTCCCCAGAAGGCACCACCACAGCTG 53281
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||||||||| || |||||||| |||| |||||||| |||||| || ||| | | ||
Sbjct 53282 CCCACTTCTGGAAGGTTCCATCCCCAGAAGGTCTGGTCTCCACCAGCTCCATGTCCTGAG 53341
Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAG-AAGCCAGTG 527
|| ||| ||| | || | ||||| || |||| || || ||||| ||| || |||| |
Sbjct 53342 TCTGTTCCTCCCCATCCCTCTGCCAGGTCATGGAGATCTCAGCAGGGTAGAAATCCAG-G 53400
Query 528 GCCCAACA 535
||||| ||
Sbjct 53401 GCCCAGCA 53408
>seq1644
Length=88024
Score = 89.7 bits (98), Expect = 4e-13
Identities = 134/188 (71%), Gaps = 2/188 (1%)
Strand=Plus/Plus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||||||| ||||| || || ||| | ||||| | | ||| || | | ||||
Sbjct 12592 CCTCATGGACCACATGGCATGTGTATCTCTGCTCCTCCCCAGAAGGCACCACCACAGCTG 12651
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||||||||| || ||||||||||| || || ||||| |||||| || ||| | | |
Sbjct 12652 CCCACTTCTGGAAGGTTCCATCTCCTGCAGGCCTGGTCTCCACCAGCTCCATATCCTGAA 12711
Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAG-CCAGTG 527
|||| | ||| | || | ||||| || |||| || || ||||| |||||| |||| |
Sbjct 12712 TCAGATCCTCCCCATCCCTCTGCCAGGTCATGGAGATCTCAGCAGGGTAGAAGTCCAG-G 12770
Query 528 GCCCAACA 535
||||| ||
Sbjct 12771 GCCCAGCA 12778
Score = 82.4 bits (90), Expect = 6e-11
Identities = 141/202 (70%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||||||| | ||||| || || || || | ||| | | ||| || | | ||||
Sbjct 65219 CCTCATGGTACACATGGCATGTGTAATTCTTCTCCTCCCCAGAAGGCACCACCACAGCTG 65278
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||||||||| || |||||||| |||| |||||||| || ||| || ||| | | ||
Sbjct 65279 CCCACTTCTGGAAGGTTCCATCCCCAGAAGGTCTGGTCTCTACCAGCTCCATGTCCTGAG 65338
Query 469 TCAGTTGCT-CTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTG 527
|| ||| || || ||||| | ||||| | ||| ||| ||||| |||||||| |
Sbjct 65339 TCTGTTCCTCCTCCTCCC-TCTGCCAGACCAGGGTGATGAGGGCAGGGTAGAAGCCCAGG 65397
Query 528 GCCCAACATTTTAGTGTTACTT 549
||||| || | || || ||||
Sbjct 65398 GCCCAGCACCTCAGGGTGACTT 65419
>seq2465
Length=42193
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/201 (69%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||||||| | ||||| || || || || | ||| | | ||| || | | ||||
Sbjct 29298 CCTCATGGTACACATGGCATGTGTAATTCTTCTCCTCCCCGGAAGGCACCACCACAGCTG 29357
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||||||||| || |||||||| |||| |||||||| |||||| || ||| | | ||
Sbjct 29358 CCCACTTCTGGAAGGTTCCATCCCCAGAAGGTCTGGTCTCCACCAGCTCCATATCCTGAG 29417
Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528
|| ||| ||| | || | ||||| | ||| ||| ||||| |||||||| ||
Sbjct 29418 TCTGTTCCTCCTCCTCCTTCTGCCAGACCAGGGTGATGAGGGCAGGGTAGAAGCCCAGGG 29477
Query 529 CCCAACATTTTAGTGTTACTT 549
|||| || | || || ||||
Sbjct 29478 CCCAGCACCTCAGGGTGACTT 29498
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/201 (69%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
||||||| | ||||| || || || || | ||| | | ||| || | | ||||
Sbjct 31287 CCTCATGGTACACATGGCATGTGTAATTCTTCTCCTCCCCGGAAGGCACCACCACAGCTG 31346
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||||||||| || |||||||| |||| |||||||| |||||| || ||| | | ||
Sbjct 31347 CCCACTTCTGGAAGGTTCCATCCCCAGAAGGTCTGGTCTCCACCAGCTCCATATCCTGAG 31406
Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528
|| ||| ||| | || | ||||| | ||| ||| ||||| |||||||| ||
Sbjct 31407 TCTGTTCCTCCTCCTCCTTCTGCCAGACCAGGGTGATGAGGGCAGGGTAGAAGCCCAGGG 31466
Query 529 CCCAACATTTTAGTGTTACTT 549
|||| || | || || ||||
Sbjct 31467 CCCAGCACCTCAGGGTGACTT 31487
>seq3450
Length=10440
Score = 82.4 bits (90), Expect = 6e-11
Identities = 129/185 (70%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 351 TCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTGCC 410
||||| | ||||| || || ||| | ||||| | | ||| || | | ||||||
Sbjct 4160 TCATGGTGCACATGGCATGTGTATCTCTGCTCCTCCCCAGAAGGCACCACCACAGCTGCC 4219
Query 411 CACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAGTC 470
|||||||| || |||||||| || || || ||||| |||||| || ||| | | ||||
Sbjct 4220 CACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACCAGCTCCATGTCCTGAGTC 4279
Query 471 AGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGGCC 530
||| ||| | || | | ||| || ||| || || ||||| |||||||| ||||
Sbjct 4280 TGTTCCTCCCCATCCCTCTCCCAGGTCATGAAGATCTCAGCAGGGTAGAAGCCCAGGGCC 4339
Query 531 CAACA 535
|| ||
Sbjct 4340 CAGCA 4344
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397597309091976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |