Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peromyscus_20maniculatus_20bairdii_20[refseq_20GCF_5F000500345.1_202 013-12-03] 30,921 sequences; 2,630,541,020 total letters Query= NC_015049.1 Length=124335 Score E Sequences producing significant alignments: (Bits) Value seq1923 113 4e-20 seq1706 113 4e-20 seq1159 113 4e-20 seq1709 104 2e-17 seq1088 104 2e-17 seq1922 96.9 3e-15 seq1272 95.1 1e-14 seq989 95.1 1e-14 seq870 95.1 1e-14 seq1497 93.3 3e-14 seq2521 91.5 1e-13 seq1286 91.5 1e-13 seq1644 89.7 4e-13 seq2465 84.2 2e-11 seq3450 82.4 6e-11 >seq1923 Length=47214 Score = 113 bits (124), Expect = 4e-20 Identities = 137/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || ||| | ||||| | | |||||| | | |||| Sbjct 7458 CCTCATGGTACACATGGCATGTGTATCTCTGCTCCTCCCCAGAAGGTACCACCACAGCTG 7399 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| ||||| |||||||| |||||| || ||| | | || Sbjct 7398 CCCACTTCTGGAAGGTTCCATCCCCAGCAGGTCTGGTCTCCACCAGCTCCATGTCCTGAG 7339 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 || ||| |||| | || | ||||| || |||| || || ||||| |||||||| || Sbjct 7338 TCTGTTCCTCTCCATCCCTCTGCCAGGTCATGGAGATCTCAGCAGGGTAGAAGCCCAGGG 7279 Query 529 CCCAACA 535 |||| || Sbjct 7278 CCCAGCA 7272 >seq1706 Length=50208 Score = 113 bits (124), Expect = 4e-20 Identities = 137/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | |||||||| || ||| | ||||| | | ||| || | | |||| Sbjct 6483 CCTCATGGTGCACATGACATGTGTATCTCTGCTCCTCCCCAGAAGGCACCACCACAGCTG 6424 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| |||| |||||||| |||||| || ||| | | || Sbjct 6423 CCCACTTCTGGAAGGTTCCATCCCCAGAAGGTCTGGTCTCCACCAGCTCCATGTCCTGAG 6364 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 || ||| ||| | || | ||||| ||||||| ||| || ||||| |||||||| || Sbjct 6363 TCTGTTCCTCCCCATCCCTCTGCCAGGTTATGGAAATCTCAGCAGGGTAGAAGCCCAGGG 6304 Query 529 CCCAACA 535 |||| || Sbjct 6303 CCCAGCA 6297 >seq1159 Length=122000 Score = 113 bits (124), Expect = 4e-20 Identities = 137/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | |||||||| || ||| | ||||| | | ||| || | | |||| Sbjct 14936 CCTCATGGTACACATGACATGTGTATGTCTGCTCCTGCCCAGAAGGCACCACCACAGCTG 14995 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| |||| |||||||| |||||| || ||| | | || Sbjct 14996 CCCACTTCTGGAAGGTTCCATCCCCAGAAGGTCTGGTCTCCACCAGCTCCATGTCCTGAG 15055 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 || ||| ||| | || | ||||| ||||||| || || ||||| ||||||||| || Sbjct 15056 TCTGTTCCTCCCCATCCCTCTGCCAGGTTATGGAGATCTCAGCAGGGTAGAAGCCAAGGG 15115 Query 529 CCCAACA 535 |||| || Sbjct 15116 CCCAGCA 15122 Score = 98.7 bits (108), Expect = 8e-16 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || ||| | ||||| | | ||| || | | | || Sbjct 116746 CCTCATGGTGCACATGGCATGTGTATCTCTGCTCCTCCCCAGAAGGCACAACCAGAGATG 116805 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| |||| |||||||| |||||| || ||| | | || Sbjct 116806 CCCACTTCTGGAAGGTTCCATCCCCAGAAGGTCTGGTCTCCACCAGCTCCATGTCCTGAG 116865 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 || ||| ||| | || | ||||| ||||||| || || ||||| |||||||| || Sbjct 116866 TCTGTTCCTCCCCATCCCTCTGCCAGGTTATGGAGATCTCAGCAGGGTAGAAGCCCAGGG 116925 Query 529 CCCAACA 535 |||| || Sbjct 116926 CCCAGCA 116932 Score = 86.0 bits (94), Expect = 5e-12 Identities = 131/187 (70%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || ||| | ||||| | | ||| || | | |||| Sbjct 77767 CCTCATGGTGCACATGGCATGTGTATCTCTGCTCCTCCCCAGAAGGCACCACCACAGCTG 77826 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| |||| |||||||| |||||| || | | | | | Sbjct 77827 CCCACTTCTGGAAGGTTCCATCCCCAGAAGGTCTGGTCTCCACCAGCTCAATGTCCTGAA 77886 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | | | ||||| || |||| || || ||||| |||||||| || Sbjct 77887 TCAGATCCTCCCCATCTCTCTGCCAGGTCATGGAGATCTCAGCAGGGTAGAAGCCCAGGG 77946 Query 529 CCCAACA 535 |||| || Sbjct 77947 CCCAGCA 77953 >seq1709 Length=58760 Score = 104 bits (114), Expect = 2e-17 Identities = 135/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || ||| | ||||| | | ||| || | | |||| Sbjct 58064 CCTCATGGTGCACATGGCATGTGTATCTCTGCTCCTCCCCAGAAGGCACCACCACAGCTG 58005 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| |||| |||||||| |||||| || ||| | | || Sbjct 58004 CCCACTTCTGGAAGGTTCCATCCCCAGAAGGTCTGGTCTCCACCAGCTCCATGTCCTGAG 57945 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 || ||| ||| | || | ||||| ||||||| || || ||||| |||||||| || Sbjct 57944 TCTGTTCCTCCCCATCCCTCTGCCAGGTTATGGAGATCTCAGCAGGGTAGAAGCCCAGGG 57885 Query 529 CCCAACA 535 |||| || Sbjct 57884 CCCAGCA 57878 >seq1088 Length=669290 Score = 104 bits (114), Expect = 2e-17 Identities = 128/175 (73%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | |||||||| || || || | ||| | ||||| || | | |||| Sbjct 766 CCTCATGGTGCACATGACATGTGTAATTCTTCTCCTCCCCAGCAGGAACCACCACAGCTG 707 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| |||| |||||||| |||||| || ||| | | || Sbjct 706 CCCACTTCTGGAAGGTTCCATCCCCAGAAGGTCTGGTCTCCACCAGCTCCATGTCCTGAG 647 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCC 523 || ||| ||| | || | ||||| ||||||| || || ||||| |||||||| Sbjct 646 TCTGTTCCTCCCCATCCCTCTGCCAGGTTATGGAGATCTCAGCAGGGTAGAAGCC 592 >seq1922 Length=46725 Score = 96.9 bits (106), Expect = 3e-15 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 405 GCTGCCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCA 464 |||||||||||||| || |||||||| || || || ||||| |||||| || ||| | Sbjct 17254 GCTGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACCAGCTCCATGTCC 17195 Query 465 TCAGTCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCA 524 | |||| ||| ||| | || | ||||| ||||||| ||| || ||||| |||||||| Sbjct 17194 TGAGTCTGTTCCTCCCCATCCCTCTGCCAGGTTATGGAAATCTCAGCAGGGTAGAAGCCC 17135 Query 525 GTGGCCCAACA 535 |||||| || Sbjct 17134 AGGGCCCAGCA 17124 >seq1272 Length=521552 Score = 95.1 bits (104), Expect = 1e-14 Identities = 133/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| ||||| ||| | ||||| | | ||| || | | |||| Sbjct 40734 CCTCATGCTGCACATGGCAGGTGTATCTCTGCTCCTCTCCAGAAGGCACCACCACAGCTG 40675 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || || ||||| |||||| || ||| | | | Sbjct 40674 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACCAGCTCCATGTCTTGAA 40615 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||||| || | |||| ||||| || | || || || ||||| |||||||| || Sbjct 40614 TCAGTTCTTCCCCACCCAACTGCCAGGTCAGGGAGATCTCAGCAGGGTAGAAGCCCAGGG 40555 Query 529 CCCAACA 535 |||| || Sbjct 40554 CCCAGCA 40548 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/188 (72%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| ||||| || || ||| | ||||| | | ||| || | | |||| Sbjct 17912 CCTCATGGACCACATGGCATGTGTATCTCTGCTCCTCCCCAGAAGGCACCACCACAGCTG 17853 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| |||| |||||||| |||||| || ||| | | | Sbjct 17852 CCCACTTCTGGAAGGTTCCATCCCCAGAAGGTCTGGTCTCCACCAGCTCCATGTCCTGAA 17793 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAG-CCAGTG 527 |||| | ||| | || | ||||| ||||||| || || ||||| |||||| |||| | Sbjct 17792 TCAGATCCTCCCCATCCCTCTGCCAGGTTATGGAGATCTCAGCAGGGTAGAAGTCCAG-G 17734 Query 528 GCCCAACA 535 ||||| || Sbjct 17733 GCCCAGCA 17726 >seq989 Length=535891 Score = 95.1 bits (104), Expect = 1e-14 Identities = 133/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| ||||| || || ||||| ||||| | | |||||| | | || || Sbjct 186274 CCTCATGCAGCACATGGCATGTGTATTTCTGCTCCTCCCCAGAAGGTACCACCACGGTTG 186215 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || |||||||| || | | ||| | | | Sbjct 186214 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGTCTGGTCTCAATAAGATCCATGTCCTGGG 186155 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || | ||||| || | ||||||||||||||||||| |||| || Sbjct 186154 TCAGATCCTCCTCATCCCTCTGCCAGGTCAGGGTAATGTCCGCAGGATAGCAGCCCAGGG 186095 Query 529 CCCAACA 535 |||| || Sbjct 186094 CCCAGCA 186088 Score = 93.3 bits (102), Expect = 3e-14 Identities = 165/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || ||| | ||||| | | ||| || | | |||| Sbjct 281987 CCTCATGGTGCACATGGCATGTGTATCTCTGCTCCTCCCCAGAAGGCACCGCCACAGCTG 281928 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| ||||||||||| || | |||||||| |||||| || ||| | | | Sbjct 281927 CCCACTTCTGGAAAGTTCCATCCCCTGAAGGTCTGGTCTCCACCAGCTCCATGTCCTGAT 281868 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | | | ||||| || | ||| || |||| |||||||||||| | Sbjct 281867 TCAGGTCCTCCCCATCTGTCTGCCAGGTCAGGGTGATCTCCGAAGGATAGAAGCCCAGAG 281808 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACCTGTG 588 |||| || | || || || | | |||||| | | || |||||| || ||| || Sbjct 281807 CCCAGCACCTCAGGGTGACATCTCCTTCAGGTCTGGGGTGATGGGTCACATGTGCCTTTG 281748 Query 589 G 589 | Sbjct 281747 G 281747 Score = 89.7 bits (98), Expect = 4e-13 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| ||||| || || ||| | ||||||| | ||| || | | |||| Sbjct 141078 CCTCATGCAGCACATGGCATGTGTATCTCTGCTCTTCTCCCGAAGGAACCACCACAGCTG 141019 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || ||||| || || | | ||| | | | Sbjct 141018 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGTCTTGTCTCAATAAGATCCATGTCCTGGG 140959 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || | ||||| || | |||||||||||||||||||||||| || Sbjct 140958 TCAGGTCCTCCTCATCCCTCTGCCAGGTCAGGGTAATGTCCGCAGGATAGAAGCCCAGGG 140899 Query 529 CCCAACA 535 |||| || Sbjct 140898 CCCAGCA 140892 Score = 89.7 bits (98), Expect = 4e-13 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||| ||| | ||||| || || ||| | ||||| | | ||||||| | | |||| Sbjct 261542 CCTGATGCTGCACATGGCACGTGTATCTCTGCTCCTCTCCAGAAGGTACTACCAGAGCTG 261483 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || || ||||| ||||| | ||| | | | Sbjct 261482 CCCACTTCTGGAAGGTTCCATCGCCTGCAGGCCTGGTGTCCACAAGTTCCATGTCCTGGG 261423 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || | ||||| || | ||| ||||| ||||| |||||||| || Sbjct 261422 TCAGATCCTCCCCATCCTTCTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGGG 261363 Query 529 CCCAACA 535 |||| || Sbjct 261362 CCCAGCA 261356 >seq870 Length=403371 Score = 95.1 bits (104), Expect = 1e-14 Identities = 133/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| ||||| || || ||| | ||||| | | ||| || | | |||| Sbjct 10395 CCTCATGGACCACATGGCATGTGTATCTCTGCTCCTCCCCGGAAGGCACCACCACAGCTG 10454 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| |||| |||||||| |||||| || ||| | | || Sbjct 10455 CCCACTTCTGGAAGGTTCCATCCCCAGAAGGTCTGGTCTCCACCAGCTCCATGTCCTGAG 10514 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 || ||| ||| | || | ||||| || |||| || || ||||| |||||||| || Sbjct 10515 TCTGTTCCTCCCCATCCCTCTGCCAGGTCATGGAGATCTCAGCAGGGTAGAAGCCCAGGG 10574 Query 529 CCCAACA 535 |||| || Sbjct 10575 CCCAGCA 10581 Score = 82.4 bits (90), Expect = 6e-11 Identities = 105/145 (72%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 405 GCTGCCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCA 464 |||||||||||||| || |||||||| |||| |||||||| |||||| || || | Sbjct 143120 GCTGCCCACTTCTGGAAGGTTCCATCCCCAGAAGGTCTGGTCTCCACCAGCTCCGTGTCC 143179 Query 465 TCAGTCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCA 524 | |||| ||| ||| | || | ||||| || | ||| ||| |||| |||||||| Sbjct 143180 TGAGTCTGTTCCTCCCCATCCCTCTGCCAGGTCAGGGTGATGAGGACAGGGTAGAAGCCC 143239 Query 525 GTGGCCCAACATTTTAGTGTTACTT 549 |||||| || | || || |||| Sbjct 143240 AGGGCCCAGCACCTCAGGGTGACTT 143264 >seq1497 Length=328657 Score = 93.3 bits (102), Expect = 3e-14 Identities = 125/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 781 TCTAATTTCCTTTTAGAAATTTGAGAGGACATGTCTCTAGCGGTCCAGGTCCTGAGATCT 840 ||||| || | ||||| || || |||| || ||| | | |||||||| | || || Sbjct 324721 TCTAAATTGCGCTTAGAGATCTGTGAGGCCAAGTCCTTTGTGGTCCAGGAGCGCAGGTCG 324662 Query 841 TCATTCAAAGAAATGTAGTCCCTGCCATCATAGGCCTGTTGACAGTAGCCTCGAAGGAGG 900 ||||||| | ||||| ||| |||||||||||||| |||||||| || || | || Sbjct 324661 TCATTCAGGGCGATGTAATCCTGGCCATCATAGGCCTCCTGACAGTACCCGCGGTGCTGG 324602 Query 901 GTTCCATCCGGCCCCACAACACAGCCGGACATCCATTGGAGGGTATGTGGTTCT 954 || |||||||||| | |||||| ||||||| || || || || || ||| Sbjct 324601 CGGCCTTCCGGCCCCAGTTCGCAGCCGTACATCCACTGCAGAGTGTGAGGGTCT 324548 Score = 89.7 bits (98), Expect = 4e-13 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | |||||| || || ||||| |||| | |||||| | | |||| Sbjct 211265 CCTCATGCTGTACATGGCATGTGTATTTCAGCTCCTCTCCAAAAGGTACCACCACAGCTG 211206 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||||||||| ||||| || || |||||||| ||||| || ||| | | | Sbjct 211205 CCCACTTCTGAAAAGTCCCATCCCCTGCAGGTCTGGTCTCCACAAGCTCCATGTCCTGTG 211146 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 | ||| ||| | || | | ||| || | ||| ||||| ||||| ||||| || || Sbjct 211145 CCTGTTCCTCCTCATCCCTCTTCCAGGTCAGGGTGATGTCAGCAGGGTAGAATCCCAGGG 211086 Query 529 CCCAACA 535 |||| || Sbjct 211085 CCCAGCA 211079 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 820 GCGGTCCAGGTCCTGAGATCTTCATTCAAAGAAATGTAGTCCCTGCCATCATAGGCCTGT 879 || ||||| ||| | || || || |||| | ||||| || | ||| || ||||| Sbjct 309940 GCCGTCCACGTCGTCAGGTCGTCGTTCAGGGCGATGTAATCGCGGCCGTCGTAGGCGAAC 309881 Query 880 TGACAGTAGCCTCGAAGGAGGGTTCCATCCGGCCCCACAACACAGCCGGACATCCATTGG 939 |||| ||| || ||||||||| || |||| |||||| ||||||||||||||||| ||| Sbjct 309880 TGACTGTACCCGCGAAGGAGGCGCCCGTCCGACCCCACCACACAGCCGGACATCCACTGG 309821 Query 940 A 940 | Sbjct 309820 A 309820 >seq2521 Length=31182 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 351 TCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTGCC 410 ||||| | ||||| || || ||| | ||||| | | ||| || | | |||||| Sbjct 6436 TCATGGTGCACATGGCATGTGTATCTCTGCTCCTCCCCAGAAGGCACCACCACAGCTGCC 6377 Query 411 CACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAGTC 470 |||||||| || |||||||| || || || ||||| |||||| || ||| | | |||| Sbjct 6376 CACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACCAGCTCCATGTCCTGAGTC 6317 Query 471 AGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGGCC 530 ||| ||| | || | ||||| || |||| || || ||||| |||||||| |||| Sbjct 6316 TGTTCCTCCCCATCCCTCTGCCAGGTCATGGAGATCTCAGCAGGGTAGAAGCCCAGGGCC 6257 Query 531 CAACA 535 || || Sbjct 6256 CAGCA 6252 >seq1286 Length=65233 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 351 TCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTGCC 410 ||||| | ||||| || || ||| | ||||| | | ||| || | | |||||| Sbjct 15044 TCATGGTGCACATGGCATGTGTATCTCTGCTCCTCCCCAGAAGGCACCACCACAGCTGCC 15103 Query 411 CACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAGTC 470 |||||||| || |||||||| || || || ||||| |||||| || ||| | | |||| Sbjct 15104 CACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACCAGCTCCATGTCCTGAGTC 15163 Query 471 AGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGGCC 530 ||| ||| | || | ||||| || ||| ||| || ||||| |||||||| |||| Sbjct 15164 TGTTCCTCCCCATCCCTCTGCCAGGTCATGAAAATCTCAGCAGGGTAGAAGCCCAGGGCC 15223 Query 531 CAACA 535 || || Sbjct 15224 CAGCA 15228 Score = 89.7 bits (98), Expect = 4e-13 Identities = 134/188 (71%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| ||||| || || ||| | ||||| | | ||| || | | |||| Sbjct 53222 CCTCATGGACCACATGGCATGTGTATCTCTGCTCCTCCCCAGAAGGCACCACCACAGCTG 53281 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| |||| |||||||| |||||| || ||| | | || Sbjct 53282 CCCACTTCTGGAAGGTTCCATCCCCAGAAGGTCTGGTCTCCACCAGCTCCATGTCCTGAG 53341 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAG-AAGCCAGTG 527 || ||| ||| | || | ||||| || |||| || || ||||| ||| || |||| | Sbjct 53342 TCTGTTCCTCCCCATCCCTCTGCCAGGTCATGGAGATCTCAGCAGGGTAGAAATCCAG-G 53400 Query 528 GCCCAACA 535 ||||| || Sbjct 53401 GCCCAGCA 53408 >seq1644 Length=88024 Score = 89.7 bits (98), Expect = 4e-13 Identities = 134/188 (71%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| ||||| || || ||| | ||||| | | ||| || | | |||| Sbjct 12592 CCTCATGGACCACATGGCATGTGTATCTCTGCTCCTCCCCAGAAGGCACCACCACAGCTG 12651 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || ||||||||||| || || ||||| |||||| || ||| | | | Sbjct 12652 CCCACTTCTGGAAGGTTCCATCTCCTGCAGGCCTGGTCTCCACCAGCTCCATATCCTGAA 12711 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAG-CCAGTG 527 |||| | ||| | || | ||||| || |||| || || ||||| |||||| |||| | Sbjct 12712 TCAGATCCTCCCCATCCCTCTGCCAGGTCATGGAGATCTCAGCAGGGTAGAAGTCCAG-G 12770 Query 528 GCCCAACA 535 ||||| || Sbjct 12771 GCCCAGCA 12778 Score = 82.4 bits (90), Expect = 6e-11 Identities = 141/202 (70%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || || || | ||| | | ||| || | | |||| Sbjct 65219 CCTCATGGTACACATGGCATGTGTAATTCTTCTCCTCCCCAGAAGGCACCACCACAGCTG 65278 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| |||| |||||||| || ||| || ||| | | || Sbjct 65279 CCCACTTCTGGAAGGTTCCATCCCCAGAAGGTCTGGTCTCTACCAGCTCCATGTCCTGAG 65338 Query 469 TCAGTTGCT-CTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTG 527 || ||| || || ||||| | ||||| | ||| ||| ||||| |||||||| | Sbjct 65339 TCTGTTCCTCCTCCTCCC-TCTGCCAGACCAGGGTGATGAGGGCAGGGTAGAAGCCCAGG 65397 Query 528 GCCCAACATTTTAGTGTTACTT 549 ||||| || | || || |||| Sbjct 65398 GCCCAGCACCTCAGGGTGACTT 65419 >seq2465 Length=42193 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || || || | ||| | | ||| || | | |||| Sbjct 29298 CCTCATGGTACACATGGCATGTGTAATTCTTCTCCTCCCCGGAAGGCACCACCACAGCTG 29357 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| |||| |||||||| |||||| || ||| | | || Sbjct 29358 CCCACTTCTGGAAGGTTCCATCCCCAGAAGGTCTGGTCTCCACCAGCTCCATATCCTGAG 29417 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 || ||| ||| | || | ||||| | ||| ||| ||||| |||||||| || Sbjct 29418 TCTGTTCCTCCTCCTCCTTCTGCCAGACCAGGGTGATGAGGGCAGGGTAGAAGCCCAGGG 29477 Query 529 CCCAACATTTTAGTGTTACTT 549 |||| || | || || |||| Sbjct 29478 CCCAGCACCTCAGGGTGACTT 29498 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || || || | ||| | | ||| || | | |||| Sbjct 31287 CCTCATGGTACACATGGCATGTGTAATTCTTCTCCTCCCCGGAAGGCACCACCACAGCTG 31346 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| |||| |||||||| |||||| || ||| | | || Sbjct 31347 CCCACTTCTGGAAGGTTCCATCCCCAGAAGGTCTGGTCTCCACCAGCTCCATATCCTGAG 31406 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 || ||| ||| | || | ||||| | ||| ||| ||||| |||||||| || Sbjct 31407 TCTGTTCCTCCTCCTCCTTCTGCCAGACCAGGGTGATGAGGGCAGGGTAGAAGCCCAGGG 31466 Query 529 CCCAACATTTTAGTGTTACTT 549 |||| || | || || |||| Sbjct 31467 CCCAGCACCTCAGGGTGACTT 31487 >seq3450 Length=10440 Score = 82.4 bits (90), Expect = 6e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 351 TCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTGCC 410 ||||| | ||||| || || ||| | ||||| | | ||| || | | |||||| Sbjct 4160 TCATGGTGCACATGGCATGTGTATCTCTGCTCCTCCCCAGAAGGCACCACCACAGCTGCC 4219 Query 411 CACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAGTC 470 |||||||| || |||||||| || || || ||||| |||||| || ||| | | |||| Sbjct 4220 CACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACCAGCTCCATGTCCTGAGTC 4279 Query 471 AGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGGCC 530 ||| ||| | || | | ||| || ||| || || ||||| |||||||| |||| Sbjct 4280 TGTTCCTCCCCATCCCTCTCCCAGGTCATGAAGATCTCAGCAGGGTAGAAGCCCAGGGCC 4339 Query 531 CAACA 535 || || Sbjct 4340 CAGCA 4344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397597309091976