Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peromyscus_20maniculatus_20bairdii_20[refseq_20GCF_5F000500345.1_202
013-12-03] 30,921 sequences; 2,630,541,020 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq154 107 2e-18
>seq154
Length=6791889
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317
|| || | ||||||||| || || | ||| ||| |||| || | | ||| | | ||||
Sbjct 1707850 AACACAAGATGAAGGGTGGACTCCTATTGAATACTGTAGTCAGACAAAGTACGGCCATCT 1707791
Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377
|||| |||||||| || || ||| | ||| ||||| || ||||| |||| |||||
Sbjct 1707790 TCCAGCTGCTTACCAGCGAAGCTCAGCCTCTGCTGATCAGGAGGAATTCCTTGCTTATCC 1707731
Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437
|| || || |||||| |||||| ||||| || | ||| || || || ||| |||
Sbjct 1707730 TGGATCTTGGCCTTTACATTTTCTATCGTGTCCGAGGGTTCAACCTCGAGCATGATGGTT 1707671
Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || || | || || || |||||||||||
Sbjct 1707670 TTCCCCGTGAGGGTCTTCACGAATATCTGCAT 1707639
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396129062608797
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |