Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peromyscus_20maniculatus_20bairdii_20[refseq_20GCF_5F000500345.1_202
013-12-03] 30,921 sequences; 2,630,541,020 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq78 84.2 3e-11
>seq78
Length=6419775
Score = 84.2 bits (92), Expect = 3e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 65441 AGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTGAGA 65500
|||||||||||||||| |||||||| ||| || || || ||||| |||||||||||||
Sbjct 5583706 AGAATCCATTTGACTTCATGGAAAATATTTCACTAGAAGGAAAGACAAACTTCTTTGAGA 5583647
Query 65501 AGCGAGTTGGGGACTA 65516
||||||| || || ||
Sbjct 5583646 AGCGAGTGGGCGAATA 5583631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596339018392480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |