Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peromyscus_20maniculatus_20bairdii_20[refseq_20GCF_5F000500345.1_202
013-12-03] 30,921 sequences; 2,630,541,020 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq14539 167 3e-35
seq1038 167 3e-35
seq644 167 3e-35
seq387 167 3e-35
seq180 140 4e-27
>seq14539
Length=6588
Score = 167 bits (184), Expect = 3e-35
Identities = 167/217 (77%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 2061 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 2120
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 2121 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 2180
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 2181 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 2240
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
|||||||||| ||||||||||| | | || ||||||
Sbjct 2241 GCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 2277
>seq1038
Length=538072
Score = 167 bits (184), Expect = 3e-35
Identities = 158/202 (78%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | ||| |||||||| ||||| | |||||| | ||
Sbjct 363618 GCTTGGCCAGCTCCCCGGGCAGCAGCAGACGCACGGCCGTCTGCACCTCGCGGGACGTGA 363559
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| ||| ||||||| || ||||||| |||| |
Sbjct 363558 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCGCTGGCGATGCGCTCGAAAA 363499
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 363498 TGTCGTTGACGAAAGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 363439
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 363438 GCACCTGCTTCAGCACCTTGTA 363417
Score = 161 bits (178), Expect = 1e-33
Identities = 157/202 (78%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | ||| |||||||| ||||| | |||||| | ||
Sbjct 368986 GCTTGGCCAGCTCCCCGGGCAGCAGCAGACGCACGGCCGTCTGCACCTCGCGGGACGTGA 369045
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| ||| ||||||| || ||||||| |||| |
Sbjct 369046 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAGGCCTCGCTGGCGATGCGCTCGAAAA 369105
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 369106 TGTCGTTGACGAAAGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 369165
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 369166 GCACCTGCTTCAGCACCTTGTA 369187
>seq644
Length=862561
Score = 167 bits (184), Expect = 3e-35
Identities = 167/217 (77%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 290389 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 290448
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 290449 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 290508
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 290509 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 290568
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
|||||||||| ||||||||||| | | || ||||||
Sbjct 290569 GCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 290605
Score = 167 bits (184), Expect = 3e-35
Identities = 167/217 (77%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 364436 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 364495
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 364496 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 364555
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 364556 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 364615
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
|||||||||| ||||||||||| | | || ||||||
Sbjct 364616 GCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 364652
Score = 167 bits (184), Expect = 3e-35
Identities = 167/217 (77%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 452775 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 452716
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 452715 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 452656
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 452655 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 452596
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
|||||||||| ||||||||||| | | || ||||||
Sbjct 452595 GCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 452559
Score = 167 bits (184), Expect = 3e-35
Identities = 167/217 (77%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 467734 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 467675
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 467674 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 467615
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 467614 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 467555
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
|||||||||| ||||||||||| | | || ||||||
Sbjct 467554 GCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 467518
Score = 167 bits (184), Expect = 3e-35
Identities = 167/217 (77%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 477444 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 477503
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 477504 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 477563
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 477564 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 477623
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
|||||||||| ||||||||||| | | || ||||||
Sbjct 477624 GCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 477660
Score = 167 bits (184), Expect = 3e-35
Identities = 167/217 (77%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 506090 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 506031
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 506030 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 505971
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 505970 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 505911
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
|||||||||| ||||||||||| | | || ||||||
Sbjct 505910 GCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 505874
Score = 167 bits (184), Expect = 3e-35
Identities = 167/217 (77%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 511027 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 510968
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 510967 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 510908
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 510907 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 510848
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
|||||||||| ||||||||||| | | || ||||||
Sbjct 510847 GCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 510811
Score = 141 bits (156), Expect = 1e-27
Identities = 155/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 40290 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 40231
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 40230 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 40171
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||| | ||||| || ||||||| ||| | |||| |||||||||| ||| ||||
Sbjct 40170 TGTCTGTCACAAAGGAATTCATGATGCTCATGGCCTTGGAGGAGATGCCCGTGTCCGGGT 40111
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548
|||||||||| ||||| || ||||||
Sbjct 40110 GCACCTGCTTCAGCACTTTATAGATG 40085
Score = 141 bits (156), Expect = 1e-27
Identities = 155/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 56153 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 56094
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 56093 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 56034
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||| | ||||| || ||||||| ||| | |||| |||||||||| ||| ||||
Sbjct 56033 TGTCTGTCACAAAGGAATTCATGATGCTCATGGCCTTGGAGGAGATGCCCGTGTCCGGGT 55974
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548
|||||||||| ||||| || ||||||
Sbjct 55973 GCACCTGCTTCAGCACTTTATAGATG 55948
Score = 91.5 bits (100), Expect = 2e-12
Identities = 86/110 (78%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 1254450 ATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATG 1254509
||||| |||| ||| ||||| ||||||||||||| ||| | |||| ||||||
Sbjct 415051 ATGCGCTCGAAGATGCTATTGACGAACGAGTTCATGATGCCCATGGCCTTGGATGAGATG 414992
Query 1254510 CCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
||| |||||||||||||||||| ||||||||||| | | || ||||||
Sbjct 414991 CCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 414942
>seq387
Length=3314187
Score = 167 bits (184), Expect = 3e-35
Identities = 167/217 (77%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 76034 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 76093
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 76094 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 76153
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 76154 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 76213
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
|||||||||| ||||||||||| | | || ||||||
Sbjct 76214 GCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 76250
Score = 167 bits (184), Expect = 3e-35
Identities = 167/217 (77%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 289315 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 289374
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 289375 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 289434
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 289435 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 289494
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
|||||||||| ||||||||||| | | || ||||||
Sbjct 289495 GCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 289531
Score = 167 bits (184), Expect = 3e-35
Identities = 167/217 (77%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 321194 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 321253
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 321254 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 321313
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 321314 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 321373
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
|||||||||| ||||||||||| | | || ||||||
Sbjct 321374 GCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 321410
Score = 167 bits (184), Expect = 3e-35
Identities = 167/217 (77%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 351390 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 351449
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 351450 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 351509
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 351510 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 351569
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
|||||||||| ||||||||||| | | || ||||||
Sbjct 351570 GCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 351606
Score = 167 bits (184), Expect = 3e-35
Identities = 167/217 (77%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 381249 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 381308
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 381309 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 381368
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 381369 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 381428
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
|||||||||| ||||||||||| | | || ||||||
Sbjct 381429 GCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 381465
Score = 167 bits (184), Expect = 3e-35
Identities = 167/217 (77%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 389056 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 388997
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 388996 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 388937
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 388936 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 388877
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
|||||||||| ||||||||||| | | || ||||||
Sbjct 388876 GCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 388840
Score = 161 bits (178), Expect = 1e-33
Identities = 166/217 (76%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | ||| |||||||| ||||||||||| || | ||
Sbjct 84760 GCTTGGCCAGCTCCCCGGGCAGCAGCAGACGCACGGCCGTCTGGATCTCCCGGGACGTGA 84819
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 84820 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 84879
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| ||||||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 84880 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 84939
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
|||||||||| ||||||||||| | | || ||||||
Sbjct 84940 GCACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 84976
Score = 102 bits (112), Expect = 1e-15
Identities = 106/139 (76%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 288836 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 288895
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || |||||| ||||||| |||| |
Sbjct 288896 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 288955
Query 1254463 TGTCGTTGACAAACGAGTT 1254481
|||||||||| ||||||||
Sbjct 288956 TGTCGTTGACGAACGAGTT 288974
>seq180
Length=3519559
Score = 140 bits (154), Expect = 4e-27
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407
|||||||| ||| ||| | ||| |||||||| ||||||||||| || | ||| ||
Sbjct 1211511 GCCAGTTCCCCGGGCAGCAGCAGACGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTC 1211452
Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467
||||||||| | |||||||| || |||||| ||||||| |||| |||||
Sbjct 1211451 GAGCGCTTGTTGTAATGCGCCAGGCGCGAAGCCTCGCCTGCGATGCGCTCGAAGATGTCA 1211392
Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527
|| ||||| || ||||||| ||| | |||| ||||||||| |||||||||||||
Sbjct 1211391 TTAACAAAGGAATTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACC 1211332
Query 1254528 TGCTTGAGCACCTTGTA 1254544
||||| |||||||||||
Sbjct 1211331 TGCTTCAGCACCTTGTA 1211315
Score = 140 bits (154), Expect = 4e-27
Identities = 152/202 (75%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| || | ||
Sbjct 1263801 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 1263742
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| ||| |||||| ||||||| |||| |
Sbjct 1263741 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGGGAAGCCTCGCCCGCGATGCGCTCGAAGA 1263682
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || || |||||||||| ||| | |||| ||||| || ||| ||||
Sbjct 1263681 TGTCGTTCACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATACCGGTGTCCGGGT 1263622
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||| ||||| |||||||||||
Sbjct 1263621 GCACTTGCTTCAGCACCTTGTA 1263600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6104601677936957
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |