Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peromyscus_20maniculatus_20bairdii_20[refseq_20GCF_5F000500345.1_202 013-12-03] 30,921 sequences; 2,630,541,020 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq14539 219 7e-51 seq1038 219 7e-51 seq644 219 7e-51 seq387 219 7e-51 seq180 201 2e-45 seq498 122 1e-21 >seq14539 Length=6588 Score = 219 bits (242), Expect = 7e-51 Identities = 195/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 2022 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 2081 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| ||||||||||| |||| ||| || ||||||||| | Sbjct 2082 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 2141 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| |||| ||||||||||| |||||||||| Sbjct 2142 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 2201 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| |||||||||||||||||| |||||||||| Sbjct 2202 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 2261 Query 1485710 AAAC 1485713 | || Sbjct 2262 ACAC 2265 Score = 87.8 bits (96), Expect = 3e-11 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 6516 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 6575 Query 1485530 TGATCAGGCGCAC 1485542 | ||||||||| Sbjct 6576 GCAGCAGGCGCAC 6588 >seq1038 Length=538072 Score = 219 bits (242), Expect = 7e-51 Identities = 202/256 (79%), Gaps = 0/256 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| |||||||| |||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 363657 TGTATTTGGTGACAGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 363598 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| |||||||| ||||| | |||||||| ||| || ||||||||| | Sbjct 363597 GCAGCAGACGCACGGCCGTCTGCACCTCGCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 363538 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||||||||||| ||||||| || ||||||| |||| ||||||||||| || ||||||| Sbjct 363537 GCGCCAGGCGGGAGGCCTCGCTGGCGATGCGCTCGAAAATGTCGTTGACGAAAGAGTTCA 363478 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| |||||||||||||||||| |||||||||| Sbjct 363477 TGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 363418 Query 1485710 AAACAAAGGACGAGTA 1485725 | ||| || ||||| Sbjct 363417 ACACATAGATGGAGTA 363402 Score = 214 bits (236), Expect = 3e-49 Identities = 201/256 (79%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| |||||||| |||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 368947 TGTATTTGGTGACAGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 369006 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| |||||||| ||||| | |||||||| ||| || ||||||||| Sbjct 369007 GCAGCAGACGCACGGCCGTCTGCACCTCGCGGGACGTGATGGTCGAGCGCTTGTTGTAAT 369066 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||||||||||| ||||||| || ||||||| |||| ||||||||||| || ||||||| Sbjct 369067 GCGCCAGGCGGGAGGCCTCGCTGGCGATGCGCTCGAAAATGTCGTTGACGAAAGAGTTCA 369126 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| |||||||||||||||||| |||||||||| Sbjct 369127 TGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 369186 Query 1485710 AAACAAAGGACGAGTA 1485725 | ||| || ||||| Sbjct 369187 ACACATAGATGGAGTA 369202 >seq644 Length=862561 Score = 219 bits (242), Expect = 7e-51 Identities = 195/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 290350 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 290409 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| ||||||||||| |||| ||| || ||||||||| | Sbjct 290410 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 290469 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| |||| ||||||||||| |||||||||| Sbjct 290470 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 290529 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| |||||||||||||||||| |||||||||| Sbjct 290530 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 290589 Query 1485710 AAAC 1485713 | || Sbjct 290590 ACAC 290593 Score = 219 bits (242), Expect = 7e-51 Identities = 195/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 364397 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 364456 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| ||||||||||| |||| ||| || ||||||||| | Sbjct 364457 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 364516 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| |||| ||||||||||| |||||||||| Sbjct 364517 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 364576 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| |||||||||||||||||| |||||||||| Sbjct 364577 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 364636 Query 1485710 AAAC 1485713 | || Sbjct 364637 ACAC 364640 Score = 219 bits (242), Expect = 7e-51 Identities = 195/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 452814 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 452755 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| ||||||||||| |||| ||| || ||||||||| | Sbjct 452754 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 452695 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| |||| ||||||||||| |||||||||| Sbjct 452694 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 452635 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| |||||||||||||||||| |||||||||| Sbjct 452634 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 452575 Query 1485710 AAAC 1485713 | || Sbjct 452574 ACAC 452571 Score = 219 bits (242), Expect = 7e-51 Identities = 195/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 467773 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 467714 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| ||||||||||| |||| ||| || ||||||||| | Sbjct 467713 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 467654 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| |||| ||||||||||| |||||||||| Sbjct 467653 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 467594 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| |||||||||||||||||| |||||||||| Sbjct 467593 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 467534 Query 1485710 AAAC 1485713 | || Sbjct 467533 ACAC 467530 Score = 219 bits (242), Expect = 7e-51 Identities = 195/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 477405 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 477464 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| ||||||||||| |||| ||| || ||||||||| | Sbjct 477465 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 477524 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| |||| ||||||||||| |||||||||| Sbjct 477525 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 477584 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| |||||||||||||||||| |||||||||| Sbjct 477585 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 477644 Query 1485710 AAAC 1485713 | || Sbjct 477645 ACAC 477648 Score = 219 bits (242), Expect = 7e-51 Identities = 195/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 506129 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 506070 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| ||||||||||| |||| ||| || ||||||||| | Sbjct 506069 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 506010 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| |||| ||||||||||| |||||||||| Sbjct 506009 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 505950 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| |||||||||||||||||| |||||||||| Sbjct 505949 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 505890 Query 1485710 AAAC 1485713 | || Sbjct 505889 ACAC 505886 Score = 219 bits (242), Expect = 7e-51 Identities = 195/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 511066 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 511007 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| ||||||||||| |||| ||| || ||||||||| | Sbjct 511006 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 510947 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| |||| ||||||||||| |||||||||| Sbjct 510946 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 510887 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| |||||||||||||||||| |||||||||| Sbjct 510886 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 510827 Query 1485710 AAAC 1485713 | || Sbjct 510826 ACAC 510823 Score = 192 bits (212), Expect = 9e-43 Identities = 187/241 (78%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 40329 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 40270 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| ||||||||||| |||| ||| || ||||||||| | Sbjct 40269 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 40210 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| |||| ||||| | ||||| || |||| Sbjct 40209 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCTGTCACAAAGGAATTCA 40150 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||||| ||| |||||||||||||| ||||| || | Sbjct 40149 TGATGCTCATGGCCTTGGAGGAGATGCCCGTGTCCGGGTGCACCTGCTTCAGCACTTTAT 40090 Query 1485710 A 1485710 | Sbjct 40089 A 40089 Score = 192 bits (212), Expect = 9e-43 Identities = 187/241 (78%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 56192 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 56133 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| ||||||||||| |||| ||| || ||||||||| | Sbjct 56132 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 56073 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| |||| ||||| | ||||| || |||| Sbjct 56072 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCTGTCACAAAGGAATTCA 56013 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||||||| ||| |||||||||||||| ||||| || | Sbjct 56012 TGATGCTCATGGCCTTGGAGGAGATGCCCGTGTCCGGGTGCACCTGCTTCAGCACTTTAT 55953 Query 1485710 A 1485710 | Sbjct 55952 A 55952 Score = 87.8 bits (96), Expect = 3e-11 Identities = 130/182 (71%), Gaps = 8/182 (4%) Strand=Plus/Minus Query 1485534 CAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGT--GTTGCGCTTGTTAGTGCGC 1485591 |||||||||||| |||||||||| | | ||| || ||||| || || |||| Sbjct 415129 CAGGCGCACGGCCGTCTGGATCTACTGAGATGTGATGGTCGGTTGCTTTTTGTAATGCG- 415071 Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 ||| | | |||| | ||||| |||| ||| ||||| |||||||||||| Sbjct 415070 GCCCGACT-----CCTCTAATGCTATGCGCTCGAAGATGCTATTGACGAACGAGTTCATG 415016 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAA 1485711 || ||| | ||| ||||||||| |||||||||||||||||| ||||||||||| Sbjct 415015 ATGCCCATGGCCTTGGATGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGTAC 414956 Query 1485712 AC 1485713 || Sbjct 414955 AC 414954 >seq387 Length=3314187 Score = 219 bits (242), Expect = 7e-51 Identities = 195/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 75995 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 76054 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| ||||||||||| |||| ||| || ||||||||| | Sbjct 76055 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 76114 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| |||| ||||||||||| |||||||||| Sbjct 76115 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 76174 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| |||||||||||||||||| |||||||||| Sbjct 76175 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 76234 Query 1485710 AAAC 1485713 | || Sbjct 76235 ACAC 76238 Score = 219 bits (242), Expect = 7e-51 Identities = 195/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 289276 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 289335 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| ||||||||||| |||| ||| || ||||||||| | Sbjct 289336 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 289395 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| |||| ||||||||||| |||||||||| Sbjct 289396 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 289455 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| |||||||||||||||||| |||||||||| Sbjct 289456 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 289515 Query 1485710 AAAC 1485713 | || Sbjct 289516 ACAC 289519 Score = 219 bits (242), Expect = 7e-51 Identities = 195/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 321155 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 321214 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| ||||||||||| |||| ||| || ||||||||| | Sbjct 321215 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 321274 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| |||| ||||||||||| |||||||||| Sbjct 321275 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 321334 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| |||||||||||||||||| |||||||||| Sbjct 321335 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 321394 Query 1485710 AAAC 1485713 | || Sbjct 321395 ACAC 321398 Score = 219 bits (242), Expect = 7e-51 Identities = 195/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 351351 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 351410 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| ||||||||||| |||| ||| || ||||||||| | Sbjct 351411 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 351470 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| |||| ||||||||||| |||||||||| Sbjct 351471 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 351530 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| |||||||||||||||||| |||||||||| Sbjct 351531 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 351590 Query 1485710 AAAC 1485713 | || Sbjct 351591 ACAC 351594 Score = 219 bits (242), Expect = 7e-51 Identities = 195/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 381210 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 381269 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| ||||||||||| |||| ||| || ||||||||| | Sbjct 381270 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 381329 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| |||| ||||||||||| |||||||||| Sbjct 381330 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 381389 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| |||||||||||||||||| |||||||||| Sbjct 381390 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 381449 Query 1485710 AAAC 1485713 | || Sbjct 381450 ACAC 381453 Score = 219 bits (242), Expect = 7e-51 Identities = 195/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 389095 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 389036 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| ||||||||||| |||| ||| || ||||||||| | Sbjct 389035 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 388976 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| |||| ||||||||||| |||||||||| Sbjct 388975 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 388916 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| |||||||||||||||||| |||||||||| Sbjct 388915 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 388856 Query 1485710 AAAC 1485713 | || Sbjct 388855 ACAC 388852 Score = 210 bits (232), Expect = 3e-48 Identities = 193/244 (79%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 84721 TGTACTTGGTGACAGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 84780 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| |||||||| ||||||||||| |||| ||| || ||||||||| | Sbjct 84781 GCAGCAGACGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 84840 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| |||| ||||||||||| |||||||||| Sbjct 84841 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 84900 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| |||||||||||||||||| |||||||||| Sbjct 84901 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 84960 Query 1485710 AAAC 1485713 | || Sbjct 84961 ACAC 84964 Score = 159 bits (176), Expect = 5e-33 Identities = 142/178 (80%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| ||| Sbjct 288797 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 288856 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| ||||||||||| |||| ||| || ||||||||| | Sbjct 288857 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 288916 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 |||||||||| |||||| ||||||| |||| ||||||||||| |||||||| Sbjct 288917 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTT 288974 >seq180 Length=3519559 Score = 201 bits (222), Expect = 2e-45 Identities = 191/244 (78%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||||| ||||||| || ||| ||| Sbjct 1263840 TGTACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCCCCGGGCA 1263781 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| ||||||||||| |||| ||| || ||||||||| | Sbjct 1263780 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAGT 1263721 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||||||||||| |||||| ||||||| |||| |||||||| || || ||||||| Sbjct 1263720 GCGCCAGGCGGGAAGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTCACGAAGGAGTTCA 1263661 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||| || ||| |||||||| ||||| |||||||||| Sbjct 1263660 TGATGCCCATGGCCTTGGACGAGATACCGGTGTCCGGGTGCACTTGCTTCAGCACCTTGT 1263601 Query 1485710 AAAC 1485713 | || Sbjct 1263600 ACAC 1263597 Score = 192 bits (212), Expect = 9e-43 Identities = 189/244 (77%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || || |||||| | |||||||| ||| ||| Sbjct 1211555 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACAGCGTGCTTAGCCAGTTCCCCGGGCA 1211496 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| |||||||| ||||||||||| |||| ||| || ||||||||| Sbjct 1211495 GCAGCAGACGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAAT 1211436 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| |||| ||||| || ||||| || |||| Sbjct 1211435 GCGCCAGGCGCGAAGCCTCGCCTGCGATGCGCTCGAAGATGTCATTAACAAAGGAATTCA 1211376 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| |||||||||||||||||| |||||||||| Sbjct 1211375 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 1211316 Query 1485710 AAAC 1485713 | || Sbjct 1211315 ACAC 1211312 >seq498 Length=2542268 Score = 122 bits (134), Expect = 1e-21 Identities = 229/332 (69%), Gaps = 16/332 (5%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || ||||| | ||||| | || ||| ||| ||||||||||| || || ||||| Sbjct 2186656 CCCTCGTCTCTGCTGATAAGCTCATTGGAAAATGTAAGGCCGGGCATCAGTCCCTGCTTC 2186715 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| || || | |||| || ||| |||||||| || |||||||||||| Sbjct 2186716 TTGAGCCAGAATATTGATGTGAAAGAACC---GAAGAAGATGCCTTCCACGGCGGCAAAG 2186772 Query 794461 CCGACGAGCCG--CTCGGCAAAAGTGTCCAGGCCCTCTTTGTTG---ATCCACTTCATCG 794515 |||| | || ||| | | ||| || ||||||||| ||||| || | Sbjct 2186773 GCGACAACACGTTCTCTGTA----TGT--AG--CCTCTTTGTCCCAAATCCAACGCAAGG 2186824 Query 794516 CCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCT 794575 |||| || ||||| ||| |||| || |||| ||| || || || ||||| | ||| Sbjct 2186825 CCCAGTCGGCCTTCTTCTTCACAGAAGGCATCGTTTCTATAGCAATGAAGAGATACTCCC 2186884 Query 794576 TCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGT 794635 |||| | || || | ||||||||| || ||||| ||| | || || || |||| Sbjct 2186885 TCTCCTTAGAATCTTTAATGTAGGTGTCAATAAGGAGACTGTACATTTCAGAATGTATGT 2186944 Query 794636 TTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 |||| ||||| || ||||||||||| || ||| Sbjct 2186945 TTTCCATGGCAATTTGGAAGCCATAGAAACAG 2186976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7912957192199319