Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peromyscus_20maniculatus_20bairdii_20[refseq_20GCF_5F000500345.1_202 013-12-03] 30,921 sequences; 2,630,541,020 total letters Query= NC_022563.1 Length=148803 Score E Sequences producing significant alignments: (Bits) Value seq1497 82.4 7e-11 >seq1497 Length=328657 Score = 82.4 bits (90), Expect = 7e-11 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 6552 GTTGCTGTCGAAGCGGACGATCTCCGTGTCGTCCACGTAGCCCACGACCAGGTACCGGGG 6611 || |||||||||||| ||||||| |||||||||||||||||| ||||| | ||||||||| Sbjct 279873 GTCGCTGTCGAAGCGCACGATCTGCGTGTCGTCCACGTAGCCGACGACGATGTACCGGGG 279814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475857603971080