Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peromyscus_20maniculatus_20bairdii_20[refseq_20GCF_5F000500345.1_202
013-12-03] 30,921 sequences; 2,630,541,020 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq366 82.4 6e-11
>seq366
Length=4409749
Score = 82.4 bits (90), Expect = 6e-11
Identities = 90/120 (75%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 107649 GATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAG 107708
||||| |||||| | || || |||||||| || || | ||| || || |||||||||
Sbjct 1116340 GATAAGGAAGGCATCCCACCAGACCAGCAGAGGCTGATATTTGCCGGAAAGCAGCTGGAG 1116281
Query 107709 GACGCCAAAACAATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768
|| | | | || || ||||||||||||| || || |||| || |||||| ||||| ||
Sbjct 1116280 GATGGCCACACCCTGTCGGACTACAACATCCAGAAAGAGTTCACCTTGCACCTGGTGCTG 1116221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398726483402569
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |